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Physical Review E
covering statistical, nonlinear, biological, and soft matter physics
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Volume 88, Issue 5
November 2013
HIGHLIGHTED ARTICLES
RAPID COMMUNICATIONS
Granular Materials
Colloids and Complex Fluids
Liquid Crystals
Biological Physics
Networks and Interdisciplinary Physics
Nonlinear Dynamics and Chaos
Fluid Dynamics
ARTICLES
Statistical Physics
Granular Materials
Colloids and Complex Fluids
Films, Interfaces, and Crystal Growth
Liquid Crystals
Polymers
Biological Physics
Networks and Interdisciplinary Physics
Nonlinear Dynamics and Chaos
Fluid Dynamics
Plasma Physics
Classical Physics
Computational Physics
BRIEF REPORTS
Statistical Physics
Liquid Crystals
Polymers
Biological Physics
Networks and Interdisciplinary Physics
Plasma Physics
COMMENTS
ERRATA
HIGHLIGHTED ARTICLES
Featured in Physics
Discrete-network versus modal representations of brain activity: Why a sparse regions-of-interest approach can work for analysis of continuous dynamics
P. A. Robinson
Phys. Rev. E
88
, 054702 (2013) – Published 26 November 2013
Synopsis:
Picking the Brain
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RAPID COMMUNICATIONS
Granular Materials
Rapid Communication
Shear thickening in granular suspensions: Interparticle friction and dynamically correlated clusters
Claus Heussinger
Phys. Rev. E
88
, 050201(R) (2013) – Published 14 November 2013
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Colloids and Complex Fluids
Rapid Communication
Brownian motion and the hydrodynamic friction tensor for colloidal particles of complex shape
Daniela J. Kraft, Raphael Wittkowski, Borge ten Hagen, Kazem V. Edmond, David J. Pine, and Hartmut Löwen
Phys. Rev. E
88
, 050301(R) (2013) – Published 22 November 2013
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Liquid Crystals
Rapid Communication
Hidden solidlike properties in the isotropic phase of the 8CB liquid crystal
P. Kahl, P. Baroni, and L. Noirez
Phys. Rev. E
88
, 050501(R) (2013) – Published 6 November 2013
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Rapid Communication
Dynamics of defects in an active nematic layer
L. M. Pismen
Phys. Rev. E
88
, 050502(R) (2013) – Published 6 November 2013
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Biological Physics
Rapid Communication
Apparent flexoelectricity in lipid bilayer membranes due to external charge and dipolar distributions
F. Ahmadpoor, Q. Deng, L. P. Liu, and P. Sharma
Phys. Rev. E
88
, 050701(R) (2013) – Published 26 November 2013
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Networks and Interdisciplinary Physics
Rapid Communication
Contact-based social contagion in multiplex networks
Emanuele Cozzo, Raquel A. Baños, Sandro Meloni, and Yamir Moreno
Phys. Rev. E
88
, 050801(R) (2013) – Published 6 November 2013
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Rapid Communication
Highly dispersed networks by enhanced redirection
Alan Gabel, P. L. Krapivsky, and S. Redner
Phys. Rev. E
88
, 050802(R) (2013) – Published 12 November 2013
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Rapid Communication
Triple point in correlated interdependent networks
L. D. Valdez, P. A. Macri, H. E. Stanley, and L. A. Braunstein
Phys. Rev. E
88
, 050803(R) (2013) – Published 15 November 2013
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Nonlinear Dynamics and Chaos
Rapid Communication
Generalizing the transition from amplitude to oscillation death in coupled oscillators
Wei Zou, D. V. Senthilkumar, Aneta Koseska, and Jürgen Kurths
Phys. Rev. E
88
, 050901(R) (2013) – Published 7 November 2013
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Fluid Dynamics
Rapid Communication
Initial microfluidic dissolution regime of CO
2
bubbles in viscous oils
Martin Sauzade and Thomas Cubaud
Phys. Rev. E
88
, 051001(R) (2013) – Published 8 November 2013
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Rapid Communication
Experimental realization of a water-wave metamaterial shifter
C. P. Berraquero, A. Maurel, P. Petitjeans, and V. Pagneux
Phys. Rev. E
88
, 051002(R) (2013) – Published 19 November 2013
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ARTICLES
Statistical Physics
Multistage structural evolution in simple monatomic supercritical fluids: Superstable tetrahedral local order
R. E. Ryltsev and N. M. Chtchelkatchev
Phys. Rev. E
88
, 052101 (2013) – Published 1 November 2013
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Percolation with long-range correlated disorder
K. J. Schrenk, N. Posé, J. J. Kranz, L. V. M. van Kessenich, N. A. M. Araújo, and H. J. Herrmann
Phys. Rev. E
88
, 052102 (2013) – Published 4 November 2013
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Weak-noise limit of a piecewise-smooth stochastic differential equation
Yaming Chen, Adrian Baule, Hugo Touchette, and Wolfram Just
Phys. Rev. E
88
, 052103 (2013) – Published 4 November 2013
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Topography of chance
Iddo I. Eliazar and Morrel H. Cohen
Phys. Rev. E
88
, 052104 (2013) – Published 4 November 2013
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Pulling alternating copolymers adsorbed on a striped surface
G. K. Iliev and S. G. Whittington
Phys. Rev. E
88
, 052105 (2013) – Published 4 November 2013
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Green function of the double-fractional Fokker-Planck equation: Path integral and stochastic differential equations
H. Kleinert and V. Zatloukal
Phys. Rev. E
88
, 052106 (2013) – Published 6 November 2013
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Probability distributions extremizing the nonadditive entropy
S
δ
and stationary states of the corresponding nonlinear Fokker-Planck equation
Mauricio S. Ribeiro, Constantino Tsallis, and Fernando D. Nobre
Phys. Rev. E
88
, 052107 (2013) – Published 6 November 2013
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Resonant enhancement of Anderson localization: Analytical approach
I. F. Herrera-González, F. M. Izrailev, and N. M. Makarov
Phys. Rev. E
88
, 052108 (2013) – Published 7 November 2013
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Frenetic origin of negative differential response
Pieter Baerts, Urna Basu, Christian Maes, and Soghra Safaverdi
Phys. Rev. E
88
, 052109 (2013) – Published 7 November 2013
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Critical Casimir forces between homogeneous and chemically striped surfaces
Francesco Parisen Toldin, Matthias Tröndle, and S. Dietrich
Phys. Rev. E
88
, 052110 (2013) – Published 8 November 2013
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Approximate solution to the stochastic Kuramoto model
Bernard Sonnenschein and Lutz Schimansky-Geier
Phys. Rev. E
88
, 052111 (2013) – Published 8 November 2013
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Validity of Fourier's law in one-dimensional momentum-conserving lattices with asymmetric interparticle interactions
Lei Wang (王雷), Bambi Hu (胡斑比), and Baowen Li (李保文)
Phys. Rev. E
88
, 052112 (2013) – Published 11 November 2013
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Completeness of solutions of Bethe's equations
Wenrui Hao, Rafael I. Nepomechie, and Andrew J. Sommese
Phys. Rev. E
88
, 052113 (2013) – Published 11 November 2013
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Quantum versus classical foundation of statistical mechanics under experimentally realistic conditions
Peter Reimann and Mykhaylo Evstigneev
Phys. Rev. E
88
, 052114 (2013) – Published 11 November 2013
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Quasirelativistic Langevin equation
A. V. Plyukhin
Phys. Rev. E
88
, 052115 (2013) – Published 11 November 2013
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Kinetics of the dispersion transition and nonergodicity of a system consisting of a disordered porous medium and a nonwetting liquid
Vladimir D. Borman, Anton A. Belogorlov, Victor A. Byrkin, and Vladimir N. Tronin
Phys. Rev. E
88
, 052116 (2013) – Published 11 November 2013
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Phase transition in random planar diagrams and RNA-type matching
Andrey Y. Lokhov, Olga V. Valba, Mikhail V. Tamm, and Sergei K. Nechaev
Phys. Rev. E
88
, 052117 (2013) – Published 11 November 2013
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Products of rectangular random matrices: Singular values and progressive scattering
Gernot Akemann, Jesper R. Ipsen, and Mario Kieburg
Phys. Rev. E
88
, 052118 (2013) – Published 11 November 2013
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Phase transitions in number theory: From the birthday problem to Sidon sets
Bartolo Luque, Iván G. Torre, and Lucas Lacasa
Phys. Rev. E
88
, 052119 (2013) – Published 12 November 2013
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Postcritical behavior of a gelling system
A. A. Lushnikov
Phys. Rev. E
88
, 052120 (2013) – Published 13 November 2013
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Integral quantum fluctuation theorems under measurement and feedback control
Ken Funo, Yu Watanabe, and Masahito Ueda
Phys. Rev. E
88
, 052121 (2013) – Published 14 November 2013
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Three-site interacting spin chain in a staggered field: Fidelity versus Loschmidt echo
Uma Divakaran
Phys. Rev. E
88
, 052122 (2013) – Published 18 November 2013
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dc electric field effect on the anomalous exponent of the hopping conduction in the one-dimensional disorder model
Takeshi Egami, Koshiro Suzuki, and Katsuhiro Watanabe
Phys. Rev. E
88
, 052123 (2013) – Published 19 November 2013
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Time asymmetry of the Kramers equation with nonlinear friction: Fluctuation-dissipation relation and ratchet effect
A. Sarracino
Phys. Rev. E
88
, 052124 (2013) – Published 19 November 2013
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Ising-like phase transition of an
n
-component Eulerian face-cubic model
Chengxiang Ding, Wenan Guo, and Youjin Deng
Phys. Rev. E
88
, 052125 (2013) – Published 20 November 2013
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Occupation times on a comb with ramified teeth
A. Rebenshtok and E. Barkai
Phys. Rev. E
88
, 052126 (2013) – Published 20 November 2013
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Reduced density matrix for nonequilibrium steady states: A modified Redfield solution approach
Juzar Thingna, Jian-Sheng Wang, and Peter Hänggi
Phys. Rev. E
88
, 052127 (2013) – Published 20 November 2013
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Heat transport enhanced by optical phonons in one-dimensional anharmonic lattices with alternating bonds
Daxing Xiong, Yong Zhang, and Hong Zhao
Phys. Rev. E
88
, 052128 (2013) – Published 20 November 2013
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Critical Casimir forces along the isofields
M. Zubaszewska, A. Maciołek, and A. Drzewiński
Phys. Rev. E
88
, 052129 (2013) – Published 20 November 2013
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Contact processes in crowded environments
S.-L.-Y. Xu and J. M. Schwarz
Phys. Rev. E
88
, 052130 (2013) – Published 21 November 2013
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Optimization of the monolayer growth in adsorption-desorption processes
S. Živković, Z. M. Jakšić, I. Lončarević, Lj. Budinski-Petković, S. B. Vrhovac, and A. Belić
Phys. Rev. E
88
, 052131 (2013) – Published 22 November 2013
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Transition state theory and the dynamics of hard disks
M. Barnett-Jones, P. A. Dickinson, M. J. Godfrey, T. Grundy, and M. A. Moore
Phys. Rev. E
88
, 052132 (2013) – Published 25 November 2013
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Thermal fluctuations and stability of a particle levitated by a repulsive Casimir force in a liquid
Norio Inui and Kosuke Goto
Phys. Rev. E
88
, 052133 (2013) – Published 25 November 2013
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Information exchange dynamics of the two-dimensional
X
Y
model
Minsu Kim, Daun Jeong, H. W. Kwon, and M. Y. Choi
Phys. Rev. E
88
, 052134 (2013) – Published 25 November 2013
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Thermal phase transitions in a honeycomb lattice gas with three-body interactions
Maximilian Lohöfer, Lars Bonnes, and Stefan Wessel
Phys. Rev. E
88
, 052135 (2013) – Published 25 November 2013
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Transport in a chain of asymmetric cavities: Effects of the concentration with hard-core interaction
Gonzalo Suárez, Miguel Hoyuelos, and Héctor O. Mártin
Phys. Rev. E
88
, 052136 (2013) – Published 26 November 2013
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Quasistationarity in a model of long-range interacting particles moving on a sphere
Shamik Gupta and David Mukamel
Phys. Rev. E
88
, 052137 (2013) – Published 26 November 2013
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Interlayer-interaction dependence of latent heat in the Heisenberg model on a stacked triangular lattice with competing interactions
Ryo Tamura and Shu Tanaka
Phys. Rev. E
88
, 052138 (2013) – Published 26 November 2013
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Analytic expression for the mean time to absorption for a random walker on the Sierpinski fractal. III. The effect of non-nearest-neighbor jumps
V. Balakrishnan and John J. Kozak
Phys. Rev. E
88
, 052139 (2013) – Published 26 November 2013
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Transport in weak dynamic disorder: A unified theory
Bin Min and Tiejun Li
Phys. Rev. E
88
, 052140 (2013) – Published 27 November 2013
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Scaling behavior for random walks with memory of the largest distance from the origin
Maurizio Serva
Phys. Rev. E
88
, 052141 (2013) – Published 27 November 2013
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Connection between maximum-work and maximum-power thermal cycles
Julian Gonzalez-Ayala, L. A. Arias-Hernandez, and F. Angulo-Brown
Phys. Rev. E
88
, 052142 (2013) – Published 27 November 2013
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Effects of nanoscale density inhomogeneities on shearing fluids
Benjamin A. Dalton, Peter J. Daivis, J. S. Hansen, and B. D. Todd
Phys. Rev. E
88
, 052143 (2013) – Published 27 November 2013
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Monte Carlo simulation of classical spin models with chaotic billiards
Hideyuki Suzuki
Phys. Rev. E
88
, 052144 (2013) – Published 27 November 2013
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Temperature-dependent defect dynamics in the network glass SiO
2
Katharina Vollmayr-Lee and Annette Zippelius
Phys. Rev. E
88
, 052145 (2013) – Published 27 November 2013
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Granular Materials
Transport coefficients for driven granular mixtures at low density
Nagi Khalil and Vicente Garzó
Phys. Rev. E
88
, 052201 (2013) – Published 11 November 2013
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Directed ratchet transport in granular chains
V. Berardi, J. Lydon, P. G. Kevrekidis, C. Daraio, and R. Carretero-González
Phys. Rev. E
88
, 052202 (2013) – Published 15 November 2013
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Effect of aspect ratio on the development of order in vibrated granular rods
Vikrant Yadav, Jean-Yonnel Chastaing, and Arshad Kudrolli
Phys. Rev. E
88
, 052203 (2013) – Published 21 November 2013
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Hydrodynamics of granular gases with a two-peak distribution
Yanpei Chen, Meiying Hou, Yimin Jiang, and Mario Liu
Phys. Rev. E
88
, 052204 (2013) – Published 21 November 2013
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Particle-scale reversibility in athermal particulate media below jamming
Carl F. Schreck, Robert S. Hoy, Mark D. Shattuck, and Corey S. O’Hern
Phys. Rev. E
88
, 052205 (2013) – Published 25 November 2013
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Colloids and Complex Fluids
Sedimentation stability and aging of aqueous dispersions of Laponite in the presence of cetyltrimethylammonium bromide
V. Savenko, L. Bulavin, M. Rawiso, M. Loginov, E. Vorobiev, and N. I. Lebovka
Phys. Rev. E
88
, 052301 (2013) – Published 4 November 2013
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Intrinsic viscosity of a suspension of cubes
Rajesh K. Mallavajula, Donald L. Koch, and Lynden A. Archer
Phys. Rev. E
88
, 052302 (2013) – Published 6 November 2013
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Generalization of the Gouy-Chapman-Stern model of an electric double layer for a morphologically complex electrode: Deterministic and stochastic morphologies
Rama Kant and Maibam Birla Singh
Phys. Rev. E
88
, 052303 (2013) – Published 7 November 2013
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Nanometer-scale water droplet free from the constraint of reverse micelles at low temperatures
H. Murakami, T. Sada, M. Yamada, and M. Harada
Phys. Rev. E
88
, 052304 (2013) – Published 7 November 2013
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Yield stress in amorphous solids: A mode-coupling-theory analysis
Atsushi Ikeda and Ludovic Berthier
Phys. Rev. E
88
, 052305 (2013) – Published 8 November 2013
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Anisotropic dynamics of water ultraconfined in macroscopically oriented channels of single-crystal beryl: A multifrequency analysis
Lawrence M. Anovitz, Eugene Mamontov, Paul ben Ishai, and Alexander I. Kolesnikov
Phys. Rev. E
88
, 052306 (2013) – Published 8 November 2013
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Nonequilibrium dynamics of a confined colloidal bilayer in a planar shear flow
Tarlan A. Vezirov and Sabine H. L. Klapp
Phys. Rev. E
88
, 052307 (2013) – Published 11 November 2013
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Transient formation of bcc crystals in suspensions of poly(
N
-isopropylacrylamide)-based microgels
U. Gasser, J.-J. Lietor-Santos, A. Scotti, O. Bunk, A. Menzel, and A. Fernandez-Nieves
Phys. Rev. E
88
, 052308 (2013) – Published 13 November 2013
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Understanding collective dynamics of soft active colloids by binary scattering
Timo Hanke, Christoph A. Weber, and Erwin Frey
Phys. Rev. E
88
, 052309 (2013) – Published 19 November 2013
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Kinetics of anisotropic ordering in Laponite dispersions induced by a water-air interface
Ravi Kumar Pujala and H. B. Bohidar
Phys. Rev. E
88
, 052310 (2013) – Published 20 November 2013
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Computational study of the propagation of the longitudinal velocity in a polymer melt contained within a cylinder using a scale-bridging method
Subhranil De
Phys. Rev. E
88
, 052311 (2013) – Published 20 November 2013
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Impedance spectroscopy of ions at liquid-liquid interfaces
Andreas Reindl and Markus Bier
Phys. Rev. E
88
, 052312 (2013) – Published 20 November 2013
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Length-scale crossover of the hydrophobic interaction in a coarse-grained water model
Aviel Chaimovich and M. Scott Shell
Phys. Rev. E
88
, 052313 (2013) – Published 21 November 2013
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Effects of viscosity, surface tension, and evaporation rate of solvent on dry colloidal structures: A lattice Boltzmann study
Toshihisa Munekata, Takahisa Suzuki, Shunsuke Yamakawa, and Ryoji Asahi
Phys. Rev. E
88
, 052314 (2013) – Published 22 November 2013
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Limiting law excess sum rule for polyelectrolytes
Jonathan Landy, YongJin Lee, and YongSeok Jho
Phys. Rev. E
88
, 052315 (2013) – Published 25 November 2013
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Films, Interfaces, and Crystal Growth
Friction of viscoelastic elastomers with rough surfaces under torsional contact conditions
Miguel Trejo, Christian Fretigny, and Antoine Chateauminois
Phys. Rev. E
88
, 052401 (2013) – Published 7 November 2013
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Stability and roughness of tensile cracks in disordered materials
E. Katzav and M. Adda-Bedia
Phys. Rev. E
88
, 052402 (2013) – Published 11 November 2013
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Electrodynamic interaction between a nanoparticle and the surface of a solid
Dmytro Kysylychyn, Volodymyr Piatnytsia, and Valeri Lozovski
Phys. Rev. E
88
, 052403 (2013) – Published 11 November 2013
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Shape transitions in soft spheres regulated by elasticity
Craig Fogle, Amy C. Rowat, Alex J. Levine, and Joseph Rudnick
Phys. Rev. E
88
, 052404 (2013) – Published 11 November 2013
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Inclined fluid-film flow with bottom filtration
H. N. Kandel and J. P. Pascal
Phys. Rev. E
88
, 052405 (2013) – Published 12 November 2013
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Traction and nonequilibrium phase behavior of confined sheared liquids at high pressure
Chiara Gattinoni, David M. Heyes, Christian D. Lorenz, and Daniele Dini
Phys. Rev. E
88
, 052406 (2013) – Published 13 November 2013
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Influence of nonuniform surface magnetic fields in wetting transitions in a confined two-dimensional Ising ferromagnet
Marta L. Trobo and Ezequiel V. Albano
Phys. Rev. E
88
, 052407 (2013) – Published 15 November 2013
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Scaling and width distributions of parity-conserving interfaces
M. Arlego and M. D. Grynberg
Phys. Rev. E
88
, 052408 (2013) – Published 27 November 2013
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Phase-field modeling of two-dimensional crystal growth with anisotropic diffusion
Esteban Meca, Vivek B. Shenoy, and John Lowengrub
Phys. Rev. E
88
, 052409 (2013) – Published 27 November 2013
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Liquid Crystals
Structure transitions in oblate nematic droplets
V. Yu. Rudyak, A. V. Emelyanenko, and V. A. Loiko
Phys. Rev. E
88
, 052501 (2013) – Published 13 November 2013
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Peculiarity of the interaction of small particles in smectic liquid crystals
O. M. Tovkach, Jun-ichi Fukuda, and B. I. Lev
Phys. Rev. E
88
, 052502 (2013) – Published 22 November 2013
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Magnetically induced bistable behavior of ferronematic liquid crystals
S. V. Burylov and A. N. Zakhlevnykh
Phys. Rev. E
88
, 052503 (2013) – Published 22 November 2013
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Two-dimensional system of hard ellipses: A molecular dynamics study
M. Ebrahim Foulaadvand and Mohsen Yarifard
Phys. Rev. E
88
, 052504 (2013) – Published 22 November 2013
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Polymers
Normal stresses in elastic networks
Adrian R. Cioroianu and Cornelis Storm
Phys. Rev. E
88
, 052601 (2013) – Published 4 November 2013
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Superionic behavior in polyethylene-oxide–based single-ion conductors
Kan-Ju Lin and Janna K. Maranas
Phys. Rev. E
88
, 052602 (2013) – Published 13 November 2013
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Tensorial conservation law for nematic polymers
Daniel Svenšek, Gregory M. Grason, and Rudolf Podgornik
Phys. Rev. E
88
, 052603 (2013) – Published 21 November 2013
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Polymer model with long-range interactions: Analysis and applications to the chromatin structure
A. Amitai and D. Holcman
Phys. Rev. E
88
, 052604 (2013) – Published 27 November 2013
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Biological Physics
Kinetic Monte Carlo approach to RNA folding dynamics using structure-based models
Michael Faber and Stefan Klumpp
Phys. Rev. E
88
, 052701 (2013) – Published 4 November 2013
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Cellular senescence in the Penna model of aging
Avikar Periwal
Phys. Rev. E
88
, 052702 (2013) – Published 5 November 2013
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Effect of magnesium ions on dielectric relaxation in semidilute DNA aqueous solutions
D. Grgičin, S. Dolanski Babić, T. Ivek, S. Tomić, and R. Podgornik
Phys. Rev. E
88
, 052703 (2013) – Published 5 November 2013
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Energy-landscape paving for prediction of face-centered-cubic hydrophobic-hydrophilic lattice model proteins
Jingfa Liu, Beibei Song, Zhaoxia Liu, Weibo Huang, Yuanyuan Sun, and Wenjie Liu
Phys. Rev. E
88
, 052704 (2013) – Published 6 November 2013
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Elastic response of filamentous networks with compliant crosslinks
A. Sharma, M. Sheinman, K. M. Heidemann, and F. C. MacKintosh
Phys. Rev. E
88
, 052705 (2013) – Published 8 November 2013
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Long-time mean-square displacements in proteins
Derya Vural, Liang Hong, Jeremy C. Smith, and Henry R. Glyde
Phys. Rev. E
88
, 052706 (2013) – Published 8 November 2013
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Interplay between single-stranded binding proteins on RNA secondary structure
Yi-Hsuan Lin and Ralf Bundschuh
Phys. Rev. E
88
, 052707 (2013) – Published 11 November 2013
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Concentration-dependent like-charge pairing of guanidinium ions and effect of guanidinium chloride on the structure and dynamics of water from all-atom molecular dynamics simulation
Manoj Mandal and Chaitali Mukhopadhyay
Phys. Rev. E
88
, 052708 (2013) – Published 11 November 2013
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Global dynamics of a stochastic neuronal oscillator
Takanobu Yamanobe
Phys. Rev. E
88
, 052709 (2013) – Published 13 November 2013
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Reluctance of a neutral nanoparticle to enter a charged pore
Sebastian Getfert, Thomas Töws, and Peter Reimann
Phys. Rev. E
88
, 052710 (2013) – Published 15 November 2013
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Indentation quantification for in-liquid nanomechanical measurement of soft material using an atomic force microscope: Rate-dependent elastic modulus of live cells
Juan Ren, Shiyan Yu, Nan Gao, and Qingze Zou
Phys. Rev. E
88
, 052711 (2013) – Published 18 November 2013
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Energetics of discrete selectivity bands and mutation-induced transitions in the calcium-sodium ion channels family
I. Kaufman, D. G. Luchinsky, R. Tindjong, P. V. E. McClintock, and R. S. Eisenberg
Phys. Rev. E
88
, 052712 (2013) – Published 19 November 2013
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Incorporating spatial correlations into multispecies mean-field models
Deborah C. Markham, Matthew J. Simpson, Philip K. Maini, Eamonn A. Gaffney, and Ruth E. Baker
Phys. Rev. E
88
, 052713 (2013) – Published 20 November 2013
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Total positive curvature of circular DNA
Jakob Bohr and Kasper W. Olsen
Phys. Rev. E
88
, 052714 (2013) – Published 20 November 2013
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Real-time tracking of neuronal network structure using data assimilation
Franz Hamilton, Tyrus Berry, Nathalia Peixoto, and Timothy Sauer
Phys. Rev. E
88
, 052715 (2013) – Published 21 November 2013
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Using dominant eigenvalue analysis to predict formation of alternans in the heart
Virendra Kakade, Xiaopeng Zhao, and Elena G. Tolkacheva
Phys. Rev. E
88
, 052716 (2013) – Published 22 November 2013
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Evolutionary advantage via common action of recombination and neutrality
David B. Saakian and Chin-Kun Hu
Phys. Rev. E
88
, 052717 (2013) – Published 25 November 2013
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Equilibrium electrodeformation of a spheroidal vesicle in an ac electric field
H. Nganguia and Y.-N. Young
Phys. Rev. E
88
, 052718 (2013) – Published 25 November 2013
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Spread of infectious diseases in a hyperbolic reaction-diffusion susceptible-infected-removed model
Elvira Barbera, Giancarlo Consolo, and Giovanna Valenti
Phys. Rev. E
88
, 052719 (2013) – Published 25 November 2013
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Adaptive grid generation in a patient-specific cerebral aneurysm
Simona Hodis, David F. Kallmes, and Dan Dragomir-Daescu
Phys. Rev. E
88
, 052720 (2013) – Published 25 November 2013
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Parallel logic gates in synthetic gene networks induced by non-Gaussian noise
Yong Xu, Xiaoqin Jin, and Huiqing Zhang
Phys. Rev. E
88
, 052721 (2013) – Published 26 November 2013
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Channel-noise-induced stochastic facilitation in an auditory brainstem neuron model
Brett A. Schmerl and Mark D. McDonnell
Phys. Rev. E
88
, 052722 (2013) – Published 26 November 2013
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Networks and Interdisciplinary Physics
Epidemic thresholds for bipartite networks
D. G. Hernández and S. Risau-Gusman
Phys. Rev. E
88
, 052801 (2013) – Published 4 November 2013
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Normalized modularity optimization method for community identification with degree adjustment
Shuqin Zhang and Hongyu Zhao
Phys. Rev. E
88
, 052802 (2013) – Published 4 November 2013
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Voter models with contrarian agents
Naoki Masuda
Phys. Rev. E
88
, 052803 (2013) – Published 4 November 2013
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Asymptotically inspired moment-closure approximation for adaptive networks
Maxim S. Shkarayev and Leah B. Shaw
Phys. Rev. E
88
, 052804 (2013) – Published 6 November 2013
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Percolation of interdependent networks with intersimilarity
Yanqing Hu, Dong Zhou, Rui Zhang, Zhangang Han, Céline Rozenblat, and Shlomo Havlin
Phys. Rev. E
88
, 052805 (2013) – Published 7 November 2013
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Phase ordering in coupled noisy bistable systems on scale-free networks
Yu Atsumi, Shigefumi Hata, and Hiroya Nakao
Phys. Rev. E
88
, 052806 (2013) – Published 11 November 2013
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Disentangling different types of El Niño episodes by evolving climate network analysis
Alexander Radebach, Reik V. Donner, Jakob Runge, Jonathan F. Donges, and Jürgen Kurths
Phys. Rev. E
88
, 052807 (2013) – Published 12 November 2013
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Robustness of cooperation on scale-free networks under continuous topological change
Genki Ichinose, Yuto Tenguishi, and Toshihiro Tanizawa
Phys. Rev. E
88
, 052808 (2013) – Published 13 November 2013
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Analytical solution of a stochastic model of risk spreading with global coupling
Satoru Morita and Jin Yoshimura
Phys. Rev. E
88
, 052809 (2013) – Published 18 November 2013
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Network reliability: The effect of local network structure on diffusive processes
Mina Youssef, Yasamin Khorramzadeh, and Stephen Eubank
Phys. Rev. E
88
, 052810 (2013) – Published 21 November 2013
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Percolation in multiplex networks with overlap
Davide Cellai, Eduardo López, Jie Zhou, James P. Gleeson, and Ginestra Bianconi
Phys. Rev. E
88
, 052811 (2013) – Published 25 November 2013
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Bootstrapping under constraint for the assessment of group behavior in human contact networks
Nicolas Tremblay, Alain Barrat, Cary Forest, Mark Nornberg, Jean-François Pinton, and Pierre Borgnat
Phys. Rev. E
88
, 052812 (2013) – Published 25 November 2013
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Analytical investigation of the faster-is-slower effect with a simplified phenomenological model
K. Suzuno, A. Tomoeda, and D. Ueyama
Phys. Rev. E
88
, 052813 (2013) – Published 27 November 2013
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Nonlinear Dynamics and Chaos
Mobility of solitons in one-dimensional lattices with the cubic-quintic nonlinearity
C. Mejía-Cortés, Rodrigo A. Vicencio, and Boris A. Malomed
Phys. Rev. E
88
, 052901 (2013) – Published 5 November 2013
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Extremal spacings between eigenphases of random unitary matrices and their tensor products
Marek Smaczyński, Tomasz Tkocz, Marek Kuś, and Karol Życzkowski
Phys. Rev. E
88
, 052902 (2013) – Published 5 November 2013
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Passive band-gap reconfiguration born from bifurcation asymmetry
Brian P. Bernard and Brian P. Mann
Phys. Rev. E
88
, 052903 (2013) – Published 7 November 2013
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Characterizing the deterministic nature of individual power dropouts in semiconductor lasers subject to delayed feedback
K. Hicke, X. Porte, and I. Fischer
Phys. Rev. E
88
, 052904 (2013) – Published 7 November 2013
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Chaotic dynamics of a microswimmer in Poiseuille flow
Ricardo Chacón
Phys. Rev. E
88
, 052905 (2013) – Published 8 November 2013
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Solitons and thermal fluctuations in strongly nonlinear solids
N. Upadhyaya, A. M. Turner, and V. Vitelli
Phys. Rev. E
88
, 052906 (2013) – Published 8 November 2013
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Onset of dynamic activity in globally coupled excitable and oscillatory units
Hiroaki Daido, Akira Kasama, and Kazuho Nishio
Phys. Rev. E
88
, 052907 (2013) – Published 11 November 2013
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Generalized synchronization in relay systems with instantaneous coupling
R. Gutiérrez, R. Sevilla-Escoboza, P. Piedrahita, C. Finke, U. Feudel, J. M. Buldú, G. Huerta-Cuellar, R. Jaimes-Reátegui, Y. Moreno, and S. Boccaletti
Phys. Rev. E
88
, 052908 (2013) – Published 14 November 2013
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Infinite-dimensional Bayesian filtering for detection of quasiperiodic phenomena in spatiotemporal data
Arno Solin and Simo Särkkä
Phys. Rev. E
88
, 052909 (2013) – Published 14 November 2013
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Edge of chaos and genesis of turbulence
Abraham C.-L. Chian, Pablo R. Muñoz, and Erico L. Rempel
Phys. Rev. E
88
, 052910 (2013) – Published 18 November 2013
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Extreme events in excitable systems and mechanisms of their generation
Gerrit Ansmann, Rajat Karnatak, Klaus Lehnertz, and Ulrike Feudel
Phys. Rev. E
88
, 052911 (2013) – Published 18 November 2013
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Statistics of quantum transport in weakly nonideal chaotic cavities
Sergio Rodríguez-Pérez, Ricardo Marino, Marcel Novaes, and Pierpaolo Vivo
Phys. Rev. E
88
, 052912 (2013) – Published 19 November 2013
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Quantum localization of chaotic eigenstates and the level spacing distribution
Benjamin Batistić and Marko Robnik
Phys. Rev. E
88
, 052913 (2013) – Published 20 November 2013
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Rational solitons of wave resonant-interaction models
Antonio Degasperis and Sara Lombardo
Phys. Rev. E
88
, 052914 (2013) – Published 20 November 2013
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Particle current on flexible surfaces excited by harmonic waves
Neeta Verma and Anirvan DasGupta
Phys. Rev. E
88
, 052915 (2013) – Published 21 November 2013
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Quasiperiodicity route to spatiotemporal chaos in one-dimensional pattern-forming systems
Marcel G. Clerc and Nicolas Verschueren
Phys. Rev. E
88
, 052916 (2013) – Published 22 November 2013
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Predicting critical transitions in dynamical systems from time series using nonstationary probability density modeling
Frank Kwasniok
Phys. Rev. E
88
, 052917 (2013) – Published 25 November 2013
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Electric-field-controlled unpinning of scroll waves
Zulma A. Jiménez, Zhihui Zhang, and Oliver Steinbock
Phys. Rev. E
88
, 052918 (2013) – Published 27 November 2013
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Exponential quantum spreading in a class of kicked rotor systems near high-order resonances
Hailong Wang, Jiao Wang, Italo Guarneri, Giulio Casati, and Jiangbin Gong
Phys. Rev. E
88
, 052919 (2013) – Published 27 November 2013
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Kicked-Harper model versus on-resonance double-kicked rotor model: From spectral difference to topological equivalence
Hailong Wang, Derek Y. H. Ho, Wayne Lawton, Jiao Wang, and Jiangbin Gong
Phys. Rev. E
88
, 052920 (2013) – Published 27 November 2013
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Fluid Dynamics
Electro-osmosis of electrorheological fluids
Jayabrata Dhar, Aditya Bandopadhyay, and Suman Chakraborty
Phys. Rev. E
88
, 053001 (2013) – Published 4 November 2013
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Shear wave instability for electrified falling films
Arghya Samanta
Phys. Rev. E
88
, 053002 (2013) – Published 4 November 2013
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Radial viscous fingering: Wetting film effects on pattern-forming mechanisms
Pedro H. A. Anjos and José A. Miranda
Phys. Rev. E
88
, 053003 (2013) – Published 6 November 2013
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History independence of steady state in simultaneous two-phase flow through two-dimensional porous media
Marion Erpelding, Santanu Sinha, Ken Tore Tallakstad, Alex Hansen, Eirik Grude Flekkøy, and Knut Jørgen Måløy
Phys. Rev. E
88
, 053004 (2013) – Published 7 November 2013
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Steady and transient thin-jet flow of a viscoelastic fluid
Michael A. Hanyk and Roger E. Khayat
Phys. Rev. E
88
, 053005 (2013) – Published 7 November 2013
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Interfacial elastic fingering in Hele-Shaw cells: A weakly nonlinear study
Gabriel D. Carvalho, José A. Miranda, and Hermes Gadêlha
Phys. Rev. E
88
, 053006 (2013) – Published 11 November 2013
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Bifurcation from stable holes to replicating holes in vibrated dense suspensions
H. Ebata and M. Sano
Phys. Rev. E
88
, 053007 (2013) – Published 11 November 2013
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Experimetal study of a freely falling plate with an inhomogeneous mass distribution
Wentao Huang, Hong Liu, Fuxin Wang, Junqi Wu, and H. P. Zhang
Phys. Rev. E
88
, 053008 (2013) – Published 11 November 2013
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Transition of the scaling law in inverse energy cascade range caused by a nonlocal excitation of coherent structures observed in two-dimensional turbulent fields
Atsushi Mizuta, Takeshi Matsumoto, and Sadayoshi Toh
Phys. Rev. E
88
, 053009 (2013) – Published 11 November 2013
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Effect of metallic walls on dynamos generated by laminar boundary-driven flow in a spherical domain
Céline Guervilly, Toby S. Wood, and Nicholas H. Brummell
Phys. Rev. E
88
, 053010 (2013) – Published 13 November 2013
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Kinematic dynamo action in square and hexagonal patterns
B. Favier and M. R. E. Proctor
Phys. Rev. E
88
, 053011 (2013) – Published 13 November 2013
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Information content of turbulence
R. T. Cerbus and W. I. Goldburg
Phys. Rev. E
88
, 053012 (2013) – Published 13 November 2013
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Temperature dependence of capillary dynamics: A multiphase and multicomponent adiabatic approach
Federico Maggi and Fernando Alonso-Marroquin
Phys. Rev. E
88
, 053013 (2013) – Published 15 November 2013
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Origins of the
k
−
2
spectrum in decaying Taylor-Green magnetohydrodynamic turbulent flows
V. Dallas and A. Alexakis
Phys. Rev. E
88
, 053014 (2013) – Published 18 November 2013
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Electrowetting-driven oscillating drops sandwiched between two substrates
Dileep Mampallil, H. Burak Eral, Adrian Staicu, Frieder Mugele, and Dirk van den Ende
Phys. Rev. E
88
, 053015 (2013) – Published 19 November 2013
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Topology of hydrothermal waves in liquid bridges and dissipative structures of transported particles
Roman V. Mukin and Hendrik C. Kuhlmann
Phys. Rev. E
88
, 053016 (2013) – Published 21 November 2013
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Generalized vortex model for the inverse cascade of two-dimensional turbulence
J. Friedrich and R. Friedrich
Phys. Rev. E
88
, 053017 (2013) – Published 22 November 2013
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Onset of convection in a finite two-dimensional container due to unipolar injection of ions
Jian Wu, Philippe Traoré, Pedro A. Vázquez, and Alberto T. Pérez
Phys. Rev. E
88
, 053018 (2013) – Published 22 November 2013
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Experimental observations of Soret-driven convection in the transient diffusive boundary layer
Stephan Messlinger, Christoph Kramer, Jürgen J. Schmied, Florian Winkel, Wolfgang Schöpf, and Ingo Rehberg
Phys. Rev. E
88
, 053019 (2013) – Published 25 November 2013
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Electrohydrodynamics within the electrical double layer in the presence of finite temperature gradients
Tanmay Ghonge, Jeevanjyoti Chakraborty, Ranabir Dey, and Suman Chakraborty
Phys. Rev. E
88
, 053020 (2013) – Published 26 November 2013
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Three-dimensional dynamics of oblate and prolate capsules in shear flow
Z. Wang, Y. Sui, P. D. M. Spelt, and W. Wang
Phys. Rev. E
88
, 053021 (2013) – Published 26 November 2013
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Plasma Physics
Dislocation dynamics during plastic deformations of complex plasma crystals
C. Durniak, D. Samsonov, J. F. Ralph, S. Zhdanov, and G. Morfill
Phys. Rev. E
88
, 053101 (2013) – Published 1 November 2013
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Energy loss and
Z
oscillations of atomic beams in plasmas
C. F. Clauser and N. R. Arista
Phys. Rev. E
88
, 053102 (2013) – Published 19 November 2013
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Electron magnetohydrodynamics: Dynamics and turbulence
Maxim Lyutikov
Phys. Rev. E
88
, 053103 (2013) – Published 20 November 2013
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Classical Physics
Geometrical feature of the scaling behavior of the limit-point pressure of inflated hyperelastic membranes
Ganesh Tamadapu, Nikhil Nandkumar Dhavale, and Anirvan DasGupta
Phys. Rev. E
88
, 053201 (2013) – Published 7 November 2013
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Wide vector solitons in systems with time- and space-modulated nonlinearities
L. E. Arroyo Meza, A. de Souza Dutra, and M. B. Hott
Phys. Rev. E
88
, 053202 (2013) – Published 8 November 2013
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Modulational instability and breathing motion in the two-dimensional nonlinear Schrödinger equation with a one-dimensional harmonic potential
Hidetsugu Sakaguchi and Yusuke Kageyama
Phys. Rev. E
88
, 053203 (2013) – Published 18 November 2013
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Integrable aspects and soliton interaction for a generalized inhomogeneous Gardner model with external force in plasmas and fluids
Yu-Ping Liu, Yi-Tian Gao, and Guang-Mei Wei
Phys. Rev. E
88
, 053204 (2013) – Published 20 November 2013
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Computational Physics
Efficiency and time-dependent cross correlations in multivariable Monte Carlo updating
Christopher C. J. Potter and Robert H. Swendsen
Phys. Rev. E
88
, 053301 (2013) – Published 1 November 2013
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Dynamically optimized Wang-Landau sampling with adaptive trial moves and modification factors
Yang Wei Koh, Hwee Kuan Lee, and Yutaka Okabe
Phys. Rev. E
88
, 053302 (2013) – Published 4 November 2013
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Diagnostics for insufficiencies of posterior calculations in Bayesian signal inference
Sebastian Dorn, Niels Oppermann, and Torsten A. Enßlin
Phys. Rev. E
88
, 053303 (2013) – Published 4 November 2013
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Lattice Boltzmann method coupled with the Oldroyd-B constitutive model for a viscoelastic fluid
Jin Su, Jie Ouyang, Xiaodong Wang, and Binxin Yang
Phys. Rev. E
88
, 053304 (2013) – Published 4 November 2013
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Transfer-matrix approach for finite-difference time-domain simulation of periodic structures
Alexei Deinega, Sergei Belousov, and Ilya Valuev
Phys. Rev. E
88
, 053305 (2013) – Published 8 November 2013
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Generating true minima in constrained variational formulations via modified Lagrange multipliers
Francisco J. Solis, Vikram Jadhao, and Monica Olvera de la Cruz
Phys. Rev. E
88
, 053306 (2013) – Published 11 November 2013
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Achieving tunable surface tension in the pseudopotential lattice Boltzmann modeling of multiphase flows
Qing Li and K. H. Luo
Phys. Rev. E
88
, 053307 (2013) – Published 15 November 2013
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Exact transparent boundary condition for the three-dimensional Schrödinger equation in a rectangular cuboid computational domain
R. M. Feshchenko and A. V. Popov
Phys. Rev. E
88
, 053308 (2013) – Published 18 November 2013
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Efficient parallelization of short-range molecular dynamics simulations on many-core systems
R. Meyer
Phys. Rev. E
88
, 053309 (2013) – Published 18 November 2013
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Multidimensional on-lattice higher-order models in the thermal lattice Boltzmann theory
Jae Wan Shim
Phys. Rev. E
88
, 053310 (2013) – Published 21 November 2013
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Filter-matrix lattice Boltzmann model for microchannel gas flows
Congshan Zhuo and Chengwen Zhong
Phys. Rev. E
88
, 053311 (2013) – Published 25 November 2013
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Precise algorithm to generate random sequential addition of hard hyperspheres at saturation
G. Zhang and S. Torquato
Phys. Rev. E
88
, 053312 (2013) – Published 25 November 2013
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BRIEF REPORTS
Statistical Physics
Effective diffusion coefficient of a Brownian particle in a periodically expanded conical tube
Anatoly E. Antipov, Alexander V. Barzykin, Alexander M. Berezhkovskii, Yurii A. Makhnovskii, Vladimir Yu. Zitserman, and Sergei M. Aldoshin
Phys. Rev. E
88
, 054101 (2013) – Published 7 November 2013
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Simplified approach for calculating moments of action for linear reaction-diffusion equations
Adam J. Ellery, Matthew J. Simpson, Scott W. McCue, and Ruth E. Baker
Phys. Rev. E
88
, 054102 (2013) – Published 15 November 2013
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Propagator for the Fokker-Planck equation with an arbitrary diffusion coefficient
Chern Lee, Ka-Di Zhu, and Ji-Gen Chen
Phys. Rev. E
88
, 054103 (2013) – Published 20 November 2013
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Liquid Crystals
Hydrodynamic effects in the measurement of interparticle forces in nematic colloids
Kuniyoshi Izaki and Yasuyuki Kimura
Phys. Rev. E
88
, 054501 (2013) – Published 21 November 2013
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Polymers
Single polymer gating of channels under a solvent gradient
S. Nath, D. P. Foster, D. Giri, and S. Kumar
Phys. Rev. E
88
, 054601 (2013) – Published 7 November 2013
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Biological Physics
Importance of the Voronoi domain partition for position-jump reaction-diffusion processes on nonuniform rectilinear lattices
Christian A. Yates and Ruth E. Baker
Phys. Rev. E
88
, 054701 (2013) – Published 22 November 2013
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Featured in Physics
Discrete-network versus modal representations of brain activity: Why a sparse regions-of-interest approach can work for analysis of continuous dynamics
P. A. Robinson
Phys. Rev. E
88
, 054702 (2013) – Published 26 November 2013
Synopsis:
Picking the Brain
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Networks and Interdisciplinary Physics
Synchronized flow in oversaturated city traffic
Boris S. Kerner, Sergey L. Klenov, Gerhard Hermanns, Peter Hemmerle, Hubert Rehborn, and Michael Schreckenberg
Phys. Rev. E
88
, 054801 (2013) – Published 8 November 2013
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Plasma Physics
Absolute measurement of the total ion-drag force on a single plasma-confined microparticle at the void edge under microgravity conditions
J. Beckers, D. J. M. Trienekens, and G. M. W. Kroesen
Phys. Rev. E
88
, 055101 (2013) – Published 19 November 2013
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COMMENTS
Comment on “Hydrodynamics of fractal continuum flow” and “Map of fluid flow in fractal porous medium into fractal continuum flow”
Jun Li and Martin Ostoja-Starzewski
Phys. Rev. E
88
, 057001 (2013) – Published 21 November 2013
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Reply to “Comment on ‘Hydrodynamics of fractal continuum flow’ and ‘Map of fluid flow in fractal porous medium into fractal continuum flow’ ”
Alexander S. Balankin and Benjamin Espinoza Elizarraraz
Phys. Rev. E
88
, 057002 (2013) – Published 21 November 2013
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ERRATA
Erratum: Electronic and ionic structures of warm and hot dense matter [Phys. Rev. E
87
, 013104 (2013)]
C. E. Starrett and D. Saumon
Phys. Rev. E
88
, 059901 (2013) – Published 27 November 2013
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