New Isoflavan from Erythrina Livingstoniana
Nayang A. Kgakatsi,a,c Runner R.T. Majinda,a Ishmael B. Masesanea, Mutshinyalo S.
Nwamadi,b Taye B. Demissie,a Japheth O. Ombito,a Irene Gobed
a
Department of Chemistry, University of Botswana, Private Bag UB 0022, Gaborone,
Botswana
b
Spectrum, University of Johannesburg, P.O Box 524, Auckland Park, 2006. Cnr Kingsway
& University Roads, Auckland Park, Johannesburg, 2092, South Africa
c
d
Boitekanelo College, P.O Box 203156, Old Naledi Kiosk, Gaborone, Botswana
Department of Medical Laboratory Science, University of Botswana, Private Bag UB 0022,
Gaborone, Botswana
Correspondence: Nayang A. Kgakatsi; Email: kgakatsina@gmail.com;
nkgakatsi@boitekanelo.ac.bw
Abstract
Chemical investigation of the root wood of Erythrina livingstoniana led to the isolation of
one previously undescribed isoflavan (3S,3″R)-7-hydroxy-2′-methoxy-[3″-hydroxy-2″,2″dimethylpyrano (3′,4′)] isoflavan (1), together with eleven known compounds (2-12). The
structure of compound 1 was elucidated on the basis of extensive spectroscopic and
spectrometric analyses (1D and 2D-NMR and APCI-HRMS), with absolute configurations
established by comparison of experimental and DFT calculated ECD data. The assignment of
the absolute configurations of C-3 and C-3″ of compounds 2 and 3, respectively, were
reported for the first time. Compounds 1 - 4 were evaluated for their antibacterial activities in
vitro against E. coli ATCC 25922 and S. aureus ATCC 25923. Compound 1 exhibited
moderate antibacterial activity with MIC value of 0.063 mg/mL against the clinically relevant
risk-group 2 (RG-2) bacterium S. aureus.
Contents
1. Tables Lists
Table S1. 1H (500 MHz) and 13C NMR (125 MHz) spectroscopic data of compound 1
Table S2. 1H (500 MHz) and 13C NMR (125 MHz) spectroscopic data of compound 2
Table S3. 1H (500 MHz) and 13C NMR (125 MHz) spectroscopic data of compound 3
Table S4. Antibacterial activities of compounds 1 – 4
2. Figure Legends
Figure S1. APCI-HRMS spectrum of compound 1
Figure S2. 1H NMR (500 MHz, Acetone-d6) spectrum of compound 1
Figure S3. 13C NMR (125 MHz, Acetone-d6) spectrum of compound 1
Figure S4. DEPT 135 NMR (125 MHz, Acetone-d6) spectrum of compound 1
Figure S5. 1H–1H COSY (500 MHz, Acetone-d6) spectrum of compound 1
Figure S6. HMQC spectrum of compound 1 in Acetone-d6
Figure S7. HMBC spectrum of compound 1 in Acetone-d6
Figure S8. NOESY spectrum of compound 1 in Acetone-d6
Figure S9. Key 1H–1H COSY, 1H–1H NOESY, and HMBC correlations of compound 1
Figure S10. Experimental and calculated electronic circular dichroism (ECD) spectra of
compound 1
Figure S11. APCI-HRMS spectrum of compound 1
Figure S12. 1H NMR (500 MHz, Acetone-d6) spectrum of compound 2
Figure S13. 13C NMR (125 MHz, Acetone-d6) spectrum of compound 2
Figure S14. DEPT 135 NMR (125 MHz, Acetone-d6) spectrum of compound 2
Figure S15. 1H–1H COSY (500 MHz, Acetone-d6) spectrum of compound 2
Figure S16. HSQC spectrum of compound 2 in Acetone-d6
Figure S17. HMBC spectrum of compound 2 in Acetone-d6
Figure S18. Key 1H–1H COSY and HMBC correlations of compound 2
Figure S19. Experimental and calculated electronic circular dichroism (ECD) spectra of
compound 2
Figure S20. 1H NMR (500 MHz, Acetone-d6) spectrum of compound 3
Figure S21. 13C NMR (125 MHz, Acetone-d6) spectrum of compound 3
Figure S22. DEPT 135 NMR (125 MHz, Acetone-d6) spectrum of compound 3
Figure S23. 1H–1H COSY (500 MHz, Acetone-d6) spectrum of compound 3
Figure S24. HSQC spectrum of compound 3 in Acetone-d6
Figure S25. HMBC spectrum of compound 3 in Acetone-d6
Figure S26. NOESY spectrum of compound 3 in Acetone-d6
Figure S27. Key 1H–1H COSY, 1H–1H NOESY, and HMBC correlations of compound 3
Figure S28. Experimental and calculated electronic circular dichroism (ECD) spectra of
compound 3
1. Table Lists
Table S1 1H and 13C NMR spectroscopic data of compound 1
Position
1
a
δH, mult. J (Hz)
δC
b
2ax
3.94 m
70.2
2eq
4.17 dddd (8.8, 6.8, 3.6, 2.1)
3
3.47 tdd (11.0, 5.3, 3.6)
31.3
4
2.80 m
31.5
2.91 m
5
6.90 dd (8.3, 4.0)
130.1
6
6.39 ddd (8.3, 2.5, 1.4)
107.9
7
8
157.7
6.31 dd (2.5, 1.5)
102.8
9
155.1
10
113.4
1′
125.4
2′
156.9
3′
113.6
4′
153.1
5′
6.57 d (8.5)
112.9
6′
7.00 dd (8.5, 1.5)
125.5
1″
2″
76.6
3″
3.81 m
68.4
4″ax
2.71 ddd (17.2, 9.8, 7.8)
26.7
4″eq
3.05 dt (16.9, 6.0)
5″
1.26 s
19.6
6″
1.36 s
25.2
2′-OCH3
3.79 s
61.2
a
(500 MHz, acetone-d6); b(125 MHz, acetone-d6)
Table S2 1H and 13C NMR spectroscopic data of compound 2
Position
2
a
δH, mult. J (Hz)
δC
b
2ax
3.92 t (10.5)
2eq
4.17 ddd (10.4, 3.6, 2.1)
3
3.46 ddd (11.0, 5.3, 3.5)
31.4
4ax
2.80 ddd (15.7, 5.4, 2.1)
31.8
4eq
2.89 ddd (15.7, 11.3, 1.1)
5
6.90 d (8.2)
130.2
6
6.39 dd (8.2, 2.5)
107.9
7
8
70.4
157.7
6.32 dd (2.5)
102.8
9
155.1
10
113.5
1′
125.5
2′
157.4
3′
121.7
4′
155.0
5′
6.69 d (8.4)
111.4
6′
6.93 d (8.4)
125.0
1″
3.40 m
23.2
2″
5.31 tsep (7.3, 1.5)
123.6
3″
130.1
4″
1.68 d (1.5)
24.9
5″
1.79 d (1.3)
17.1
3.75 s
61.4
6″
2′-OCH3
a
(500 MHz, acetone-d6); b(125 MHz, acetone-d6)
Table S3: 1H and 13C NMR spectroscopic data of compound 3
Position
3
a
δH, mult. J (Hz)
δC
b
2
5.44 dd (13.1, 2.9)
79.7
3ax
2.68 ddd (16.7, 2.9, 1.5)
43.8
3eq
3.06 *dd (16.7, 13.1)
4
189.6
5
7.74 d (8.7)
128.6
6
6.59 dd (8.7, 2.3)
110.3
7
8
163.6
6.43 d (2.3)
102.8
9
164.5
10
114.3
1′
2′
128.5
*
7.28 m
128.3
3′
120.5
4′
153.4
5′
6.79 m
116.7
6′
7.28 m
125.8
1″
2″
68.9
3″
3.83 dd (9.5, 5.6)
77.2
4″eq
3.06 *dd (16.7, 13.1)
31.3
4″ax
2.78 ddd (16.7, 7.9, 2.9)
5″
1.27 s
19.9
6″
1.37 s
26.1
a
(500 MHz, acetone-d6); b(125 MHz, acetone-d6);
*Overlapping signals
Table S4. Antibacterial activities of compounds 1 – 4 (MIC, mg/mL).
Bacterial strains
Tested compounds
1
2
3
4
Streptomycin
S. aures ATCC 25923
0.063
0.125
0.125
0.125
0.005
E. coli ATCC 25922
1.000
1.000
1.000
1.000
0.001
2. Figure Lists
Figure S1. APCI-HRMS spectrum of compound 1
Figure S2. 1H NMR (500 MHz, Acetone-d6) spectrum of compound 1
Figure S3. 13C NMR (125 MHz, Acetone-d6) spectrum of compound 1
Figure S4. DEPT 135 NMR (125 MHz, Acetone-d6) spectrum of compound 1
Figure S5. 1H–1H COSY (500 MHz, Acetone-d6) spectrum of compound 1
Figure S6. HMQC spectrum of compound 1 in Acetone-d6
Figure S7. HMBC spectrum of compound 1 in Acetone-d6
Figure S8. NOESY spectrum of compound 1 in Acetone-d6
Figure S9. Key 1H–1H COSY and HMBC correlations of compound 1
Figure S10. Experimental and calculated electronic circular dichroism (ECD) spectra of
compound 1
Figure S11. APCI-HRMS spectrum of compound 2
Figure S12. 1H NMR (500 MHz, Acetone-d6) spectrum of compound 2
Figure S13. 13C NMR (125 MHz, Acetone-d6) spectrum of compound 2
Figure S14. DEPT 135 NMR (125 MHz, Acetone-d6) spectrum of compound 2
Figure S15. 1H–1H COSY (500 MHz, Acetone-d6) spectrum of compound 2
Figure S16. HSQC spectrum of compound 2 in Acetone-d6
Figure S17. HMBC spectrum of compound 2 in Acetone-d6
Figure S18. Key 1H–1H COSY and HMBC correlations of compound 2
Figure S19. Experimental and calculated electronic circular dichroism (ECD) spectra of
compound 2
Figure S20. 1H NMR (500 MHz, Acetone-d6) spectrum of compound 3
Figure S21. 13C NMR (125 MHz, Acetone-d6) spectrum of compound 3
Figure S22. DEPT 135 NMR (125 MHz, Acetone-d6) spectrum of compound 3
Figure S23. 1H–1H COSY (500 MHz, Acetone-d6) spectrum of compound 3
Figure S24. HSQC spectrum of compound 3 in Acetone-d6
Figure S25. HMBC spectrum of compound 3 in Acetone-d6
Figure S26. NOESY spectrum of compound 3 in Acetone-d6
Figure S27. Key 1H–1H COSY, 1H-1H NOESY, and HMBC correlations of compound 3
Figure S28. Experimental and calculated electronic circular dichroism (ECD) spectra of
compound 3