Graphene oxide (GO) is a derivative of graphene nanosheet which is the most promising material of... more Graphene oxide (GO) is a derivative of graphene nanosheet which is the most promising material of the decade in biomedical research. In particular, it has been known as an antimicrobial nanomaterial with good biocompatibility. In this study, we have synthesized and characterize GO and checked its antimicrobial property against different Gram-negative and Gram-positive multi drug resistant (MDR) hospital superbugs grown in solid agar-based nutrient plates with and without human serum through the utilization of agar well diffusion method, live/dead fluorescent staining and genotoxicity analysis. The main focus of the antimicrobial activity analysis is to distinguish the killing performance of GO in artificial and blood containing media because after injection into the bloodstream the activity of GO may be modified by adsorption of blood proteins or other biomolecules. No significant changes in antibacterial activity were found in these two different conditions. We also compare the bac...
Graphene oxide (GO) is a derivative of graphene nanosheet which is the most promising material of... more Graphene oxide (GO) is a derivative of graphene nanosheet which is the most promising material of the decade in biomedical research. In particular, it has been known as an antimicrobial nanomaterial with good biocompatibility. In this study, we have synthesized and characterize GO and checked its antimicrobial property against different Gram-negative and Gram-positive multidrug drug resistant (MDR) hospital superbugs grown in solid agar-based nutrient plates with and without human serum through the utilization of agar well diffusion method, live/dead fluorescent staining and genotoxicity analysis. No significant changes in antibacterial activity were found in these two different conditions. We also compare the bactericidal capability of GO with some commonly administrated antibiotics and in all cases the degree of inhibition is found to be higher. The data presented here are novel and show that GO is an effective bactericidal agents against different superbugs and can be used as a f...
Photocatalytic dye degradation efficiency of Ag·NiMn2O4 at pH 4 was 91%; at pH 9, 77% and 95% in ... more Photocatalytic dye degradation efficiency of Ag·NiMn2O4 at pH 4 was 91%; at pH 9, 77% and 95% in presence of H2O2 and at pH 7, 50%. Assembled Ag·NiMn2O4 nanomaterials/binder/GCE, as m-THyd sensor showed considerable sensitivity, DL, LDR, response time, reproducibility etc.
Graphene oxide (GO) is a derivative of graphene nanosheet which is the most promising material of... more Graphene oxide (GO) is a derivative of graphene nanosheet which is the most promising material of the decade in biomedical research. In particular, it has been known as an antimicrobial nanomaterial with good biocompatibility. In this study, we have synthesized and characterize GO and checked its antimicrobial property against different Gram-negative and Gram-positive multidrug drug resistant (MDR) hospital superbugs grown in solid agar-based nutrient plates with and without human serum through the utilization of agar well diffusion method, live/dead fluorescent staining and genotoxicity analysis. No significant changes in antibacterial activity were found in these two different conditions. We also compare the bactericidal capability of GO with some commonly administered antibiotics and in all cases the degree of inhibition is found to be higher. The data presented here are novel and show that GO is an effective bactericidal agent against different superbugs and can be used as a fut...
Antimicrobial resistance poses a threat in the treatment of infectious diseases in Bangladesh as ... more Antimicrobial resistance poses a threat in the treatment of infectious diseases in Bangladesh as well as in the world. Multidrug-resistant (MDR) Enterobacteriaceae, the most common cause of one such infectious disease, urinary tract infection (UTI), has contributed to the escalating problem of selecting empiric antibiotics against UTIs. The aim of this study was to investigate the presence of the efflux pump in MDR Escherichia coli isolates from UTI in the North-East region of Bangladesh, to isolate and characterize the AcrAB-TolC efflux pump genes of these locally isolated strains and to do mutation analysis of the efflux pump repressor AcrR gene to understand the AcrAB-TolC efflux pump mechanism. In the presence of omeprazole, an efflux pump inhibitor, every MDR E. coli isolate showed increased susceptibility to at least 1 of the 7 antibiotics investigated, indicating that efflux pump might be involved in their antibiotic resistance. Omeprazole decreased the minimum inhibitory con...
Journal of Environmental Chemical Engineering, 2020
Abstract A novel multifunctional material with high dye degradation efficiency, photoluminescence... more Abstract A novel multifunctional material with high dye degradation efficiency, photoluminescence (PL) and electro-sensing ability was synthesized with a simple co-precipitation method followed by thermal calcination. The dye degradation efficiency was 98% at pH 9 within only 60 min. The material also showed excellent anti-bacterial activity against both Gram positive and Gram negative bacteria in the presence and absence of light. For the electro-sensor application of Ag2O·SnO2·TiO2, glassy carbon electrode (GCE) was modified by the Ag2O·SnO2·TiO2 nanomaterials at room conditions. The resulting Ag2O·SnO2·TiO2/Nafion/GCE sensor assembly was employed to determine Thiourea (TU) by a simple and reliable electrochemical approach at low-potential. Hazardous TU was selected as the target analyte by the selectivity study. In the investigative study, for the TU concentrations of 0.10 nM to 0.10 M, the calibration plot was found linear (r2 = 0.9997). Calculated sensitivity and limit of detection values were obtained as 4.2913 μAμM−1 cm−2 and 2.3 ± 0.1 pM (S/N = 3) respectively.
Vibriosis caused by luminous Vibrio species is one of the biggest challenges to shrimp industry i... more Vibriosis caused by luminous Vibrio species is one of the biggest challenges to shrimp industry in Bangladesh. This study aimed to characterize whole microbial communities from Vibrio-infected black tiger shrimp (Penaeus monodon) using 16S rRNA-based amplicon sequencing. A total of 36 disease-free and infected shrimp were collected from six different hatcheries in Bagerhat, Bangladesh. A final pool of 12 samples (n = 6) was created by homogenization of the hepatopancreas samples from three shrimps collected from each hatchery for the same group. The amplicon sequencing data revealed significant (p < .05) decrease of alpha diversity measurements and subsequent effects (p < .05) on the hepatopancreas microbiota in the infected group, compared to control shrimp. Proteobateria and Aeromonas were the most dominant bacteria at phylum and genus level in both groups and identified as core microbiota in the community. Two bacterial groups at phyla level and eight at genus level were fo...
The coronavirus disease 2019 (COVID-19), a pandemic declared by the World Health Organization on ... more The coronavirus disease 2019 (COVID-19), a pandemic declared by the World Health Organization on March 11, 2020, is caused by the infection of highly transmissible species of a novel coronavirus called severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2). As of July 25, 2021, there are 194,372,584 cases and 4,167,937 deaths with high variability in clinical manifestations, disease burden, and post-disease complications among different people around the globe. Overall, COVID-19 is manifested as mild to moderate in almost 90% of the cases and only the rest 10% of the cases need hospitalization. However, patients with older age and those having different comorbidities have made worst the pandemic scenario. The variability of pathological consequences and clinical manifestations of COVID-19 is associated with differential host–SARS-CoV-2 interactions, which are influenced by the factors that originated from the SARS-CoV-2 and the host. These factors usually include the genomic a...
Major intrinsic proteins (MIPs), commonly known as aquaporins, facilitate the membrane diffusion ... more Major intrinsic proteins (MIPs), commonly known as aquaporins, facilitate the membrane diffusion of water and some other non- polar solutes. MIPs might be involved in host-pathogen interactions. Herein, we identified 17, 24, 27, 19, 19, and 22 full-length MIPs, respectively, in the genomes of six Phytophthora species, P. infestans, P. parasitica, P. sojae, P. ramorum, P. capsici, and P. cinnamomi. These Phytophthora species are devastating plant pathogens and members of oomycetes, a distinct lineage of fungus-like eukaryotic microbes. Phylogenetic analysis showed that the Phytophthora MIPs (PMIPs) formed a completely distinct clade from their counterparts in other taxa and were clustered into nine subgroups. Sequence and structural properties indicated that the primary selectivity-related constrictions, including aromatic arginine (ar/R) selectivity filter and Froger’s positions in PMIPs were distinct from those in other taxa. The substitutions in the conserved Asn-Pro-Ala motifs in...
Covid-19, a serious respiratory complications caused by SARS-CoV-2 has become one of the global t... more Covid-19, a serious respiratory complications caused by SARS-CoV-2 has become one of the global threat to human healthcare system. The present study evaluated the possibility of plant originated approved 117 therapeutics against the main protease protein (MPP), RNA-dependent RNA polymerase (RdRp) and spike protein (S) of SARS-CoV-2 including drug surface analysis by using molecular docking through drug repurposing approaches. The molecular interaction study revealed that Rifampin (-16.3 kcal/mol) were topmost inhibitor of MPP where Azobechalcone were found most potent plant therapeutics for blocking the RdRp (-15.9 kcal /mol) and S (-14.4 kcal/mol) protein of SARS-CoV-2. After the comparative analysis of all docking results, Azobechalcone, Rifampin, Isolophirachalcone, Tetrandrine and Fangchinoline were exhibited as the most potential inhibitory plant compounds for targeting the key proteins of SARS-CoV-2. However, amino acid positions; H41, C145, and M165 of MPP played crucial role...
The present global COVID-19 pandemic caused by the noble pleomorphic severe acute respiratory syn... more The present global COVID-19 pandemic caused by the noble pleomorphic severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has created a vulnerable situation in the global healthcare and economy. In this pandemic situation, researchers all around the world are trying their level best to find suitable therapeutics from various sources to combat against the SARS-CoV-2. To date, numerous bioactive compounds from different sources have been tested to control many viral diseases. However, microbial metabolites are advantageous for drug development over metabolites from other sources. We herein retrieved and reviewed literatures from PubMed, Scopus and Google relevant to antiviral microbial metabolites by searching with the keywords “antiviral microbial metabolites,” “microbial metabolite against virus,” “microorganism with antiviral activity,” “antiviral medicine from microbial metabolite,” “antiviral bacterial metabolites,” “antiviral fungal metabolites,” “antiviral metabolites f...
Ag·SrSnO3 NRs is an excellent photocatalyst, kills both Gram positive and Gram negative bacteria.... more Ag·SrSnO3 NRs is an excellent photocatalyst, kills both Gram positive and Gram negative bacteria. The 2,4-DAPHyd sensor fabricated by layered Ag·SrSnO3 NRs onto GCE shows high sensitivity (7.5854 μA μM−1 cm−2); LDR, 0.1 nM~0.01 mM & LOD, 96.13 ± 4.81 pM.
Graphene oxide (GO) is a derivative of graphene nanosheet which is the most promising material of... more Graphene oxide (GO) is a derivative of graphene nanosheet which is the most promising material of the decade in biomedical research. In particular, it has been known as an antimicrobial nanomaterial with good biocompatibility. In this study, we have synthesized and characterize GO and checked its antimicrobial property against different Gram-negative and Gram-positive multi drug resistant (MDR) hospital superbugs grown in solid agar-based nutrient plates with and without human serum through the utilization of agar well diffusion method, live/dead fluorescent staining and genotoxicity analysis. The main focus of the antimicrobial activity analysis is to distinguish the killing performance of GO in artificial and blood containing media because after injection into the bloodstream the activity of GO may be modified by adsorption of blood proteins or other biomolecules. No significant changes in antibacterial activity were found in these two different conditions. We also compare the bac...
Graphene oxide (GO) is a derivative of graphene nanosheet which is the most promising material of... more Graphene oxide (GO) is a derivative of graphene nanosheet which is the most promising material of the decade in biomedical research. In particular, it has been known as an antimicrobial nanomaterial with good biocompatibility. In this study, we have synthesized and characterize GO and checked its antimicrobial property against different Gram-negative and Gram-positive multidrug drug resistant (MDR) hospital superbugs grown in solid agar-based nutrient plates with and without human serum through the utilization of agar well diffusion method, live/dead fluorescent staining and genotoxicity analysis. No significant changes in antibacterial activity were found in these two different conditions. We also compare the bactericidal capability of GO with some commonly administrated antibiotics and in all cases the degree of inhibition is found to be higher. The data presented here are novel and show that GO is an effective bactericidal agents against different superbugs and can be used as a f...
Photocatalytic dye degradation efficiency of Ag·NiMn2O4 at pH 4 was 91%; at pH 9, 77% and 95% in ... more Photocatalytic dye degradation efficiency of Ag·NiMn2O4 at pH 4 was 91%; at pH 9, 77% and 95% in presence of H2O2 and at pH 7, 50%. Assembled Ag·NiMn2O4 nanomaterials/binder/GCE, as m-THyd sensor showed considerable sensitivity, DL, LDR, response time, reproducibility etc.
Graphene oxide (GO) is a derivative of graphene nanosheet which is the most promising material of... more Graphene oxide (GO) is a derivative of graphene nanosheet which is the most promising material of the decade in biomedical research. In particular, it has been known as an antimicrobial nanomaterial with good biocompatibility. In this study, we have synthesized and characterize GO and checked its antimicrobial property against different Gram-negative and Gram-positive multidrug drug resistant (MDR) hospital superbugs grown in solid agar-based nutrient plates with and without human serum through the utilization of agar well diffusion method, live/dead fluorescent staining and genotoxicity analysis. No significant changes in antibacterial activity were found in these two different conditions. We also compare the bactericidal capability of GO with some commonly administered antibiotics and in all cases the degree of inhibition is found to be higher. The data presented here are novel and show that GO is an effective bactericidal agent against different superbugs and can be used as a fut...
Antimicrobial resistance poses a threat in the treatment of infectious diseases in Bangladesh as ... more Antimicrobial resistance poses a threat in the treatment of infectious diseases in Bangladesh as well as in the world. Multidrug-resistant (MDR) Enterobacteriaceae, the most common cause of one such infectious disease, urinary tract infection (UTI), has contributed to the escalating problem of selecting empiric antibiotics against UTIs. The aim of this study was to investigate the presence of the efflux pump in MDR Escherichia coli isolates from UTI in the North-East region of Bangladesh, to isolate and characterize the AcrAB-TolC efflux pump genes of these locally isolated strains and to do mutation analysis of the efflux pump repressor AcrR gene to understand the AcrAB-TolC efflux pump mechanism. In the presence of omeprazole, an efflux pump inhibitor, every MDR E. coli isolate showed increased susceptibility to at least 1 of the 7 antibiotics investigated, indicating that efflux pump might be involved in their antibiotic resistance. Omeprazole decreased the minimum inhibitory con...
Journal of Environmental Chemical Engineering, 2020
Abstract A novel multifunctional material with high dye degradation efficiency, photoluminescence... more Abstract A novel multifunctional material with high dye degradation efficiency, photoluminescence (PL) and electro-sensing ability was synthesized with a simple co-precipitation method followed by thermal calcination. The dye degradation efficiency was 98% at pH 9 within only 60 min. The material also showed excellent anti-bacterial activity against both Gram positive and Gram negative bacteria in the presence and absence of light. For the electro-sensor application of Ag2O·SnO2·TiO2, glassy carbon electrode (GCE) was modified by the Ag2O·SnO2·TiO2 nanomaterials at room conditions. The resulting Ag2O·SnO2·TiO2/Nafion/GCE sensor assembly was employed to determine Thiourea (TU) by a simple and reliable electrochemical approach at low-potential. Hazardous TU was selected as the target analyte by the selectivity study. In the investigative study, for the TU concentrations of 0.10 nM to 0.10 M, the calibration plot was found linear (r2 = 0.9997). Calculated sensitivity and limit of detection values were obtained as 4.2913 μAμM−1 cm−2 and 2.3 ± 0.1 pM (S/N = 3) respectively.
Vibriosis caused by luminous Vibrio species is one of the biggest challenges to shrimp industry i... more Vibriosis caused by luminous Vibrio species is one of the biggest challenges to shrimp industry in Bangladesh. This study aimed to characterize whole microbial communities from Vibrio-infected black tiger shrimp (Penaeus monodon) using 16S rRNA-based amplicon sequencing. A total of 36 disease-free and infected shrimp were collected from six different hatcheries in Bagerhat, Bangladesh. A final pool of 12 samples (n = 6) was created by homogenization of the hepatopancreas samples from three shrimps collected from each hatchery for the same group. The amplicon sequencing data revealed significant (p < .05) decrease of alpha diversity measurements and subsequent effects (p < .05) on the hepatopancreas microbiota in the infected group, compared to control shrimp. Proteobateria and Aeromonas were the most dominant bacteria at phylum and genus level in both groups and identified as core microbiota in the community. Two bacterial groups at phyla level and eight at genus level were fo...
The coronavirus disease 2019 (COVID-19), a pandemic declared by the World Health Organization on ... more The coronavirus disease 2019 (COVID-19), a pandemic declared by the World Health Organization on March 11, 2020, is caused by the infection of highly transmissible species of a novel coronavirus called severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2). As of July 25, 2021, there are 194,372,584 cases and 4,167,937 deaths with high variability in clinical manifestations, disease burden, and post-disease complications among different people around the globe. Overall, COVID-19 is manifested as mild to moderate in almost 90% of the cases and only the rest 10% of the cases need hospitalization. However, patients with older age and those having different comorbidities have made worst the pandemic scenario. The variability of pathological consequences and clinical manifestations of COVID-19 is associated with differential host–SARS-CoV-2 interactions, which are influenced by the factors that originated from the SARS-CoV-2 and the host. These factors usually include the genomic a...
Major intrinsic proteins (MIPs), commonly known as aquaporins, facilitate the membrane diffusion ... more Major intrinsic proteins (MIPs), commonly known as aquaporins, facilitate the membrane diffusion of water and some other non- polar solutes. MIPs might be involved in host-pathogen interactions. Herein, we identified 17, 24, 27, 19, 19, and 22 full-length MIPs, respectively, in the genomes of six Phytophthora species, P. infestans, P. parasitica, P. sojae, P. ramorum, P. capsici, and P. cinnamomi. These Phytophthora species are devastating plant pathogens and members of oomycetes, a distinct lineage of fungus-like eukaryotic microbes. Phylogenetic analysis showed that the Phytophthora MIPs (PMIPs) formed a completely distinct clade from their counterparts in other taxa and were clustered into nine subgroups. Sequence and structural properties indicated that the primary selectivity-related constrictions, including aromatic arginine (ar/R) selectivity filter and Froger’s positions in PMIPs were distinct from those in other taxa. The substitutions in the conserved Asn-Pro-Ala motifs in...
Covid-19, a serious respiratory complications caused by SARS-CoV-2 has become one of the global t... more Covid-19, a serious respiratory complications caused by SARS-CoV-2 has become one of the global threat to human healthcare system. The present study evaluated the possibility of plant originated approved 117 therapeutics against the main protease protein (MPP), RNA-dependent RNA polymerase (RdRp) and spike protein (S) of SARS-CoV-2 including drug surface analysis by using molecular docking through drug repurposing approaches. The molecular interaction study revealed that Rifampin (-16.3 kcal/mol) were topmost inhibitor of MPP where Azobechalcone were found most potent plant therapeutics for blocking the RdRp (-15.9 kcal /mol) and S (-14.4 kcal/mol) protein of SARS-CoV-2. After the comparative analysis of all docking results, Azobechalcone, Rifampin, Isolophirachalcone, Tetrandrine and Fangchinoline were exhibited as the most potential inhibitory plant compounds for targeting the key proteins of SARS-CoV-2. However, amino acid positions; H41, C145, and M165 of MPP played crucial role...
The present global COVID-19 pandemic caused by the noble pleomorphic severe acute respiratory syn... more The present global COVID-19 pandemic caused by the noble pleomorphic severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has created a vulnerable situation in the global healthcare and economy. In this pandemic situation, researchers all around the world are trying their level best to find suitable therapeutics from various sources to combat against the SARS-CoV-2. To date, numerous bioactive compounds from different sources have been tested to control many viral diseases. However, microbial metabolites are advantageous for drug development over metabolites from other sources. We herein retrieved and reviewed literatures from PubMed, Scopus and Google relevant to antiviral microbial metabolites by searching with the keywords “antiviral microbial metabolites,” “microbial metabolite against virus,” “microorganism with antiviral activity,” “antiviral medicine from microbial metabolite,” “antiviral bacterial metabolites,” “antiviral fungal metabolites,” “antiviral metabolites f...
Ag·SrSnO3 NRs is an excellent photocatalyst, kills both Gram positive and Gram negative bacteria.... more Ag·SrSnO3 NRs is an excellent photocatalyst, kills both Gram positive and Gram negative bacteria. The 2,4-DAPHyd sensor fabricated by layered Ag·SrSnO3 NRs onto GCE shows high sensitivity (7.5854 μA μM−1 cm−2); LDR, 0.1 nM~0.01 mM & LOD, 96.13 ± 4.81 pM.
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