Common bean (Phaseolus vulgaris) cultivars with a high degree of resistance to Xanthomonas axonop... more Common bean (Phaseolus vulgaris) cultivars with a high degree of resistance to Xanthomonas axonopodis pv. phaseoli (Xap) are not available in Brazil. Despite many studies, a low degree of resistance to Xap continues to exist due to its complex genetic inheritance, which is not well known. The objectives of this research were to complement a common bean genetic map based on the cross between a susceptible genotype 'HAB-52' and a resistant genotype 'BAC-6', and to map and analyze genomic regions (quantitative trait loci – QTLs) related to Xap resistance. Eleven linkage groups were determined using 143 RAPD markers, covering 1,234.5 cM of the genome. This map was used to detect QTLs associated with Xap resistance on leaves and pods. The averages of disease severity on leaves (represented by the transformed disease index – TDI) and pods (represented by the diameter of lesion on pods – DLP) were added to the data of the linkage map. Five TDI QTLs and only one LDP QTL were detected. The TDI QTLs were placed in the A, B, G and J linkage groups, with phenotypic variations ranging from 12.7 to 71.6%. The DLP QTL explained 12.9% of the phenotypic variation and was mapped in a distinct linkage group. These results indicate that there are different genes involved in the control of resistance on leaves and pods.
The genetic variability among yellow passion fruit genotypes was evaluated using RAPD as genetic ... more The genetic variability among yellow passion fruit genotypes was evaluated using RAPD as genetic markers of DNA. For that, genetic materials were collected in commercial populations from traditional production fields of the North Fluminense (Itaperuna, São Francisco do Itabapoana, Campos of Goytacazes, RJ-Brazil). The diversity among the cultivated species Passiflora edulis f. flavicarpa Deg. and species related P. alata, P. giberti, P. cincinnata, P. foetida, P. edulis. P. maliformis, P. mucronata, P. suberosa, P. malacophylla, was also estimated. For the study on yellow passion fruit, expressive genetic diversity was not verified; the populations were distributed according to its origin, and the individuals collected in São Francisco do Itabapoana presented major consistency in its grouping, once the formation of the groups a larger number of those individuals were allocated among the same group. For the interspecific study, it was verified that P. maliformis was in a different, but close group to P. mucronata. P. alata was allocated in an isolated group as well as P. giberti. For P. cincinnata and P. edulis (purple passion fruit), both were allocated in the same group, evidencing proximity between the same ones while P. foetida and P. suberosa formed a single group.
The main goals of this work was to obtain estimates of phenotype, genotype and residual correlati... more The main goals of this work was to obtain estimates of phenotype, genotype and residual correlation coefficients and display genotype correlations in direct and indirect effects (path analysis) of height, diameter of stem at the base and number of tillers per meter (explanatory independent variables) on dry matter production (basic dependent variable) of elephantgrass clones in two harvest periods at conditions of northern Rio de Janeiro State, Brazil. Great differences among estimates in two harvest periods were observed, however it could be concluded that height of plants at cutting influenced dry matter production mainly in conditions of high tillering capable clones. Number of tillers per meter and diameter of stem explained better dry matter production potential, acting, respectively, in an direct and inverse way, alternating according to environmental conditions during growth.
Although much appreciated in Brazil, commercial popcorn is currently cropped on a fairly small sc... more Although much appreciated in Brazil, commercial popcorn is currently cropped on a fairly small scale. A number of problems need to be solved to increase production, notably the obtaintion of seeds with good agronomic traits and good culinary characteristics. With the objective of developing superior genotypes in popcorn, a second cycle of intrapopulation recurrent selection based on inbred S1 families was carried out. From the first cycle of selection over the UNB-2U population, 222 S1 families were obtained, which were then divided into six sets and evaluated in a randomized complete block design with two replications within the sets. Experiments were carried out in two Brazilian localities. The analysis of variance revealed environmental effects for all evaluated traits, except popping and stand, showing that, for most traits, these environments affected genotype behavior in different ways. In addition, the set as source of variation was significant for most of the evaluated traits, indicating that dividing the families into sets was an efficient strategy. Genotype-by-environment interaction was detected for most traits, except popping expansion and stand. Differences among genotypes were also detected (1% F-test), making viable the proposition of using the genetic variability in the popcorn population as a basis for future recurrent selection cycles. Superior families were selected using the Smith and Hazel classic index, with predicted genetic gains of 17.8% for popping expansion and 26.95% for yield.
Molecular markers (RAPD, AFLP and microsatellites) were used to generate a linkage map and to ide... more Molecular markers (RAPD, AFLP and microsatellites) were used to generate a linkage map and to identify QTLs associated to witches' broom (Crinipellis perniciosa) resistance in cacao (Theobroma cacao), using 82 individuals of an F2 population derived from the clones ICS-1 (susceptible) and Scavina-6 (resistant). Fifteen evaluations of the number of brooms have been carried out in six years (1997–2002). In order to increase the precision and accuracy in the measures of resistance, each F2 plant was cloned in three replications in a randomized block design with single-tree plots and evaluated over 2 years. Three hundred and forty-two markers were obtained, being 33 microsatellites, 77 AFLPs and 232 RAPDs. The distribution of the number of brooms in the F2 population was skewed to resistance, suggesting the involvement of major genes controlling resistance and the repeatability estimated for resistance was 44%. A strong putative QTL was detected as being related to witches' broom resistance. Associated to this QTL, the microsatellite mTcCIR35 explained 35.5% of the phenotypic variation in resistance. This marker is being used for marker-assisted selection in Scavina-6 progenies, including those selected in private plantations, as an auxiliary tool to the phenotypic selection.
With the objective of selecting superior recombinant lines of snap bean, four segregating F2 popu... more With the objective of selecting superior recombinant lines of snap bean, four segregating F2 populations were selected by early generation testing and advanced by single seed descent. In a randomized complete block design with two replications within sets 120 F6:7 lines were obtained and evaluated for seven traits of agronomic interest. The mean pod yield of the F6:7 generation was 72% higher than in generation F2, confirming the efficiency of early selection. There was genetic variability in the F6:7 lines within the sets. The selection of superior genotypes was possible by the high estimates of narrow-sense heritability. Highest gains in simultaneous selection of traits were expressed by the indices proposed by Mulamba & Mock for the genetic standard deviation and by Williams, based on tentatively attributed arbitrary weights. Line 3 of the F6:7 generation, with a yield of 8,050.0000 kg ha−1 and pod fiber content of 0.3650% is highly promising to be release as new cultivar.
Among the main causes of poor yield in common beans are fungal, viral and bacterial diseases. Com... more Among the main causes of poor yield in common beans are fungal, viral and bacterial diseases. Common bacterial blight, caused by Xanthomonas axonopodis pv. phaseoli (Xap), is one of the major bacterial diseases leading to significant losses in Brazil. Chemical control is ineffective, therefore, the use of resistant varieties becomes an interesting alternative. The objective of the present work was to evaluate disease resistance under natural infection of the pathogen in 109 recombinant inbred lines (F7) of P. vulgaris originated from the cross HAB-52 (susceptible — snapbean) × BAC-6 (resistant — common bean) in two different environments, as well as to calculate genetic parameters to assist in the selection of promising materials to be used in the CBB resistance breeding program. The data of the genetic parameters were compared to those calculated for the F3 generation originated from the same cross. The heritability results for DI (disease index) and VI (variation index) in F3 were 26.85% and 0.26, respectively, whereas in F7 they were 91.77% and 1.36, respectively. These results demonstrate a potential to be explored for this advanced population, that in the future, along with other pathogen variability studies and tests in other environments, may provide more information regarding a more precise evaluation of promising genotypes to be used in common bean breeding programs aiming to obtain CBB resistant varieties.
The combining ability as well as reciprocal effect in diallel of sweet and regular corn genotypes... more The combining ability as well as reciprocal effect in diallel of sweet and regular corn genotypes was investigated for six agronomic and industrial characters: plant height, stand, percentage of ears attacked by insects, grain protein content, and average (mean) dehusked ear length and weight. General Combining Ability () and Specific Combining Ability (Sij) mean square values were statistically significant when evaluating the following characters: plant height, average (mean) dehusked ear length and weight, and grain protein content, indicating that additive and non-additive genetic effects control these characters. There was no statistical difference regarding mean square effects of average (mean) dehusked ear length and weight characters suggesting the utilization of intra and interpopulational breeding methods. 'Doce 13' and 'Sol da Manhã' are among the most indicated genotypes for breeding programs due to observed trend of values. Based on specific combining ability estimates, the best hybrid originated from 'Doce 13' and 'Sol da Manhã' crossing.
The monitoring of the vegetable organ development, as the fruit, is a great scientific interest. ... more The monitoring of the vegetable organ development, as the fruit, is a great scientific interest. The knowledge of the different phases of growth of these fruits can indicate the critical points of nutritional requirements and water, and its relation with climatic factors effect, as the temperature. The aim of this work was to evaluate the growth rate of the hybrid papaya fruit UENF/CALIMAN 01 at different times of the year, in function of the number of degree-day (DD) accumulated. The fruits had reached the harvest point varying in accordance to the different times of development throughout the year. Fruits developed in periods with high temperatures had in smaller time its point of harvest, and it was inverse in fruits developed in colder periods. However, when reaching around 800 DD after anthesis, the fruits had tended to stabilize its growth invariably. After this growth period, the maturation process was as fast as the monthly temperature of the period is bigger.
The objective of this research was to evaluate the alternatives of selection for a population of ... more The objective of this research was to evaluate the alternatives of selection for a population of yellow passion fruit, structured in Design I, for obtaining the best genotypic gain prediction. Six traits were evaluated in 113 progenies at two environments: Viçosa, MG, and Miracema, RJ, in Brazil, grouped in three sets in the randomized blocks design, with three replications and three plants per plot. For gain prediction calculation, the indexes of Mulamba & Mock, Pesek & Baker, Smith and Hazel, and the selection based on number of fruits per plants, were used. The absence of interaction genotype versus environment was observed. The alternatives that presented the best genetic gain prediction were the combined selection and selection among male families. Genetic gain prediction, based on combined selection, was 18.55% for direct selection of fruit number per plant. The indexes of Smith and Hazel presented the lowest genetic gain prediction. The indexes of Mulamba & Mock and Pesek & Baker had the highest predicted genetic gain. The indexes allied with alternatives studied have high potential in the selection of the progenies.
Nuclear genome size variation was studied in eight taxa of Passiflora. Nuclear DNA content was es... more Nuclear genome size variation was studied in eight taxa of Passiflora. Nuclear DNA content was estimated by flow cytometry of nuclei stained by propidium iodide. 2C DNA content ranged from 3.16–5.36 pg for diploids and 1.83 pg for tetraploid. Differences in nuclear genome size were observed among Passiflora species (pg): P. suberosa 1.83, P. edulis f. edulis 3.16, P. edulis f. flavicarpa (Brazil) 3.19, P. edulis f. flavicarpa (Mexico) 3.21, P. mucronata 3.40, Passiflora edmundoi 3.43, P. laurifolia 3.88, P. giberti 3.92, P. quadrangularis 5.36, the largest value being up to 192% greater than the smallest. The means of 2C DNA content were compared by the Tukey test, and the differences in genome size permitted the recognition of five taxa groups. The result was the same for the means 2C genome size (Mbp) values. The genetic parameters were studied with their respective estimators, phenotypic variance (), genotypic variability (), and the genotypic determination index (H2). The genotypic determination index presented high magnitude estimates (greater than 99%) emphasizing the reliability of the results and demonstrating the efficiency of determining the DNA content in the species using only one leaf per plant. Passiflora species show great phenotypic variability and have different geographic distribution that might implicate in genetic diversity.
Common bean (Phaseolus vulgaris) cultivars with a high degree of resistance to Xanthomonas axonop... more Common bean (Phaseolus vulgaris) cultivars with a high degree of resistance to Xanthomonas axonopodis pv. phaseoli (Xap) are not available in Brazil. Despite many studies, a low degree of resistance to Xap continues to exist due to its complex genetic inheritance, which is not well known. The objectives of this research were to complement a common bean genetic map based on the cross between a susceptible genotype 'HAB-52' and a resistant genotype 'BAC-6', and to map and analyze genomic regions (quantitative trait loci – QTLs) related to Xap resistance. Eleven linkage groups were determined using 143 RAPD markers, covering 1,234.5 cM of the genome. This map was used to detect QTLs associated with Xap resistance on leaves and pods. The averages of disease severity on leaves (represented by the transformed disease index – TDI) and pods (represented by the diameter of lesion on pods – DLP) were added to the data of the linkage map. Five TDI QTLs and only one LDP QTL were detected. The TDI QTLs were placed in the A, B, G and J linkage groups, with phenotypic variations ranging from 12.7 to 71.6%. The DLP QTL explained 12.9% of the phenotypic variation and was mapped in a distinct linkage group. These results indicate that there are different genes involved in the control of resistance on leaves and pods.
The genetic variability among yellow passion fruit genotypes was evaluated using RAPD as genetic ... more The genetic variability among yellow passion fruit genotypes was evaluated using RAPD as genetic markers of DNA. For that, genetic materials were collected in commercial populations from traditional production fields of the North Fluminense (Itaperuna, São Francisco do Itabapoana, Campos of Goytacazes, RJ-Brazil). The diversity among the cultivated species Passiflora edulis f. flavicarpa Deg. and species related P. alata, P. giberti, P. cincinnata, P. foetida, P. edulis. P. maliformis, P. mucronata, P. suberosa, P. malacophylla, was also estimated. For the study on yellow passion fruit, expressive genetic diversity was not verified; the populations were distributed according to its origin, and the individuals collected in São Francisco do Itabapoana presented major consistency in its grouping, once the formation of the groups a larger number of those individuals were allocated among the same group. For the interspecific study, it was verified that P. maliformis was in a different, but close group to P. mucronata. P. alata was allocated in an isolated group as well as P. giberti. For P. cincinnata and P. edulis (purple passion fruit), both were allocated in the same group, evidencing proximity between the same ones while P. foetida and P. suberosa formed a single group.
The main goals of this work was to obtain estimates of phenotype, genotype and residual correlati... more The main goals of this work was to obtain estimates of phenotype, genotype and residual correlation coefficients and display genotype correlations in direct and indirect effects (path analysis) of height, diameter of stem at the base and number of tillers per meter (explanatory independent variables) on dry matter production (basic dependent variable) of elephantgrass clones in two harvest periods at conditions of northern Rio de Janeiro State, Brazil. Great differences among estimates in two harvest periods were observed, however it could be concluded that height of plants at cutting influenced dry matter production mainly in conditions of high tillering capable clones. Number of tillers per meter and diameter of stem explained better dry matter production potential, acting, respectively, in an direct and inverse way, alternating according to environmental conditions during growth.
Although much appreciated in Brazil, commercial popcorn is currently cropped on a fairly small sc... more Although much appreciated in Brazil, commercial popcorn is currently cropped on a fairly small scale. A number of problems need to be solved to increase production, notably the obtaintion of seeds with good agronomic traits and good culinary characteristics. With the objective of developing superior genotypes in popcorn, a second cycle of intrapopulation recurrent selection based on inbred S1 families was carried out. From the first cycle of selection over the UNB-2U population, 222 S1 families were obtained, which were then divided into six sets and evaluated in a randomized complete block design with two replications within the sets. Experiments were carried out in two Brazilian localities. The analysis of variance revealed environmental effects for all evaluated traits, except popping and stand, showing that, for most traits, these environments affected genotype behavior in different ways. In addition, the set as source of variation was significant for most of the evaluated traits, indicating that dividing the families into sets was an efficient strategy. Genotype-by-environment interaction was detected for most traits, except popping expansion and stand. Differences among genotypes were also detected (1% F-test), making viable the proposition of using the genetic variability in the popcorn population as a basis for future recurrent selection cycles. Superior families were selected using the Smith and Hazel classic index, with predicted genetic gains of 17.8% for popping expansion and 26.95% for yield.
Molecular markers (RAPD, AFLP and microsatellites) were used to generate a linkage map and to ide... more Molecular markers (RAPD, AFLP and microsatellites) were used to generate a linkage map and to identify QTLs associated to witches' broom (Crinipellis perniciosa) resistance in cacao (Theobroma cacao), using 82 individuals of an F2 population derived from the clones ICS-1 (susceptible) and Scavina-6 (resistant). Fifteen evaluations of the number of brooms have been carried out in six years (1997–2002). In order to increase the precision and accuracy in the measures of resistance, each F2 plant was cloned in three replications in a randomized block design with single-tree plots and evaluated over 2 years. Three hundred and forty-two markers were obtained, being 33 microsatellites, 77 AFLPs and 232 RAPDs. The distribution of the number of brooms in the F2 population was skewed to resistance, suggesting the involvement of major genes controlling resistance and the repeatability estimated for resistance was 44%. A strong putative QTL was detected as being related to witches' broom resistance. Associated to this QTL, the microsatellite mTcCIR35 explained 35.5% of the phenotypic variation in resistance. This marker is being used for marker-assisted selection in Scavina-6 progenies, including those selected in private plantations, as an auxiliary tool to the phenotypic selection.
With the objective of selecting superior recombinant lines of snap bean, four segregating F2 popu... more With the objective of selecting superior recombinant lines of snap bean, four segregating F2 populations were selected by early generation testing and advanced by single seed descent. In a randomized complete block design with two replications within sets 120 F6:7 lines were obtained and evaluated for seven traits of agronomic interest. The mean pod yield of the F6:7 generation was 72% higher than in generation F2, confirming the efficiency of early selection. There was genetic variability in the F6:7 lines within the sets. The selection of superior genotypes was possible by the high estimates of narrow-sense heritability. Highest gains in simultaneous selection of traits were expressed by the indices proposed by Mulamba & Mock for the genetic standard deviation and by Williams, based on tentatively attributed arbitrary weights. Line 3 of the F6:7 generation, with a yield of 8,050.0000 kg ha−1 and pod fiber content of 0.3650% is highly promising to be release as new cultivar.
Among the main causes of poor yield in common beans are fungal, viral and bacterial diseases. Com... more Among the main causes of poor yield in common beans are fungal, viral and bacterial diseases. Common bacterial blight, caused by Xanthomonas axonopodis pv. phaseoli (Xap), is one of the major bacterial diseases leading to significant losses in Brazil. Chemical control is ineffective, therefore, the use of resistant varieties becomes an interesting alternative. The objective of the present work was to evaluate disease resistance under natural infection of the pathogen in 109 recombinant inbred lines (F7) of P. vulgaris originated from the cross HAB-52 (susceptible — snapbean) × BAC-6 (resistant — common bean) in two different environments, as well as to calculate genetic parameters to assist in the selection of promising materials to be used in the CBB resistance breeding program. The data of the genetic parameters were compared to those calculated for the F3 generation originated from the same cross. The heritability results for DI (disease index) and VI (variation index) in F3 were 26.85% and 0.26, respectively, whereas in F7 they were 91.77% and 1.36, respectively. These results demonstrate a potential to be explored for this advanced population, that in the future, along with other pathogen variability studies and tests in other environments, may provide more information regarding a more precise evaluation of promising genotypes to be used in common bean breeding programs aiming to obtain CBB resistant varieties.
The combining ability as well as reciprocal effect in diallel of sweet and regular corn genotypes... more The combining ability as well as reciprocal effect in diallel of sweet and regular corn genotypes was investigated for six agronomic and industrial characters: plant height, stand, percentage of ears attacked by insects, grain protein content, and average (mean) dehusked ear length and weight. General Combining Ability () and Specific Combining Ability (Sij) mean square values were statistically significant when evaluating the following characters: plant height, average (mean) dehusked ear length and weight, and grain protein content, indicating that additive and non-additive genetic effects control these characters. There was no statistical difference regarding mean square effects of average (mean) dehusked ear length and weight characters suggesting the utilization of intra and interpopulational breeding methods. 'Doce 13' and 'Sol da Manhã' are among the most indicated genotypes for breeding programs due to observed trend of values. Based on specific combining ability estimates, the best hybrid originated from 'Doce 13' and 'Sol da Manhã' crossing.
The monitoring of the vegetable organ development, as the fruit, is a great scientific interest. ... more The monitoring of the vegetable organ development, as the fruit, is a great scientific interest. The knowledge of the different phases of growth of these fruits can indicate the critical points of nutritional requirements and water, and its relation with climatic factors effect, as the temperature. The aim of this work was to evaluate the growth rate of the hybrid papaya fruit UENF/CALIMAN 01 at different times of the year, in function of the number of degree-day (DD) accumulated. The fruits had reached the harvest point varying in accordance to the different times of development throughout the year. Fruits developed in periods with high temperatures had in smaller time its point of harvest, and it was inverse in fruits developed in colder periods. However, when reaching around 800 DD after anthesis, the fruits had tended to stabilize its growth invariably. After this growth period, the maturation process was as fast as the monthly temperature of the period is bigger.
The objective of this research was to evaluate the alternatives of selection for a population of ... more The objective of this research was to evaluate the alternatives of selection for a population of yellow passion fruit, structured in Design I, for obtaining the best genotypic gain prediction. Six traits were evaluated in 113 progenies at two environments: Viçosa, MG, and Miracema, RJ, in Brazil, grouped in three sets in the randomized blocks design, with three replications and three plants per plot. For gain prediction calculation, the indexes of Mulamba & Mock, Pesek & Baker, Smith and Hazel, and the selection based on number of fruits per plants, were used. The absence of interaction genotype versus environment was observed. The alternatives that presented the best genetic gain prediction were the combined selection and selection among male families. Genetic gain prediction, based on combined selection, was 18.55% for direct selection of fruit number per plant. The indexes of Smith and Hazel presented the lowest genetic gain prediction. The indexes of Mulamba & Mock and Pesek & Baker had the highest predicted genetic gain. The indexes allied with alternatives studied have high potential in the selection of the progenies.
Nuclear genome size variation was studied in eight taxa of Passiflora. Nuclear DNA content was es... more Nuclear genome size variation was studied in eight taxa of Passiflora. Nuclear DNA content was estimated by flow cytometry of nuclei stained by propidium iodide. 2C DNA content ranged from 3.16–5.36 pg for diploids and 1.83 pg for tetraploid. Differences in nuclear genome size were observed among Passiflora species (pg): P. suberosa 1.83, P. edulis f. edulis 3.16, P. edulis f. flavicarpa (Brazil) 3.19, P. edulis f. flavicarpa (Mexico) 3.21, P. mucronata 3.40, Passiflora edmundoi 3.43, P. laurifolia 3.88, P. giberti 3.92, P. quadrangularis 5.36, the largest value being up to 192% greater than the smallest. The means of 2C DNA content were compared by the Tukey test, and the differences in genome size permitted the recognition of five taxa groups. The result was the same for the means 2C genome size (Mbp) values. The genetic parameters were studied with their respective estimators, phenotypic variance (), genotypic variability (), and the genotypic determination index (H2). The genotypic determination index presented high magnitude estimates (greater than 99%) emphasizing the reliability of the results and demonstrating the efficiency of determining the DNA content in the species using only one leaf per plant. Passiflora species show great phenotypic variability and have different geographic distribution that might implicate in genetic diversity.
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