In the last few years, the amount of collected data, in various computer science applications, ha... more In the last few years, the amount of collected data, in various computer science applications, has grown considerably. These large volumes of data need to be analyzed in order to extract useful hidden knowledge. This work focuses on association rule extraction. This technique is one of the most popular in data mining. Nevertheless, the number of extracted association rules is often very high, and many of them are redundant. In this paper, we propose a new algorithm, called PRINCE. Its main feature is the construction of a partially ordered structure for extracting subsets of association rules, called generic bases. Without loss of information these subsets form representation of the whole association rule set. To reduce the cost of such a construction, the partially ordered structure is built thanks to the minimal generators associated to frequent closed patterns. The closed ones are simultaneously derived with generic bases thanks to a simple bottom-up traversal of the obtained structure. The experimentations we carried out in benchmark and "worst case" contexts showed the efficiency of the proposed algorithm, compared to algorithms like CLOSE, A-CLOSE and TITANIC.
Twenty Third International Flairs Conference, 2010
... {tarek.hamrouni@fst.rnu.tn, hamrouni@cril.univ-artois.fr} ... On the other hand, in many real... more ... {tarek.hamrouni@fst.rnu.tn, hamrouni@cril.univ-artois.fr} ... On the other hand, in many real-life applications like market basket analysis, medical data analysis, social network anal-ysis and bioinformatics, etc., the disjunctive connector link-ing items can bring key information as ...
One of the most powerful techniques to study protein structures is to look for recurrent fragment... more One of the most powerful techniques to study protein structures is to look for recurrent fragments (also called substructures or spatial motifs), then use them as patterns to characterize the proteins under study. An emergent trend consists in parsing proteins three-dimensional (3D) structures into graphs of amino acids. Hence, the search of recurrent spatial motifs is formulated as a process of frequent subgraph discovery where each subgraph represents a spatial motif. In this scope, several efficient approaches for frequent subgraph discovery have been proposed in the literature. However, the set of discovered frequent subgraphs is too large to be efficiently analyzed and explored in any further process. In this paper, we propose a novel pattern selection approach that shrinks the large number of discovered frequent subgraphs by selecting the representative ones. Existing pattern selection approaches do not exploit the domain knowledge. Yet, in our approach we incorporate the evolutionary information of amino acids defined in the substitution matrices in order to select the representative subgraphs. We show the effectiveness of our approach on a number of real datasets. The results issued from our experiments show that our approach is able to considerably decrease the number of motifs while enhancing their interestingness.
In the last few years, the amount of collected data, in various computer science applications, ha... more In the last few years, the amount of collected data, in various computer science applications, has grown considerably. These large volumes of data need to be analyzed in order to extract useful hidden knowledge. This work focuses on association rule extraction. This technique is one of the most popular in data mining. Nevertheless, the number of extracted association rules is often very high, and many of them are redundant. In this paper, we propose a new algorithm, called PRINCE. Its main feature is the construction of a partially ordered structure for extracting subsets of association rules, called generic bases. Without loss of information these subsets form representation of the whole association rule set. To reduce the cost of such a construction, the partially ordered structure is built thanks to the minimal generators associated to frequent closed patterns. The closed ones are simultaneously derived with generic bases thanks to a simple bottom-up traversal of the obtained structure. The experimentations we carried out in benchmark and "worst case" contexts showed the efficiency of the proposed algorithm, compared to algorithms like CLOSE, A-CLOSE and TITANIC.
Twenty Third International Flairs Conference, 2010
... {tarek.hamrouni@fst.rnu.tn, hamrouni@cril.univ-artois.fr} ... On the other hand, in many real... more ... {tarek.hamrouni@fst.rnu.tn, hamrouni@cril.univ-artois.fr} ... On the other hand, in many real-life applications like market basket analysis, medical data analysis, social network anal-ysis and bioinformatics, etc., the disjunctive connector link-ing items can bring key information as ...
One of the most powerful techniques to study protein structures is to look for recurrent fragment... more One of the most powerful techniques to study protein structures is to look for recurrent fragments (also called substructures or spatial motifs), then use them as patterns to characterize the proteins under study. An emergent trend consists in parsing proteins three-dimensional (3D) structures into graphs of amino acids. Hence, the search of recurrent spatial motifs is formulated as a process of frequent subgraph discovery where each subgraph represents a spatial motif. In this scope, several efficient approaches for frequent subgraph discovery have been proposed in the literature. However, the set of discovered frequent subgraphs is too large to be efficiently analyzed and explored in any further process. In this paper, we propose a novel pattern selection approach that shrinks the large number of discovered frequent subgraphs by selecting the representative ones. Existing pattern selection approaches do not exploit the domain knowledge. Yet, in our approach we incorporate the evolutionary information of amino acids defined in the substitution matrices in order to select the representative subgraphs. We show the effectiveness of our approach on a number of real datasets. The results issued from our experiments show that our approach is able to considerably decrease the number of motifs while enhancing their interestingness.
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Papers by Engelbert Mephu Nguifo