Article
Cite This: J. Nat. Prod. XXXX, XXX, XXX−XXX
pubs.acs.org/jnp
Alkaloids Purified from Aristotelia chilensis Inhibit the Human α3β4
Nicotinic Acetylcholine Receptor with Higher Potencies Compared
with the Human α4β2 and α7 Subtypes
Hugo R. Arias,† Marcelo O. Ortells,‡ Dominik Feuerbach,§ Viviana Burgos,⊥ and Cristian Paz*,⊥
†
Department of Pharmaceutical Science, School of Pharmacy, American University of Health Sciences, Signal Hill, California 90755,
United States
‡
Facultad de Medicina, Universidad de Morón, and CONICET, 1708 Morón, Buenos Aires, Argentina
§
Novartis Institutes for Biomedical Research, 4001 Basel, Switzerland
⊥
Laboratory of Natural Products and Drug Discovery, Department of Basic Sciences, Universidad de La Frontera, 4780000 Temuco,
Chile
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from https://pubs.acs.org/doi/10.1021/acs.jnatprod.9b00314.
S Supporting Information
*
ABSTRACT: The alkaloids aristoteline (1), aristoquinoline
(2), and aristone (3) were purified from the leaves of the
Maqui tree Aristotelia chilensis and chemically characterized by
NMR spectroscopy. The pharmacological activity of these
natural compounds was evaluated on human (h) α3β4, α4β2,
and α7 nicotinic acetylcholine receptors (AChRs) by Ca2+
influx measurements. The results suggest that these alkaloids
do not have agonistic, but inhibitory, activity on each receptor
subtype. The obtained IC50 values indicate the following
receptor selectivity: hα3β4 > hα4β2 ≫ hα7. In the particular case of hα3β4 AChRs, 1 (0.40 ± 0.20 μM) and 2 (0.96 ± 0.38
μM) show higher potencies compared with 3 (167 ± 3 μM). Molecular docking and structure−activity relationship results
indicate that ligand lipophilicity is important for the interaction with the luminal site located close to the cytoplasmic side of the
hα3β4 ion channel between positions -2′ and -4′. Compound 1 could be used as a molecular scaffold for the development of
more potent noncompetitive inhibitors with higher selectivity for the hα3β4 AChR that could serve for novel addiction and
depression therapies.
N
especially its berries, has antiproliferative, anti-inflammatory,
antioxidant, antimicrobial, cardio-protective, and nutritional
properties.6−9 The leaves of A. chilensis have shown high
content of noniridoid monoterpene indole alkaloids together
with polyphenolic compounds. 10,11 To have a more
comprehensive idea of the functional interaction of these
alkaloids with human (h) AChRs, the alkaloids aristoteline (1),
aristoquinoline (2), and aristone (3) were purified from the
leaves of the Maqui tree and chemically characterized by NMR
spectroscopy (Figure 1A). The pharmacological activity of
each compound was subsequently determined by Ca2+ influxinduced fluorescence detections using cell lines each expressing
only one of these AChR subtypes: hα3β4, hα4β2, or hα7. To
determine the most important molecular interactions underlying the differences in receptor selectivity and inhibitory
potencies among the compounds, molecular docking and
molecular dynamics were performed on the hα3β4 AChR
model using the recently determined X-ray crystal structure of
the hα4β2 AChR at 3.9 Å resolution.12 The results show for
the first time that alkaloids from A. chilensis, except 3,
icotinic acetylcholine receptors (AChRs) are members
of the ligand-gated ion channel superfamily that also
includes the GABAA, glycine, and serotonin type 3 receptors.1
The α4β2 and α7 AChRs are the most abundant subtypes in
the brain, whereas α3β4 AChRs are predominantly expressed
in the habenula, a brain area involved in the modulation of the
brain reward center in the midbrain.2 AChRs are involved in
many physiologically vital functions (e.g., muscle contraction,
homeostasis, cognition, learning, memory, pain signaling,
neuroprotection, and regulation of the immune responses)
and are targets for many natural products with agonistic (e.g.,
epibatidine, cytisine, anatoxin-a, and 6-bromohypaphorine)
and antagonistic (e.g., d-tubocurarine, methyllycaconitine,
coronaridine congeners, α-bungarotoxin, and α-conotoxins)
properties.2−4 Since the malfunctioning of AChRs, due to low
expression, mutations, and/or interaction with endogenous
ligands, may evolve in important neurological diseases (e.g.,
epilepsy, schizophrenia, Alzheimer’s and Parkinson’s diseases,
nicotine and drug addictions, and myasthenia and myasthenic
syndromes),2,5 the search for natural products with AChR
activity deserves special attention.
Maqui [Aristotelia chilensis (Molina) Stuntz, Elaecarpaceae]
is an evergreen tree found in southern Chile. The Maqui tree,
© XXXX American Chemical Society and
American Society of Pharmacognosy
Received: April 9, 2019
A
DOI: 10.1021/acs.jnatprod.9b00314
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Figure 1. (A) Molecular structure of alkaloids purified from the Maqui, A. chilensis, including 1, [(1H)indolo[2,3-g](3,5-ethanoquinoline), 2,2,5trimethyl-1,2,3,4,4a,5,11,11a-octahydro-], 3, [(1S,2R,4R,12S,15S,18R)-14,14,18-trimethyl-5,13-diazahexacyclo[13.3.1.02,13.04,12.04,18.06,11]nonadeca6,8,10-trien-16-one], and 2 [4-((1R,2S,5R)-4,4,8-trimethyl-3-azabicyclo[3.3.1]non-7-en-2-yl)quinoline]. (B) Molecular comparisons between
aristoteline (black) and bupropion (green). (C) 1 and (D) bupropion molecular surfaces colored by their atomic electrostatic potentials, from
more positive (blue) to more negative (red).
Figure 2. Functional activity of alkaloids purified from A. chilensis on HEK293-hα3β4 cells by using Ca2+ influx measurements. (A) (±)-Epibatidine
(1 μM) (■), but not aristoteline (100 μM) (○), enhanced intracellular calcium. The same results were found for the other alkaloids. Instead, 1.0
μM 1 inhibited (±)-epibatidine-evoked hα3β4 AChR activity (▲). The same inhibitory activity was found for the other alkaloids. (B) The
inhibitory activity of these alkaloids was investigated by pretreating (5 min) the cells with different concentrations of 1 (▼), 2 (⧫), and 3 (▲),
respectively, followed by hα3β4 activation with 0.1 μM (±)-epibatidine (■). Ligand response was normalized to the maximal (±)-epibatidine
response, which was set as 100%, and expressed as mean ± SD (n = 3). The calculated IC50 and nH values are summarized in Table 3.
and 13C NMR (Table 2S, Supporting Information). The results
are in excellent agreement with previous data of NMR and Xray studies.13−15 Interestingly, the shape and surface electrostatic potential correspondence between 1 and bupropion are
remarkable (Figure 1A−D). The benzene rings, the positive
ammonium nitrogens, and the side-chain methyl groups are
reasonably overlapped. The most important differences
between 1 and bupropion are that the natural compound is
a rigid molecule with a nitrogen atom in the indole moiety and
bupropion has a ketone as part of the side-chain moiety.
Pharmacologic Activity of Aristotelia Alkaloids on
Human AChRs. The potency of (±)-epibatidine to activate
each AChR subtype was first determined by assessing the
fluorescence change in HEK293-hα3β4 (Figure 2B), HEK293hα4β2 (Figure 3A), and GH3-hα7 (Figure 3B) cells after
noncompetitively inhibit hα3β4 AChRs with higher selectivity
compared with hα4β2 and hα7 AChRs, and its luminal binding
site is shared with that for bupropion. Since hα3β4 AChRs
directly and indirectly modulate the function of the brain
reward system,2 these results provide a foundation for further
animal studies to determine the potential antiaddictive and
antidepressive activity of 1 and 2.
RESULTS AND DISCUSSION
Chemical Characterization of Alkaloids Purified from
A. chilensis. The alkaloids 1, 2, and 3 (Figure 1) were isolated
from extracts of leaves of Aristotelia chilensis.
The structures of these natural alkaloids were subsequently
characterized by 1H NMR (Table 1S, Supporting Information)
■
B
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Figure 3. Inhibitory activity of alkaloids purified from A. chilensis on HEK293-hα4β2 (A) and GH3-hα7 (B) cells by using Ca2+ influx
measurements. The inhibitory activity of 1 (▼), 2 (⧫), and 3 (▲) was investigated on the respective hα4β2 (A) and hα7 (B) AChR subtype by
pretreating (5 min) the cells with different concentrations of each drug followed by AChR activation with 0.1 μM (A) or 1.0 μM (B)
(±)-epibatidine (■). The observed alkaloid-induced inhibition depended on the ligand and AChR subtype. Ligand response was normalized to the
maximal (±)-epibatidine response, which was set as 100%, and expressed as mean ± SD (n = 3). The calculated IC50 and nH values are summarized
in Table 3.
Table 1. Inhibitory Potency (IC50) for Alkaloids Purified from A. chilensis at hα3β4, hα4β2, and hα7 AChRsa
AChR subtype
inhibitory potency (μM)
1
2
3
hα3β4
IC50
nHb
IC50
nHb
IC50
nHb
IC50(hα4β2)/IC50(hα3β4)
IC50(hα7)/IC50(hα3β4)
0.40 ± 0.20
1.43 ± 0.10
3.4 ± 0.9
1.22 ± 0.26
27.0 ± 3.8
1.58 ± 0.21
8.4-fold
67.5-fold
0.96 ± 0.38
1.44 ± 0.14
6.7 ± 0.1
1.11 ± 0.27
45.3 ± 0.3
1.08 ± 0.27
7.0-fold
47.1-fold
167 ± 3
1.19 ± 0.04
145 ± 14
1.10 ± 0.08
no activity
―
no difference
―
hα4β2
hα7
a
These values were obtained from Figures 2B (hα3β4), 3A (hα4β2), and 3B (hα7), respectively. bHill coefficient.
(±)-epibatidine stimulation. The observed EC50 values for
each AChR subtype were in the same concentration range as
those previously determined.16,18−21 The agonistic activity of
several alkaloids purified from A. chilensis was subsequently
tested on different human AChR subtypes by direct
stimulation. The Ca2+ influx traces indicated that 1, in contrast
to (±)-epibatidine, does not have agonistic activity on hα3β4
AChRs (Figure 2A). The same results were obtained with the
other alkaloids on the studied AChRs (data not shown).
The inhibitory activity of these natural compounds was
subsequently assessed on hα3β4 (Figure 2B), hα4β2 (Figure
3A), and hα7 (Figure 3B) AChRs, respectively. Interestingly, 1
and 2 fully inhibited agonist-evoked AChR activity, whereas 3
showed slight (hα3β4 and hα4β2) or no (hα7) activity,
depending on the receptor subtype. In fact, whereas aristoteline decreased hα3β4 activity by 100% in the 10−100 μM
concentration range, 3 only reached ∼40% inhibition at 100
μM. The observed inhibitory potency (IC50) for the alkaloids
at the studied AChRs follows the rank order: 1 > 2 ≫ 3 (Table
1).
On the basis of the calculated IC50 values, the receptor
selectivity for the most active alkaloids clearly follows the
sequence: hα3β4 > hα4β2 ≫ hα7 (Table 1). In the case of 1,
the difference in potency between the hα3β4 AChR and the
other subtypes is 8.4- (hα4β2) and 67-fold (hα7), respectively.
The same trend is observed for 2. Although there are other
synthetic and hemisynthetic compounds that present higher
inhibitory potency at α3β4 AChRs [e.g., AT-1001 (a tropane
derivative) shows an IC50 value of 35 nM (determined by
Ca2+-induced fluorescence assays) and antiaddictive activity,17
this is the first time that a selective inhibitory activity on
human AChRs is shown for Aristotelia alkaloids.
The observed nH (Hill coefficient) values for Aristotelia
alkaloids at the studied AChRs are in general close to unity,
suggesting a noncooperative mechanism, whereas the values
for 1 and 2 at the hα3β4 and for 1 at the hα7 are clearly larger
than unity (Table 1), indicating a cooperative mechanism.
Correlation Between the Pharmacological Activity of
Aristotelia Alkaloids and Bupropion and Their Physicochemical Parameters. To determine the structure−
activity relationship for Aristotelia alkaloids (Figure 1A), a
series of physicochemical parameters were calculated (Table 2)
Table 2. Physicochemical Parameters of Aristotelia Alkaloids
and Bupropion
parameter
1
2
3
bupropion
polar surface area (PSA) (Å2)
LogP (lipophilicity)
molecular volume (Å3)
15.10
2.95
214.4
11.26
2.78
231.9
33.32
0.60
222.6
17.30
1.22
174.6
and subsequently correlated with the IC50 values determined
with hα3β4 AChR (Table 1). Considering that bupropion and
1 share the same luminal site (Figure 6D, see below), the
physicochemical parameters for the antidepressant were also
calculated (Table 2), and subsequently correlated with its IC50
value (2.30 ± 0.40 μM).20 Plot analyses indicated that there is
an opposite relationship between LogP (lipophilicity, Figure
4A) and PAS (Polar Surface Area, Figure 4B) values for 1, 2,
and bupropion. Nevertheless, when the 3 values are
C
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Figure 4. Correlation between the inhibitory potency (IC50) of 1 (○), 2 (△), 3 (□) (taken from Table 3), and bupropion (◊)20 against the hα3β4
AChR, and their respective LogP (lipophilicity) (A) and PSA (B) values (taken from Table 4). Plot analyses indicated that there is good correlation
for 1, 2, and bupropion, but not for 3, showing cutoff values of LogP < 1.2 (A) and PSA > 17 Å2 (B), when the respective 3 value is included.
considered, the plots showed cutoff values of LogP < 1.2
(Figure 4A) and PAS > 17 Å2 (Figure 4B), respectively.
Molecular Docking of 1 to the hα3β4, hα4β2, or hα7
AChRs. The DOPE score for the h(α3)3(β4)2, h(α4)3(β2)2,
or hα7 models were −245 702, −257 027, and −243 892,
respectively, compared to −257 162 for the X-ray hα4β2
AChR structure. The h(α4)3(β2)2 stoichiometry has almost
the same score as that for h(α4)2(β2)3, while the other two
models had slightly lower scores, indicating better, more stable,
structures.
Considering that 1 is the most potent ligand at the three
studied receptors, molecular docking experiments were
subsequently performed using this compound as an example
of Aristoteline alkaloids. Several conformers were found at
different domains of each AChR subtype. To select those
conformers according to the experimental data, linear
regression analyses between the calculated theoretical binding
energies (TBEs) (Table 3) and the experimental IC50 values
(Table 1) were performed on each AChR subtype.
Figure 5. Correlation between the inhibitory potency (IC50) of 1 for
the respective hα3β4 (□), hα4β2 (○), and hα7 (△) AChR (taken
from Table 3) and the corresponding TBE values (taken from Table
5) at the luminal (―) and vestibular (---) sites, respectively. Linear
regression analyses indicated excellent correlation with both luminal
(R2 = 0.999; P = 0.032) and vestibular (R2 = 1.000; P = 0.002) sites at
each receptor subtype.
interactions of 1 with the luminal (Figure 6D) and vestibular
(Figure 6E) sites are shown for this receptor subtype. In the
luminal site (Figure 6D), 1 contacted M2 residues located
closer to the cytoplasmic side of the ion channel, including α3C238 and β4-C239 (position -4′; currently considered part of
the M1-M2 Loop), α3-G239 and β4-G240 (position -3′), α3E240 and β4-E241 (position -2′, intermediate ring), β4-M243
(position 1′), and α3-T243 and β4-T244 (position 2′;
threonine ring) (Table 4). A strong H-bond is formed
between the hydrogen from the charged nitrogen (H−N+) of
1 and the oxygen (O) of the α3-E240 side chain (distance =
1.9 Å), which is observed with neither 3 nor 2. 1 and 3
established hydrophobic interactions with residues at positions
2′, 1′, -2′, and -4′. Several residues (i.e., O atoms) at positions
-2′ and -3′ formed weak H-bonds with both H−N+ and neutral
N (distances 3.2−3.6 Å) from either 1 or 3.
In the vestibular site (Figure 6E), 1 is positioned behind the
noncanonical β4+/α3- interface. The α3 residues P112 and
A113 (β5-β6 loop), Q114 (β6 Sheet), D134, D135, K136,
T137 (β6-β7 loop) and K138 (forming cation-π interactions
with both aristoteline rings) (β7 Sheet) belong to the Cys-loop
characteristic of this receptor superfamily.1 The β4 residues
include N21 (N terminal helix), A86, K87, R88, I89, W90,
L91, and D93 (β3-β4 loop), V95 (β4 Sheet), Y104 and E105
(forming two H-bonds) (β4-β5 loop), Y109 (forming a Hbond) (β5 Sheet), W122 (β6 Sheet), and W153 and T154
(β7-β8 loop) (Table 4).
Table 3. Theoretical Binding Energies (TBE) for the
Interaction of 1 with Either the Luminal or Vestibular Site
at the Respective hα3β4, hα4β2, and hα7 AChR
TBE (kcal/mol)
site
hα3β4
hα4β2
hα7
luminal (high-affinity)
vestibular (low-affinity)
−92.01
−57.10
−90.97
−53.01
−74.53
−22.00
The linear regressions showed two sites with significant
correlation values (Figure 5): a high-affinity binding site
located close to the cytoplasmic side of the ion channel, and a
low-affinity site located in the extracellular domain (ECD), on
the vestibular side of the noncanonical β2+/α4- interface
(Figure 6A). The MD simulations (20 ns) indicated that both
luminal (Figure 6B) and vestibular (Figure 6C) interactions
are quite stable at the three studied receptor subtypes. The
calculated RMSD variance obtained from the last third of the
simulation gave values ≤0.1 for both luminal [0.005 (hα3β4),
0.008 (hα4β2), and 0.026 (hα7)] and vestibular [0.016
(hα3β4), 0.007 (hα4β2), and 0.014 (hα7)] sites, consistent
with stable interactions.
The molecular docking results indicated no interaction with
the orthosteric sites, supporting a noncompetitive mechanism
of inhibition for the alkaloids. Based on the preference of these
alkaloids for the hα3β4 AChR, the detailed molecular
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Figure 6. Docking sites for 1 at the h(α3)3(β4)2 AChR model. (A) View of the h(α3)3(β4)2 AChR showing the high-affinity luminal (yellow) and
low-affinity vestibular (red) sites for 1 (surface model). α3 (white) and β4 (dark gray) subunits are represented as solid ribbons. (B, C) Molecular
dynamics simulations (20 ns) of 1 interacting with the respective luminal (B) and vestibular (C) site at the h(α3)3(β4)2 (----), h(α4)3(β2)2
(―), and hα7 (···) model, respectively. These results indicated that both luminal and vestibular interactions are stable. (D) In the luminal site, 1
(as sticks, and colored by atoms with carbons in dark gray) interacted with M2 residues located between positions 2′ (threonine ring ring) and -4′
(currently considered Loop M1-M2), forming a strong H-bond with α3-E240 (position -2′; intermediate ring) (distance = 1.9 Å) (thick blue line)
and several weak H-bonds (distances = 3.2−3.6 Å) (thin white dotted lines). (E) In the vestibular site, aristoteline interacted with several
extracellular substructures. In particular, α3-K138 (β7 Sheet) forms two cation-π interactions (red lines), whereas β4-E105 (β4-β5 loop) and β4Y109 (β5 Sheet) form H-bonds (thin white dotted lines) with 1. The complete list of residues interacting at each site is summarized in Table 4.
The interacting residues (as ball and sticks) are labeled by their subunit, residue one-letter code, and amino acid sequence number, and they are
colored by atoms, including carbon (green), nitrogen (blue), oxygen (red), and hydrogen (white).
The molecular docking results on the hα3β4 model
indicated that the inhibitory activity of 1 is mediated by two
different noncompetitive binding sites: a high-affinity luminal
site and a low-affinity vestibular site. The luminal site is located
close to the cytoplasmic side of the ion channel, between
positions 2′ and -4′. In this site, only aristoteline forms a strong
H-bond with the α3-E240 side chain (intermediate ring).
Interestingly, the site for 1 is located apart from those
previously found within the hα3β4 AChR ion channel,
suggesting singular interactions with Aristotelia alkaloids.
In general, ligands with antidepressant activity such as
tricyclic antidepressants (e.g., imipramine),16 selective serotonin reuptake inhibitors (e.g., fluoxetine),18 N,6-dimethyltricyclo [5.2.1.02,6]decan-2-amine enantiomers,24 and mecamylamine, 16 as well as antiaddictive compounds such as
coronaridine congeners (e.g., 18-methoxycoronaridine),19,20
interact with sites spread out between the middle and upper
portions of the ion channel (i.e., between positions 6′ and 20′).
On the other hand, the vestibular site is located within the
ECD, behind the noncanonical β2+/α4- interface. The
cooperative mechanism of inhibition (i.e., nH > 1) for 1 and
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Table 4. Residues Involved in the Docking of 1 to the Respective Luminal and Vestibular Site at the h(α3)3(β4)2 AChRa
residues (position) [interaction]
site
receptor domain
α3 subunit
β4 subunit
luminal (high-affinity)
M2
C238 (-4′; currently M1-M2 loop)
G239 (-3′) [1 MHB]
E240 (-2′) [4 SHB]
C239 (-4′; currently M1-M2 loop)
G240 (-3′) [1 MHB]
E241 (-2′)
M243 (1′)
T244 (2′)
vestibular (low-affinity)
ECD
β5-β6 loop
T243 (2′)
P112
A113
Q114
D134
D135
K136
T137
K138 [cation-π]
β6 sheet
β6-β7 loop (Cys-loop)
β7 sheet (Cys-loop)
NTH-β1 sheet loop
β3-β4 loop
W122
N21
A86
K87
R88
I89
W90
L91
D93
V95
Y104
E105 [2 SHB]
Y109 [1SHB]
W153
T154
β4 sheet
β4-β5 loop
β5 sheet
β7-β8 loop
a
MHB: Main chain donor hydrogen bond. SHB: Side chain donor hydrogen bond. NTH: N terminal helix.
calculated LogP cutoff (<1.2) might suggest that this
mechanism is limited for 3, which has a relatively lower
LogP value (0.60). Although each alkaloid forms several weak
H-bonds, only 3 has a relatively high PAS value, producing the
observed PAS cutoff at >17 Å2. This dichotomy might be due
to the fact that the aromatic rings present in these alkaloids are
not considered for the calculations of the PAS values.26 Thus,
the results support the view that ligand lipophilicity and the
strong H-bond found only for 1 are the most important
structural features for ligand binding.
This is the first time showing a noncompetitive inhibitory,
but not agonistic, activity of alkaloids purified from A. chilensis
on human AChRs, with higher selectivity for hα3β4 AChRs.
α3β4 AChR inhibition produces antiaddictive effects to many
different drugs of abuse, including nicotine.27 In the particular
case of bupropion, which inhibits α3β4 AChRs with relatively
higher selectivity,21 this antidepressant is also used to quit
smoking.28 In this regard, 1 could be used as a molecular
scaffold for the development of novel noncompetitive
antagonists with higher potency and higher selectivity for
α3β4-containing AChRs, and consequently better therapeutic
profile for the treatment of both depression and drug
addiction.
2 supports the existence of more than one noncompetitive site
in the hα3β4 AChR. Here, 1 could possibly interfere with the
subunit rotation and twisting movements known to be elicited
upon agonist binding,25 supporting inhibitory mechanisms
different to ion channel blockade.
Based on the structural and physicochemical similarity
between 1 and bupropion (Table 2; Figure 1B−D), additional
docking experiments were performed in the hα3β4 AChR
model to determine whether the antidepressant overlaps the
luminal site for 1. Since our hα3β4 AChR model is based on
the crystal structure of hα4β2 AChRs in the desensitized
state,12 our docking results likely reflect the interactions in the
desensitized hα3β4 AChR. The results indicated that
bupropion interacts with the luminal site but with lower
affinity than that for 1 (TBEs: −76 and −92 kcal/mol,
respectively), in agreement with the higher inhibitory potency
for 1 (0.40 ± 0.20 μM) compared to that for the
antidepressant (2.30 ± 0.40 μM).21
To determine what structural feature is important for ligand
interaction with the luminal site, structure−activity relationship
studies were performed. The results indicated that both LogP
(lipophilicity) and PAS values correlate, although in opposite
fashion, with the inhibitory potency of 1, 2, and bupropion, but
not with 3. To explain these results, the following scenario is
considered: the ligand interacts first with a hydrophobic
environment (e.g., upper portion of the ion channel) before
reaching its luminal site (i.e., cytoplasmic side). Previous
studies on the hα3β4 AChR showed that bupropion in fact
interacts with the upper portion of the ion channel.21 The
■
EXPERIMENTAL SECTION
General Experimental Procedures. Optical rotations were
recorded on a JASCO P-200 polarimeter (Tokyo, Japan). FTIR
spectra were measured on a Nicolet 6700 from Thermo Electron
Corporation with the ATR-unit Smart Performer. Melting points were
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determined on a Melting Point SMP10 (Stuart) uncorrected. The 1Hand 13C NMR spectra were recorded in MeOD or CDCl3 solution in
5 mm tubes at RT on a Bruker Avance III spectrometer (Bruker
Biospin GmbH, Rheinstetten, Germany) at 600.13 (1H) and 150.61
(13C) MHz, with the deuterium signal of the solvent as the lock and
TMS (for 1H) or the solvent (for 13C) as internal standard. All spectra
(1H, 13C, gs-H,H−COSY, edited HSQC, and gs-HMBC) were
acquired and processed with the standard Bruker software.
(±)-Epibatidine hydrochloride was obtained from Tocris Bioscience (Ellisville, MO, U.S.A.). Fetal bovine serum (FBS) and
trypsin/EDTA were purchased form Thermo Fisher Scientific
(Paisley, U.K.). Ham’s F-12 Nutrient Mixture was obtained from
Invitrogen (Paisley, U.K.). Fluo-4 was obtained from Molecular
Probes (Eugene, OR, U.S.A.). Probenecid was purchased from SigmaAldrich Chemie GmbH (Buchs, Switzerland). Silica gel (200−300
mesh) was obtained from Merck (Santiago, Chile). Solvents used in
this study were distilled prior to use and dried over appropriate drying
agents. Salts were of analytical grade.
Plant Material. Fresh leaves of A. chilensis (20 kg) were collected
on Concepción, Chile (S 36° 50’ 01.51’’ W 73° 01’ 53.75’’), in
December 2014. A voucher specimen (code Ach 2014-20) has been
deposited at the herbal collection of Department of Chemistry,
School of Engineering and Sciences, Universidad de La Frontera,
Chile.
Extraction and Isolation of Alkaloids from Aristotelia
chilensis. The dried and milled plant material from A. chilensis (8.5
kg) was extracted in acid/water (1:3 v/v) (30 L, pH 3, HCl) during 3
days at room temperature (RT) and filtered. The aqueous layer was
extracted with ethyl acetate (EtOAc) (3 × 10 L), and the organic
layer was evaporated under reduced pressure at 45 °C giving a gummy
residue (extract H+: 52 g). The acid water was alkalinized (pH 11,
NaHCO3−NaOH diluted) and subsequently extracted with EtOAc (3
× 15 L). The organic layer was evaporated under reduced pressure at
45 °C giving a gummy residue (extract OH−: 87 g). The crude OH−
extract (total alkaloid fraction, 87 g) was chromatographed using a
silica gel column (200−300 mesh) and increased solvent polarity
(from hexane 100% to EtOAc 100%), giving fractions B1−B9.
Fractions B1−B4 contained no alkaloids, only fatty acids and
chlorophylls. The fraction B6 (5.2 g) was separated by silica gel
chromatography using hexane/EtOAc (1:1 v/v), giving 3 (10 mg,
colorless crystals, 0.00012% yield). The fraction B7 (6.6 g) was
applied to a Sephadex LH-20 column and eluted with EtOAc, giving 1
(210 mg, colorless crystals, 0.0025% yield). The fraction B8 (2.1 g)
was also applied to the same column an eluted with EtOAc, but it was
further separated by silica gel chromatography using EtOAc, giving 2
(130 mg, yellow oil, 0.0015% yield).
Ca2+ Influx Measurements on Cell Lines Each Expressing
the hα4β2, hα3β4, or hα7 AChR Subtype. Ca2+ influx
measurements were performed on HEK293-hα4β2, HEK293-hα3β4,
and GH3-hα7 cells as previously described.16,18−23 Briefly, 5 × 104
cells per well were seeded 72 h prior to the experiment on black 96well plates (Costar, New York, U.S.A.) and incubated at 37 °C in a
humidified atmosphere (5% CO2/95% air). Under these conditions,
the majority of expressed hα4β2 and hα3β4 AChRs have the
(αx)3(βx)2 stoichiometry.21,22 16−24 h before the experiment, the
medium was changed to 1% FBS in HEPES-buffered salt solution
(HBSS) (130 mM NaCl, 5.4 mM KCl, 2 mM CaCl2, 0.8 mM MgSO4,
0.9 mM NaH2PO4, 25 mM glucose, 20 mM Hepes, pH 7.4). On the
day of the experiment, the medium was removed by flicking the
plates, and it was replaced with 100 μL of HBSS/1% FBS containing 2
mM Fluo-4 in the presence of 2.5 mM probenecid. The cells were
then incubated at 37 °C in a humidified atmosphere (5% CO2/95%
air) for 1 h.
To determine the antagonistic activity of the Aristotelia alkaloids
(Figure 1A), plates were flicked to remove excess of Fluo-4, washed
twice with HBSS/1% FBS, refilled with 100 μL of HBSS containing
the ligand under study, and incubated for 5 min. Plates were finally
placed in the cell plate stage of the fluorimetric imaging plate reader
(Molecular Devices, Sunnyvale, CA, U.S.A.), and (±)-epibatidine (0.1
μM for hα4β2 and hα3β4 AChRs or 1.0 μM for hα7 AChRs) was
added from the agonist plate to the cell plate using the 96-tip pipettor
simultaneously to fluorescence recordings for a total length of 78 s. To
determine the agonistic activity of either alkaloid or (±)-epibatidine,
each natural compound was added to the cell plate, and the
fluorescence was recorded for 78 s. A baseline consisting of 5
measurements of 0.4 s each was previously recorded. The excitation
and emission wavelengths are 488 and 510 nm, at 1 W, and a CCD
camera opening of 0.4 s. The concentration−response data were
curve-fitted by nonlinear least-squares analysis using the Prism
software (GraphPad Software, San Diego, CA, U.S.A.).
Theoretical Calculations of Physicochemical Parameters for
Aristotelia Alkaloids. To determine the physicochemical properties
of Aristotelia alkaloids (Figure 1A), several parameters were calculated
using Accelrys Discovery Studio 2.5., including LogP (i.e.,
liophilicity), polar surface Area (PSA), and molecular volume.
Molecular Docking of Aristotelia Alkaloids to h(α3)3(β4)2,
h(α4)3(β2)2, and hα7 AChRs. The h(α3)3(β4)2, h(α4)3(β2)2, and
hα7 AChR models were built using the X-ray structure (PDB ID:
5KXI) of the h(α4)2(β2)3 AChR at 3.9 Å resolution,12 as previously
described.21,22 Since the α4 subunit of this X-ray structure has two
more amino acids at the beginning of the mature peptide, the
sequence numbering is different from that previously used
(NP_000735 at www.ncbi.nlm.nih.gov). Since the authors deleted
almost entirely the M3-M4 cytoplasmic loop to be able to crystallize
the receptor, M4 is also numbered differently as previously. In both
cases, we kept the notation of the X-ray structure.
Each alkaloid (Figure 1A) was first modeled using VEGA ZZ.
Minimization and partial charge calculations were performed using
the MOPAC program as implemented in VEGA ZZ and employing
the semiempirical AM1 method. Each molecule was subsequently
docked into the whole h(α3)3(β4)2, h(α3)3(β4)2, and hα7 AChR
model using AutoDock Vina as previously described.21,22 The
parameters used were: exhaustiveness = 570 (the maximum value
allowed by our computational system), and maximum number of
modes = 20. To achieve dockings in few minutes time regime, no
flexible residues were allowed in the receptor model. The program
gives clusters of superposed conformations from the 20 lowest energy
binding poses.
Molecular Dynamics Simulations. To determine the stability of
each pose within its predicted docking site, 20 ns molecular dynamics
(MD) simulations were performed using NAMD and CHARMM
force field, and VEGA ZZ as interface as previously described.21,22
To estimate the root-mean-square deviation (RMSD) with respect
to the initial structure, the following equation was used:20,21
N
RMSD =
∑i = 1 ∂ i2
(1)
N
where N is the number of atoms from the ligand and ∂ is the distance
between the corresponding ligand atoms obtained at each step and
the starting conformation. The conformations during the simulation
were extracted every 10 ps from the simulation trajectory of 20 ns
total time by using VEGA ZZ. Only poses with a variance (VAR)
RMSD value below 1 during the last third of the MD were used in this
work.
Theoretical binding energies (TBE), measured from the individual
poses at the end of every MD, were calculated using molecular
mechanics as follows:21,22
TBE = CENERGY + L ENTROPY − (L ENERGY + R ENERGY)
(2)
where C is the complex between the ligand (L) and the receptor (R).
The TBE values are estimations used only for comparative purposes
among ligands and are not intended to represent absolute binding
energies. Larger negative TBE values indicate higher theoretical
binding affinities (TBAs).
G
DOI: 10.1021/acs.jnatprod.9b00314
J. Nat. Prod. XXXX, XXX, XXX−XXX
Journal of Natural Products
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Article
(21) Arias, H. R.; Feuerbach, D.; Ortells, M. Neurotransmitter 2018,
5, No. e1631.
(22) Arias, H. R.; Feuerbach, D.; Schmidt, B.; Heydenreich, M.; Paz,
C.; Ortells, M. O. J. Nat. Prod. 2018, 81, 811−817.
(23) Arias, H. R.; Feuerbach, D.; Ortells, M. O. Neurochem. Int.
2016, 100, 67−77.
(24) Arias, H. R.; Feuerbach, D.; Targowska-Duda, K. M.; Jozwiak,
K. J. Biochem. Mol. Biol. Res. 2015, 1, 19−24.
(25) Martin, N. E.; Malik, S.; Calimet, N.; Changeux, J. P.; Cecchini,
M. PLoS Comput. Biol. 2017, 13, No. e1005784.
(26) Caron, G.; Ermondi, G. Future Med. Chem. 2016, 8, 2013−
2016.
(27) Trott, O.; Olson, A. J. J. Comput. Chem. 2009, 31, 455−461.
(28) Arias, H. R.; Biała, G.; Słomka, M. K.; Targowska-duda, K.;
Biala, G.; Kruk-Slomka, M. Recept. Clin. Investig. 2014, 1, 30−45.
ASSOCIATED CONTENT
S Supporting Information
*
The Supporting Information is available free of charge on the
ACS Publications website at DOI: 10.1021/acs.jnatprod.9b00314.
1
H NMR data for alkaloids 1, 2, and 3 is provided in
Table 1S; 13C NMR data for alkaloids 1, 2, and 3 is
given in Table 2S (PDF)
■
AUTHOR INFORMATION
Corresponding Author
*E-mail for C.P.: cristian.paz@ufrontera.cl. Tel: +56-452592825.
ORCID
Cristian Paz: 0000-0002-4668-4984
Notes
The authors declare no competing financial interest.
ACKNOWLEDGMENTS
This study was supported by the grant REDI170107 and
FONDECYT 11181076 from the Chilean government (PI:
C.P.; Co-PI: H.R.A.).
■
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DOI: 10.1021/acs.jnatprod.9b00314
J. Nat. Prod. XXXX, XXX, XXX−XXX