(Q34057931)

English

Classification of multi-helical DNA-binding domains and application to predict the DBD structures of sigma factor, LysR, OmpR/PhoB, CENP-B, Rapl, and Xy1S/Ada/AraC.

scientific article

In more languages

default for all languages

No label defined

No description defined

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Classification of multi-helical DNA-binding domains and application to predict the DBD structures of sigma factor, LysR, OmpR/PhoB, CENP-B, Rapl, and Xy1S/Ada/AraC. (English)

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Steven E. Brenner

2

object named as

Brenner SE

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

author name string

Suzuki M

1

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

language of work or name

0 references

publication date

1 September 1995

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

number of pages

7

1 reference

based on heuristic

inferred from page(s)

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

372

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

2-3

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

215-221

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

A structural taxonomy of DNA-binding domains

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

DNA recognition by proteins with the helix-turn-helix motif

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Zinc finger-DNA recognition: crystal structure of a Zif268-DNA complex at 2.1 A

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Crystal structure of a five-finger GLI-DNA complex: new perspectives on zinc fingers

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Crystallographic analysis of the interaction of the glucocorticoid receptor with DNA

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

The crystal structure of the estrogen receptor DNA-binding domain bound to DNA: how receptors discriminate between their response elements

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Structural determinants of nuclear receptor assembly on DNA direct repeats

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

DNA recognition by GAL4: structure of a protein-DNA complex.

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

The GCN4 basic region leucine zipper binds DNA as a dimer of uninterrupted alpha helices: crystal structure of the protein-DNA complex

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

The X-ray structure of the GCN4-bZIP bound to ATF/CREB site DNA shows the complex depends on DNA flexibility

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Recognition by Max of its cognate DNA through a dimeric b/HLH/Z domain

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Crystal structure of MyoD bHLH domain-DNA complex: perspectives on DNA recognition and implications for transcriptional activation

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Crystal structure at 1.7 A of the bovine papillomavirus-1 E2 DNA-binding domain bound to its DNA target

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Crystal structure of a p53 tumor suppressor-DNA complex: understanding tumorigenic mutations

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Protein-DNA recognition

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Crystal structure of globular domain of histone H5 and its implications for nucleosome binding

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Co-crystal structure of the HNF-3/fork head DNA-recognition motif resembles histone H5

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Three-dimensional structure of the diphtheria toxin repressor in complex with divalent cation co-repressors

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Structure of the cro repressor from bacteriophage lambda and its interaction with DNA.

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Hin recombinase bound to DNA: the origin of specificity in major and minor groove interactions

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

The Protein Data Bank: a computer-based archival file for macromolecular structures

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

RASMOL: biomolecular graphics for all

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Structure and function of bacterial sigma factors

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

The sigma 70 family: sequence conservation and evolutionary relationships

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

skn-1, a maternally expressed gene required to specify the fate of ventral blastomeres in the early C. elegans embryo

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Nucleotide sequence of the phoB gene, the positive regulatory gene for the phosphate regulon of Escherichia coli K-12.

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

The operator-binding domain of lambda repressor: structure and DNA recognition

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

The DNA binding arm of lambda repressor: critical contacts from a flexible region

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Structure of phage 434 Cro protein at 2.35 A resolution

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Crystal structure of a MAT alpha 2 homeodomain-operator complex suggests a general model for homeodomain-DNA interactions

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

The phage 434 Cro/OR1 complex at 2.5 A resolution

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Determination of the nuclear magnetic resonance solution structure of the DNA-binding domain (residues 1 to 69) of the 434 repressor and comparison with the X-ray crystal structure

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Structure of the amino-terminal domain of phage 434 repressor at 2.0 A resolution

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Structure of the repressor-operator complex of bacteriophage 434.

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

The complex between phage 434 repressor DNA-binding domain and operator site OR3: structural differences between consensus and non-consensus half-sites

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

The phage 434 OR2/R1-69 complex at 2.5 A resolution

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Determination of the nuclear magnetic resonance solution structure of an Antennapedia homeodomain-DNA complex

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Crystal structure of a CAP-DNA complex: the DNA is bent by 90 degrees

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Crystal structure of an engrailed homeodomain-DNA complex at 2.8 A resolution: a framework for understanding homeodomain-DNA interactions

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Solution structure of the ets domain of Fli-1 when bound to DNA

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Three-dimensional structure of the E. coli DNA-binding protein FIS.

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Solution structure of the DNA-binding domain of the heat shock transcription factor determined by multidimensional heteronuclear magnetic resonance spectroscopy

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

A protein structure from nuclear magnetic resonance data. lac repressor headpiece

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Structure of the complex of lac repressor headpiece and an 11 base-pair half-operator determined by nuclear magnetic resonance spectroscopy and restrained molecular dynamics

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Solution structure of a specific DNA complex of the Myb DNA-binding domain with cooperative recognition helices

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Solution structure of the POU-specific DNA-binding domain of Oct-1

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

The solution structure of the Oct-1 POU-specific domain reveals a striking similarity to the bacteriophage lambda repressor DNA-binding domain

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Solution structure of a POU-specific homeodomain: 3D-NMR studies of human B-cell transcription factor Oct-2

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Crystal structure of the Oct-1 POU domain bound to an octamer site: DNA recognition with tethered DNA-binding modules

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Determination of the nuclear magnetic resonance structure of the DNA-binding domain of the P22 c2 repressor (1 to 76) in solution and comparison with the DNA-binding domain of the 434 repressor

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Crystal structure of LacI member, PurR, bound to DNA: minor groove binding by alpha helices

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Structure of the Tet repressor-tetracycline complex and regulation of antibiotic resistance

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Crystal structure of trp repressor/operator complex at atomic resolution

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Tandem binding in crystals of a trp repressor/operator half-site complex

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

The solution structures of the trp repressor-operator DNA complex

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2895%2900988-L

21 January 2018

Identifiers

10.1016/0014-5793(95)00988-L

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q34057931&oldid=1980627753"