The hot springs bacterium Litorilinea aerophila PRI-4131 T (= ATCC BAA-2444 T ) was found in Isaf... more The hot springs bacterium Litorilinea aerophila PRI-4131 T (= ATCC BAA-2444 T ) was found in Isafjardardjup, in northwest Iceland. In this paper, we present a draft genome sequence for the type strain, with a total predicted genome length of 6,043,010 bp, 4,608 protein-coding sequences, 54 RNAs, 9 CRISPR arrays, and a G+C content of 64.61%.
Oceanospirillum multiglobuliferum ATCC 33336T is a motile gammaproteobacterium with bipolar tufte... more Oceanospirillum multiglobuliferum ATCC 33336T is a motile gammaproteobacterium with bipolar tufted flagella, noted for its low salt tolerance compared to other marine spirilla. This strain was originally isolated from the putrid infusions of Crassostrea gigas near Hiroshima, Japan. This paper presents a draft genome sequence for O. multiglobuliferum ATCC 33336T. Oceanospirillum multiglobuliferum ATCC 33336T ( strain OF1 or IFO 13614T) is a Gram-negative, strictly aerobic, motile gammaproteobacterium. O. multiglobuliferum (basionym Spirillum multiglobuliferum Terasaki 1973) was originally isolated from putrid infusions of the Pacific oyster, Crassostrea gigas, on a beach near Hiroshima, Japan, and shows variable morphology, with coccoid bodies predominant after 24 to 48 h of growth (1). Close relatives include Oceanospirillum linum, Oceanospirillum beijerinckii, Oceanospirillum maris, and Oceanospirillum nioese (1–4). O. multiglobuliferum is a halophile but has the lowest tolerance f...
Ureibacillus terrenus TH9A T (=ATCC BAA-384 T ) was isolated from uncultivated soil in Italy in 1... more Ureibacillus terrenus TH9A T (=ATCC BAA-384 T ) was isolated from uncultivated soil in Italy in 1995. We present a draft genome sequence for the type strain, with a predicted genome length of 2,936,851 bp, containing 2,766 protein-coding genes, 82 RNA genes, and 5 CRISPR arrays, with a G+C content of 42.5%.
We characterized the complete genome sequence of actinobacteriophage Yavru ( Siphoviridae ), a cl... more We characterized the complete genome sequence of actinobacteriophage Yavru ( Siphoviridae ), a cluster FE bacteriophage infecting Arthrobacter globiformis NRRL B-2979; it was 89.5% identical to cluster FE phage Whytu, with a capsid width of 50 nm and a tail length of 90 nm. The genome was 15,193 bp in length, with 23 predicted protein-coding genes.
The genome of the type strain of the Kurthia genus, Kurthia zopfii ATCC 33403, was sequenced. Non... more The genome of the type strain of the Kurthia genus, Kurthia zopfii ATCC 33403, was sequenced. Nonpathogenic K. zopfii has been isolated from intestinal contents, fecal material, meats, meat products, milk, water, and air, including air at high altitudes.
The aerobic, Gram-positive, psychrotolerant bacterium Kurthia sibirica was first isolated from th... more The aerobic, Gram-positive, psychrotolerant bacterium Kurthia sibirica was first isolated from the stomach and intestinal contents of the Magadan mammoth recovered from the permafrost in eastern Siberia in 1977. K. sibirica was sequenced, and the predicted genome size is 3,496,665 bp, with 36.42% G+C content.
The Gram-negative genus Kangiella contains a number of halophilic species that display high level... more The Gram-negative genus Kangiella contains a number of halophilic species that display high levels of iso-branched fatty acids. Kangiella spongicola was isolated from a marine sponge, Chondrilla nucula, from the Florida Keys in the United States. A genome assembly of 2,825,399 bp with a 44.31% G+C content was generated from strain A79T (=ATCC BAA-2076T).
Genomes from three strains of Kocuria rosea were sequenced. K. rosea ATCC 186, the type strain, w... more Genomes from three strains of Kocuria rosea were sequenced. K. rosea ATCC 186, the type strain, was 3,958,612 bp in length with a total G+C content of 72.70%. When assembled, K. rosea ATCC 516 was 3,862,128 bp with a 72.82% G+C content. K. rosea ATCC 49321 was 4,018,783 bp in size with a 72.49% G+C content.
The pigmented bacterium Deinococcus radiophilus, which is highly resistant to radiation exposure,... more The pigmented bacterium Deinococcus radiophilus, which is highly resistant to radiation exposure, was first isolated from irradiated lizardfish. We report a genome assembly of D. radiophilus UWO 1055T (=ATCC 27603T), with a predicted genome size of 2.7 Mbp (62.66% G+C content). A number of CRISPR-associated proteins and two CRISPR arrays were identified.
Lentibacillus salicampi SF-20T (=ATCC BAA-719T) was first isolated from a Yellow Sea salt field i... more Lentibacillus salicampi SF-20T (=ATCC BAA-719T) was first isolated from a Yellow Sea salt field in Korea in 2002. Here, we report that the L. salicampi ATCC BAA-719T genome sequence has a predicted length of 3,897,716 bp, containing 3,945 total genes and a CRISPR array, with a G+C content of 43.0%.
Xanthobacter tagetidis is a thiophene-degrading bacterium associated with root balls of the plant... more Xanthobacter tagetidis is a thiophene-degrading bacterium associated with root balls of the plant genus Tagetes , which includes marigolds. It is a Gram-negative facultatively autotrophic bacterium with pleomorphic morphology exhibiting bent and branching rods. From strain TagT2C T (= ATCC 700314 T ), we report a genome assembly of 4,945,221 bp and a 69.5% G+C content.
Oceanospirillum linum ATCC 11336 T is an aerobic, bipolar-tufted gammaproteobacterium first isola... more Oceanospirillum linum ATCC 11336 T is an aerobic, bipolar-tufted gammaproteobacterium first isolated in the Long Island Sound in the 1950s. This announcement offers a genome sequence for O. linum ATCC 11336 T , which has a predicted genome size of 3,782,189 bp (49.13% G+C content) containing 3,540 genes and 3,361 coding sequences.
The aerobic phenol-degrading Gram-negative rod Oceanimonas baumannii ATCC 700832 T was first isol... more The aerobic phenol-degrading Gram-negative rod Oceanimonas baumannii ATCC 700832 T was first isolated from estuary mud from the River Wear, United Kingdom, in 1983. Information on the draft genome sequence for O. baumannii ATCC 700832 T is included in this announcement. The predicted genome size is 3,809,332 bp, with 55.88% G+C content.
Oceanimonas doudoroffii ATCC 27123 T is an obligately aerobic Gram-negative rod of the class Gamm... more Oceanimonas doudoroffii ATCC 27123 T is an obligately aerobic Gram-negative rod of the class Gammaproteobacteria . It was first isolated from surface seawater off the coast of Oahu, HI, USA, in 1972. The predicted genome size is 3,832,938 bp (G+C content, 60.03%), which contains 3,524 predicted coding sequences.
The hot springs bacterium Litorilinea aerophila PRI-4131 T (= ATCC BAA-2444 T ) was found in Isaf... more The hot springs bacterium Litorilinea aerophila PRI-4131 T (= ATCC BAA-2444 T ) was found in Isafjardardjup, in northwest Iceland. In this paper, we present a draft genome sequence for the type strain, with a total predicted genome length of 6,043,010 bp, 4,608 protein-coding sequences, 54 RNAs, 9 CRISPR arrays, and a G+C content of 64.61%.
Oceanospirillum multiglobuliferum ATCC 33336T is a motile gammaproteobacterium with bipolar tufte... more Oceanospirillum multiglobuliferum ATCC 33336T is a motile gammaproteobacterium with bipolar tufted flagella, noted for its low salt tolerance compared to other marine spirilla. This strain was originally isolated from the putrid infusions of Crassostrea gigas near Hiroshima, Japan. This paper presents a draft genome sequence for O. multiglobuliferum ATCC 33336T. Oceanospirillum multiglobuliferum ATCC 33336T ( strain OF1 or IFO 13614T) is a Gram-negative, strictly aerobic, motile gammaproteobacterium. O. multiglobuliferum (basionym Spirillum multiglobuliferum Terasaki 1973) was originally isolated from putrid infusions of the Pacific oyster, Crassostrea gigas, on a beach near Hiroshima, Japan, and shows variable morphology, with coccoid bodies predominant after 24 to 48 h of growth (1). Close relatives include Oceanospirillum linum, Oceanospirillum beijerinckii, Oceanospirillum maris, and Oceanospirillum nioese (1–4). O. multiglobuliferum is a halophile but has the lowest tolerance f...
Ureibacillus terrenus TH9A T (=ATCC BAA-384 T ) was isolated from uncultivated soil in Italy in 1... more Ureibacillus terrenus TH9A T (=ATCC BAA-384 T ) was isolated from uncultivated soil in Italy in 1995. We present a draft genome sequence for the type strain, with a predicted genome length of 2,936,851 bp, containing 2,766 protein-coding genes, 82 RNA genes, and 5 CRISPR arrays, with a G+C content of 42.5%.
We characterized the complete genome sequence of actinobacteriophage Yavru ( Siphoviridae ), a cl... more We characterized the complete genome sequence of actinobacteriophage Yavru ( Siphoviridae ), a cluster FE bacteriophage infecting Arthrobacter globiformis NRRL B-2979; it was 89.5% identical to cluster FE phage Whytu, with a capsid width of 50 nm and a tail length of 90 nm. The genome was 15,193 bp in length, with 23 predicted protein-coding genes.
The genome of the type strain of the Kurthia genus, Kurthia zopfii ATCC 33403, was sequenced. Non... more The genome of the type strain of the Kurthia genus, Kurthia zopfii ATCC 33403, was sequenced. Nonpathogenic K. zopfii has been isolated from intestinal contents, fecal material, meats, meat products, milk, water, and air, including air at high altitudes.
The aerobic, Gram-positive, psychrotolerant bacterium Kurthia sibirica was first isolated from th... more The aerobic, Gram-positive, psychrotolerant bacterium Kurthia sibirica was first isolated from the stomach and intestinal contents of the Magadan mammoth recovered from the permafrost in eastern Siberia in 1977. K. sibirica was sequenced, and the predicted genome size is 3,496,665 bp, with 36.42% G+C content.
The Gram-negative genus Kangiella contains a number of halophilic species that display high level... more The Gram-negative genus Kangiella contains a number of halophilic species that display high levels of iso-branched fatty acids. Kangiella spongicola was isolated from a marine sponge, Chondrilla nucula, from the Florida Keys in the United States. A genome assembly of 2,825,399 bp with a 44.31% G+C content was generated from strain A79T (=ATCC BAA-2076T).
Genomes from three strains of Kocuria rosea were sequenced. K. rosea ATCC 186, the type strain, w... more Genomes from three strains of Kocuria rosea were sequenced. K. rosea ATCC 186, the type strain, was 3,958,612 bp in length with a total G+C content of 72.70%. When assembled, K. rosea ATCC 516 was 3,862,128 bp with a 72.82% G+C content. K. rosea ATCC 49321 was 4,018,783 bp in size with a 72.49% G+C content.
The pigmented bacterium Deinococcus radiophilus, which is highly resistant to radiation exposure,... more The pigmented bacterium Deinococcus radiophilus, which is highly resistant to radiation exposure, was first isolated from irradiated lizardfish. We report a genome assembly of D. radiophilus UWO 1055T (=ATCC 27603T), with a predicted genome size of 2.7 Mbp (62.66% G+C content). A number of CRISPR-associated proteins and two CRISPR arrays were identified.
Lentibacillus salicampi SF-20T (=ATCC BAA-719T) was first isolated from a Yellow Sea salt field i... more Lentibacillus salicampi SF-20T (=ATCC BAA-719T) was first isolated from a Yellow Sea salt field in Korea in 2002. Here, we report that the L. salicampi ATCC BAA-719T genome sequence has a predicted length of 3,897,716 bp, containing 3,945 total genes and a CRISPR array, with a G+C content of 43.0%.
Xanthobacter tagetidis is a thiophene-degrading bacterium associated with root balls of the plant... more Xanthobacter tagetidis is a thiophene-degrading bacterium associated with root balls of the plant genus Tagetes , which includes marigolds. It is a Gram-negative facultatively autotrophic bacterium with pleomorphic morphology exhibiting bent and branching rods. From strain TagT2C T (= ATCC 700314 T ), we report a genome assembly of 4,945,221 bp and a 69.5% G+C content.
Oceanospirillum linum ATCC 11336 T is an aerobic, bipolar-tufted gammaproteobacterium first isola... more Oceanospirillum linum ATCC 11336 T is an aerobic, bipolar-tufted gammaproteobacterium first isolated in the Long Island Sound in the 1950s. This announcement offers a genome sequence for O. linum ATCC 11336 T , which has a predicted genome size of 3,782,189 bp (49.13% G+C content) containing 3,540 genes and 3,361 coding sequences.
The aerobic phenol-degrading Gram-negative rod Oceanimonas baumannii ATCC 700832 T was first isol... more The aerobic phenol-degrading Gram-negative rod Oceanimonas baumannii ATCC 700832 T was first isolated from estuary mud from the River Wear, United Kingdom, in 1983. Information on the draft genome sequence for O. baumannii ATCC 700832 T is included in this announcement. The predicted genome size is 3,809,332 bp, with 55.88% G+C content.
Oceanimonas doudoroffii ATCC 27123 T is an obligately aerobic Gram-negative rod of the class Gamm... more Oceanimonas doudoroffii ATCC 27123 T is an obligately aerobic Gram-negative rod of the class Gammaproteobacteria . It was first isolated from surface seawater off the coast of Oahu, HI, USA, in 1972. The predicted genome size is 3,832,938 bp (G+C content, 60.03%), which contains 3,524 predicted coding sequences.
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Papers by Kyle MacLea