(Q35196407)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9367987%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

title

Mechanism of active site exclusion in a site-specific recombinase: role of the DNA substrate in conferring half-of-the-sites activity (English)

1 reference

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7 November 2019

2

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7 November 2019

author name string

J Lee

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9367987%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

M Jayaram

series ordinal

3

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7 November 2019

publication date

1 November 1997

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7 November 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9367987%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

volume

11

1 reference

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7 November 2019

issue

22

1 reference

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7 November 2019

page(s)

3061-3071

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Structure of Cre recombinase complexed with DNA in a site-specific recombination synapse

7 November 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

The Cre recombinase cleaves the lox site in trans

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

Assembly and orientation of Flp recombinase active sites on two-, three- and four-armed DNA substrates: implications for a recombination mechanism.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

Tests for the fractional active-site model in Flp site-specific recombination. Assembly of a functional recombination complex in half-site and full-site strand transfer

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

Complementation of bacteriophage lambda integrase mutants: evidence for an intersubunit active site.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

Generality of the shared active site among yeast family site-specific recombinases. The R site-specific recombinase follows the Flp paradigm [corrected]

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

Dissecting the resolution reaction of lambda integrase using suicide Holliday junction substrates

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

Directed protein replacement in recombination full sites reveals trans-horizontal DNA cleavage by Flp recombinase.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

Lambda integrase cleaves DNA in cis.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

Xer site-specific recombination in vitro

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

The Flp recombinase of the 2-microns plasmid of Saccharomyces cerevisiae

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

Chemical probe and missing nucleoside analysis of Flp recombinase bound to the recombination target sequence

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

Recombination within the yeast plasmid 2mu circle is site-specific

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

Protein engineering of antibody binding sites: recovery of specific activity in an anti-digoxin single-chain Fv analogue produced in Escherichia coli

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

The integrase family of site-specific recombinases: regional similarities and global diversity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

Step-arrest mutants of FLP recombinase: implications for the catalytic mechanism of DNA recombination

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

FLP recombinase of the 2 microns circle plasmid of Saccharomyces cerevisiae bends its DNA target. Isolation of FLP mutants defective in DNA bending

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

FLP protein of 2 mu circle plasmid of yeast induces multiple bends in the FLP recognition target site

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

Identification of the active site tyrosine of Flp recombinase. Possible relevance of its location to the mechanism of recombination

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

Tyr60 variants of Flp recombinase generate conformationally altered protein-DNA complexes. Differential activity in full-site and half-site recombinations

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

Evidence for a second conserved arginine residue in the integrase family of recombination proteins

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

Catalysis by site-specific recombinases

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

Solution structure of a trinucleotide A-T-A bulge loop within a DNA duplex

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

Mechanism of cleavage and ligation by FLP recombinase: classification of mutations in FLP protein by in vitro complementation analysis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

Interaction of the NH2- and COOH-terminal domains of the FLP recombinase with the FLP recognition target sequence

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

Active-site assembly and mode of DNA cleavage by Flp recombinase during full-site recombination

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

Kinking of DNA and RNA helices by bulged nucleotides observed by fluorescence resonance energy transfer

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316700

Directionality in FLP protein-promoted site-specific recombination is mediated by DNA-DNA pairing

26 September 2018

1 reference

12 December 2020

Protein-based asymmetry and protein-protein interactions in FLP recombinase-mediated site-specific recombination

1 reference

12 December 2020

DNA cleavage in trans by the active site tyrosine during Flp recombination: Switching protein partners before exchanging strands

1 reference

12 December 2020

Half-site recombinations mediated by yeast site-specific recombinases Flp and R

1 reference

12 December 2020

Bending-incompetent variants of Flp recombinase mediate strand transfer in half-site recombinations: role of DNA bending in recombination

1 reference

12 December 2020

Mutations of the FLP recombinase gene that cause a deficiency in DNA bending and strand cleavage

1 reference

12 December 2020

Sequence-specific cleavage of DNA via nucleophilic attack of hydrogen peroxide, assisted by Flp recombinase

1 reference

12 December 2020

Mechanism of site-specific recombination. Logic of assembling recombinase catalytic site from fractional active sites

1 reference

12 December 2020

Asymmetry in active complexes of FLP recombinase

1 reference

12 December 2020

The Role of DNA Bending in Flp-mediated Site-specific Recombination

1 reference

12 December 2020

T4 endonuclease VII selects and alters the structure of the four-way DNA junction; binding of a resolution-defective mutant enzyme

1 reference

12 December 2020

Identifiers

DOI

10.1101/GAD.11.22.3061

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9367987%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9367987%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

PubMed publication ID

9367987

1 reference