International Journal for Parasitology 35 (2005) 741–746
www.parasitology-online.com
Current opinion
Multi-host parasite species in cophylogenetic studies
Jonathan C. Banks*, Adrian M. Paterson
Bioprotection and Ecology Division, Lincoln University, P.O. Box 84, Canterbury 8150, New Zealand
Received 1 March 2005; received in revised form 21 March 2005; accepted 21 March 2005
Abstract
Cophylogenetic studies examine the relationship between host and parasite evolution. One aspect of cophylogenetic studies that has had
little modern discussion is parasites with multiple definitive hosts. Parasite species with multiple host species are anomalous as, under a
codivergence paradigm, speciation by the hosts should cause speciation of their parasites. We discuss situations such as cryptic parasite
species, recent host switching or failure to speciate that may generate multi-host parasites. We suggest methods to identify which of the
mechanisms have led to multi-host parasitism. Applying the suggested methods may allow multi-host parasites to be integrated more fully
into cophylogenetic studies.
q 2005 Australian Society for Parasitology Inc. Published by Elsevier Ltd. All rights reserved.
Keywords: Coevolution; Cophylogeny; Cospeciation; Failure to speciate; Phthiraptera; Sphenisciformes
Cophylogenetic studies of relationships between parasites and their hosts have been revitalised recently. Studies
have been conducted on diverse host–parasite assemblages
such as chewing lice and pocket gophers (Hafner et al.,
1994) and parasitic copepods and teleost fish (Paterson and
Poulin, 1999). The principles underpinning host–parasite
cophylogenetic studies have also been applied to other
systems such as herbivore–plant interactions (Futuyma and
McCafferty, 1990). Most, if not all, of these studies
investigate the origins of current associations, asking
whether they arose by descent or by colonisation.
Association by descent proposes that current host–parasite
associations have arisen because each host species has
inherited the association from its ancestral species.
Association by colonisation proposes that host switching,
a parasite switching to a host species from a lineage other
than the host’s ancestor, is the predominant explanation for
the parasites’ distributions (Brooks and McLennan, 1991).
Cophylogenetic studies have traditionally assessed the
extent of codivergence, i.e. parallel speciation in
* Corresponding author. Current address: Department of Entomology,
University of Illinois, 320 Morrill Hall, Urbana Champaign,
505 S. Goodwin Ave, Urbana, IL 61801, USA. Tel.: C1 217 265 8123;
fax: C1 217 244 3499.
E-mail address: jbanks@life.uiuc.edu (J.C. Banks).
the unrelated host and parasite lineages (Clayton et al.,
2003), by examining the degree of congruence between host
and parasite phylogenies. Incongruent host and parasite
phylogenies suggests host switching in the parasite lineage
(Brooks and McLennan, 1991). However, incongruence
does not necessarily imply host switching as congruence can
be hidden by other cophylogenetic events, such as sorting
(e.g. extinction) and duplication (intra-host speciation)
events (Paterson and Banks, 2001; Clayton et al., 2003).
Likewise, congruent host and parasite phylogenies do not
necessarily indicate a history of cospeciation as processes
other than cospeciation may generate ‘false’ congruence
(Clayton et al., 2003). False congruence can arise, for
example, if a parasite species has undergone a series
of sequential host switches, successively colonising the
host’s closest relatives and then speciating (Brooks and
McLennan, 1991).
While most of the events potentially affecting the
distribution of parasite species on their hosts have been
discussed, especially by Clay (1949), one aspect of
cophylogenetic studies that has had little modern discussion
is the distribution of a single parasite species on multiple
definitive host species (the host on which a parasite
reproduces sexually) and the influence such parasites have
on coevolutionary history. Studies of host–parasite interactions have often concentrated on the chewing lice, with
0020-7519/$30.00 q 2005 Australian Society for Parasitology Inc. Published by Elsevier Ltd. All rights reserved.
doi:10.1016/j.ijpara.2005.03.003
742
J.C. Banks, A.M. Paterson / International Journal for Parasitology 35 (2005) 741–746
gophers and their lice being a textbook example of host–
parasite cospeciation. As lice are able to coexist with their
hosts for evolutionary long periods, and have few
opportunities to transfer between host species, they should
be host specific and show a high degree of codivergence
with their hosts (Page and Hafner, 1996). Lice with multihost distributions at first appear to be somewhat anomalous
within a codivergence paradigm. However, louse species
infesting multiple host species are relatively common.
For example, eight of the 15 species of obligate ectoparasitic chewing lice, Phthiraptera, parasitising penguins,
Spheniscidae; two of the seven species of lice parasitising
kiwi, Apterygidae; and 13 of the 14 louse species
parasitising albatrosses, Diomedeidae, in the New Zealand
region, have multiple hosts (Price et al., 2003). Some louse
species have a very wide distribution indeed, for example,
the louse Menacanthus eurysternus (Burmeister, 1838)
parasitises 176 bird species in 100 genera and 34 families
and there are only three small bird orders on which all
species of lice are host specific (Price et al., 2003).
In this paper, we comment on the different processes that
may produce multi-host parasitism and how these processes
may mask instances of cospeciation or host switching by
parasites. We examine factors that enable populations of
multi-host parasites to remain in genetic contact despite
parasitising different host species and suggest that population genetic techniques may be required to fully explain
host–parasite associations.
We suggest the following explanations for the presence
of multi-host parasites:
(i)
(ii)
(iii)
(iv)
cryptic parasite species,
misclassified (over-split) hosts,
recent host switches,
failure to speciate by parasite populations despite their
host taxa diverging,
(v) incomplete host switching (sensu Clayton et al., 2003).
Note that for (i)–(iii), although the parasite populations
infesting divergent host taxa appear to be the same species,
the parasite populations are actually genetically isolated
from each other.
Parasite morpho-species may appear to have multiple
host species if parasite populations are isolated on their
hosts and have diverged genetically but the parasite species
are morphologically conservative, i.e. cryptic species.
Cryptic species can be identified relatively easily using
genetic data. The lack of morphological differences in the
parasites may be due to factors such as similar selection
pressures on the parasite species causing conservation of
morphology (Fig. 1A).
Cryptic species may also be present if morphological
convergence has occurred between parasite species that are
not closely related (Fig. 1B), for example, if the parasite
species face similar selection pressure. Once divergent
parasite taxa are identified from genetic data, they should be
A
A
I
B
A
I
B
II
B
I
C
Ci
I
Cii
A
I
A
I
B
I
B
I
D
E
A
I
A
I
B
I
B
I
Fig. 1. Stacked hypothetical phylogenies for host (solid lines) and parasite
(broken lines) morpho species representing the processes that can produce a
pattern of multi-host parasitism in cophylogenetic studies. Branch lengths
are proportional to time. The parasite phylogeny is displaced to the left
and is below the host phylogeny. Apparent multi-host parasites due to:
(A) Cryptic species. Parasite I is in reality two species but classified as a
single species due to failure to detect differences between the two
populations. (B) Morphological convergence. Parasite I is two species but
classified as a single species due to convergence. (Ci) Host switching,
recent. Parasite I is in reality two species but classified as a single species as
insufficient time has elapsed for differences to accumulate. (Cii) Host
switching, ancient. Parasite I is in reality two species but classified as a
single species as no differences have been identified, perhaps due to
morphological similarity. True multi-host parasites due to (D) failure to
speciate. Parasite I is a single species due to gene flow between parasite
populations. The double-headed broken arrows designate ongoing gene
flow between the parasite populations. (E) Host switching, incomplete.
Parasite I has colonised a new host species but the parasite populations on
the two host species are not genetically isolated from each other.
treated as separate taxa in cophylogenetic analyses and may
support either association by descent (Fig. 1A) or colonisation (Fig. 1C), depending on their position in the phylogeny.
Cryptic louse species parasitising doves have been
identified using genetic data. For example, the chewing
louse, Columbicola passerinae (Wilson, 1941) parasitising
the blue ground dove, Claravis pretiosa (Ferrari-Pérez,
1886), differs from C. passerinae parasitising the common
ground dove, Columbina passerina (L., 1758) by 11.3% for
a portion of the mitochondrial cytochrome oxidase c subunit
I (COI) gene suggesting the two louse populations could be
reclassified as two species (Johnson et al., 2002). The
chewing louse genus Physconelloides also contains multihost louse taxa implying considerably more host specificity
than apparent from a consideration of morpho-species alone
(Johnson et al., 2002).
Parasites may appear to have several hosts if host
‘species’ are over-split. If two host species are actually a
single species then a parasite species will appear to
J.C. Banks, A.M. Paterson / International Journal for Parasitology 35 (2005) 741–746
parasitise several host species. A robust alpha taxonomy for
both hosts and parasites is required for cophylogenetic
studies.
If a parasite colonises new host species, relative levels of
divergence between parasite populations established by the
host switching events can range anywhere from zero, if the
colonisation event occurred only recently (Fig. 1Ci), to
slightly less than the host species, if colonisation of the new
host species occurred just after the origin of that host species
(Fig. 1Cii). We stress that these are genetic distances that
have been adjusted for differences in the rates of divergence
in hosts and parasites. Next, we discuss reasons why
populations of a parasite species on different host species
could have few genetic differences in a fast evolving region
of the genome despite significant genetic differences in the
hosts (Table 1).
If a host switch has occurred recently, it seems likely that
a newly established population would be established from a
founding event of a few individuals colonising the new host
species and thus there will be less genetic diversity in the
newly established population compared with the parent
population. Lack of diversity within a population could be
used to distinguish a recent host switch from failure to
speciate and incomplete host switching (both of which will
also give rise to populations with no or few genetic
differences). Measures of genetic diversity within populations such as allele frequencies for microsatellite loci were
used to infer a founder event in the Western Australian
population of the parasitoid Diaeretiella rapae (M’Intosh,
1855) (Hymenoptera: Braconidae) that parasitises several
species of aphids (Baker et al., 2003).
True multi-host parasites occur when there is ongoing
gene flow between parasite populations infesting divergent
hosts. This can occur by two mechanisms—either failure to
speciate (Johnson et al., 2003) or incomplete host switching
(Clayton et al., 2003). Failure to speciate occurs when
parasite populations maintain genetic contact despite the
hosts diverging (Fig. 1D). Failure to speciate has also been
called inertia (Paterson and Banks, 2001) and cophylogeny
without cospeciation (Hugot et al., 2001). Failure to speciate
will generally occur between parasite populations on closely
Table 1
Cophylogenetic events possible when relative genetic distances (i.e. genetic
distances corrected for disparate rates of divergence in hosts and parasites)
between host species are compared to the genetic distances between their
parasite species (H is host, P is parasite). Events in italics are those that will
give rise to apparent and true multi-host parasites
Relative genetic distances
Possible
explanations
HZP
POH
P!H
P/H
Cospeciation
Duplication,
Over-split
host species
Host
switch
Very recent
host switch,
Failure to
speciate,
Incomplete
host switch
743
related host taxa as it requires that the parasite species are
inherited from the ancestor of the sibling host species.
Failure to speciate might occur when the hosts’ behavioural
or life history traits such as breeding site philopatry
reproductively isolate host populations while sufficient
contact between host taxa occurs at other times to allow
gene flow between parasite populations. Failure to speciate
supports association by descent.
One of several examples of possible failure to speciate in
the penguin lice is Austrogoniodes waterstoni (Cummings,
1914) that parasitise blue penguins, Eudyptula minor
(J.R. Forster, 1781) (Price et al., 2003). Austrogoniodes
waterstoni from Australia and New Zealand do not differ for
12S rRNA gene (342 bp, Genbank accession numbers
AY229913–AY229918) or cytochrome b (313 bp, Genbank
accession numbers AY345911–AY345916) despite the two
host populations showing relatively high levels of divergence (2.6% for third domain of the mitochondrial 12S
rRNA gene (12S) and 4% for cytochrome b (cyt b) (Banks
et al., 2002). The presence of birds of the Australian
haplotype in southern New Zealand (Banks et al., 2002)
may enable lice to transfer between the two host
populations.
A pattern similar to failure to speciate could be generated
if a parasite colonised the sister taxon of its original host,
and maintained genetic contact with the source population.
This is known as incomplete host switching (Clayton et al.,
2003). If an incomplete host switch has occurred, we would
expect that there would be an increase in the parasite
population size as the new niche is populated. Tests of
population growth such as Tajima’s D, Fu and Li’s F* and
D* and mismatch analyses could be applied to mitochondrial DNA of parasites on divergent hosts. These tests can
distinguish failure to speciate, where the parasite population
size has likely remained constant, from incomplete host
switching, where the parasite population size has likely
increased markedly following the colonisation event. These
analyses were applied to a study of Horsfield’s bronze
cuckoo, Chalcites basalis (Horsfield, 1821) a brood
parasite, and suggested that a range expansion to novel
host species had occurred (Joseph et al., 2002). Nested clade
analysis can also help distinguish between ongoing gene
flow and complete host switching to new host taxa.
Parasite populations may also show less divergence than
their host species if the rate of genetic change of parasites is
slower than that of their hosts. Generally parasites have
shorter generation times than their hosts and shorter
generation times have been shown to be associated with
faster rates of genetic change (Page and Hafner, 1996).
However, there are a few isolated examples of parasites
diverging more slowly than their hosts. Thus, multi-host
parasites need to be studied as part of a larger cophylogenetic study so that relative rates of host and parasite
divergence can be estimated.
Genetic contact between parasite species on divergent
hosts does not simply result from an absence of other
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J.C. Banks, A.M. Paterson / International Journal for Parasitology 35 (2005) 741–746
processes. It seems likely that multi-host parasites differ
from host specific parasite species in their behavioural or
life history characteristics. These differences might include
more opportunities to transfer between their different host
taxa, and once they transfer, better survival and higher
fecundity allowing the maintenance of gene flow between
parasite populations parasitising divergent hosts. Thus, we
predict that the hosts of multi-host parasites will have
overlapping ranges, multi-host parasites will have larger
populations than host specific parasites and there will be
fewer barriers to multi-host parasites surviving on divergent
hosts. We will now compare several characteristics of host
specific and multi-host chewing lice and their penguin
(Sphenisciformes) hosts.
As chewing lice have poor dispersal abilities (Page and
Hafner, 1996), ongoing gene flow between louse populations parasitising divergent host taxa requires contact
between their host species. For example, Austrogoniodes
cristati (von Kéler, 1952) parasitises all six species of
crested penguin (Eudyptes). One opportunity for populations
of A. cristati to maintain contact may be during the moult by
their hosts. All six crested penguin species moult, at least
occasionally on the Snares Islands (del Hoyo et al., 1992).
Hybridisation between host species may also break down
isolation between the parasites from different host species.
For example, rockhopper penguins, Eudyptes chrysocome
(Forster, 1781), have been reported to form mixed species
pairs with erect-crested, Eudyptes sclateri, Buller, 1888,
royal, Eudyptes schlegeli, Finsch, 1876, and macaroni,
Eudyptes chrysolophus (Brandt, 1873) penguins although
with limited breeding success (del Hoyo et al., 1992).
Dispersal of young hosts from natal colonies may be
another mechanism by which gene flow among parasite
populations may occur. For example, blue penguin juveniles
disperse widely until returning to their natal colonies after 2
or 3 years to breed (del Hoyo et al., 1992). Genetic contact
between louse populations on divergent host taxa may also
occur by phoresis, i.e. lice transferring between hosts by
attaching to the hippoboscid flies that parasitise many bird
species. We believe phoresis is unlikely to be a significant
method for lice to transfer between penguin taxa as we
could find no reports of hippoboscid flies in the Australasian
subantarctic region.
Louse abundance may be one factor that affects gene flow
between louse populations. For example, we examined 40
live emperor penguins, Aptenodytes forsteri, G.R. Gray,
1844, and found one specimen of the host specific louse
Austrogoniodes mawsoni, Harrison, 1937. Likewise we
examined 40 live Adelie penguins, Pygoscelis adeliae
(Hombron and Jacquinot, 1841) and found three of the host
specific louse Austrogoniodes antarcticus, Harrison, 1937 on
one bird, while on the other 39 Adelie penguins we found no
lice. In contrast, we found 25 females and 40 males of the
multi-host louse Austrogoniodes demersus (von Kéler, 1952)
on a single African penguin, Spheniscus demersus (L., 1758),
carcass. We have also seen differences in the abundance of
host specific and multi-host lice on the same host species. We
found a single male specimen of the host specific
Austrogoniodes vanalphenae, Banks and Palma, 2003 and
11 males of the multi-host Austrogoniodes concii (von Kéler,
1952) on 16 yellow-eyed penguin, Megadyptes antipodes
(Hombron and Jacquinot, 1841), carcasses.
We compared the number of host specific lice and multihost lice held in the Museum of New Zealand that have been
collected from individual penguins. We found that significantly fewer host specific lice were collected from
individual penguins (mean number of host specific lice
collected per hostZ4.9, SDZ4.1, n (hosts)Z66, mean
multi-host lice collected per hostZ8.0, SDZ10.1, n
(hosts)Z93, Student’s t-test PZ0.02). We suggest that the
higher abundance of multi-host lice might increase the
probability of transfer between divergent host taxa, which in
turn may help parasites maintain gene flow between
populations.
We also examined lice held in the Museum of New
Zealand collected from penguins that had the potential to be
infested by both host specific and multi-host lice and
calculated their prevalence, i.e. the number of host
individuals on which multi-host and host specific lice
were present or absent (Clayton et al., 2003). Multi-host lice
infested significantly more penguin hosts than did host
specific lice (Fisher exact test, c2Z15.48, 1 df, P!0.01).
We also compared the mean intensity, i.e. the number of
multi-host lice and host specific lice on an individual
(Clayton et al., 2003), collected from penguin host species
that could be parasitised by either multi-host or host specific
lice. Significantly more multi-host lice than host specific
lice (paired t-test, tZ2.417, 11 df, PZ0.04) had been
collected from penguins.
While we acknowledge that these results could have been
confounded by factors such as unequal host population size
and differences in sampling effort, the results suggest that
multi-host lice parasitised more host individuals than did
host specific lice and multi-host lice were more numerous
than host specific lice. Krasnov et al. (2004) found a similar
result for fleas parasitising small mammals. The higher
prevalence and intensity of multi-host lice may increase the
opportunities for gene flow to occur between populations of
multi-host lice infesting divergent host taxa.
Gene flow between parasite populations will also be
facilitated if there are weak barriers to parasite survival on
their alternative host taxa. For example, chewing lice evade
host grooming by inserting themselves between feather
barbs or by holding on to feather shafts (Clayton et al.,
2003). When lice were experimentally transferred to a new
host species, survival of lice was significantly reduced in
proportion to the mean difference in feather barb size of the
new and original hosts. Lice that did survive shifted their
microhabitat to feathers of mean barb diameter similar to
that of their original host. Thus there may be fewer barriers
to the maintenance of genetic contact between parasite
populations if the hosts are physically similar.
J.C. Banks, A.M. Paterson / International Journal for Parasitology 35 (2005) 741–746
The presence of multi-host lice is not as simple as
contact between host taxa allowing gene flow between
louse populations. Some host taxa are parasitised by both
host specific and multi-host lice. One example is the
rockhopper penguin, which is often subdivided into three
subspecies, the western, E. c. chrysocome, the eastern,
E. c. filholi and Moseley’s, E. c. moseleyi. All three
rockhopper subspecies are parasitised by A. cristati, but
within the rockhopper penguin species, the host specific
Austrogoniodes keleri, Clay, 1967 is present only on the
western rockhopper subspecies. Austrogoniodes concii
is only present on Moseley’s rockhopper penguin and
Austrogoniodes hamiltoni, Harrison, 1937 is present only
on the eastern rockhopper penguin, although both
A. concii and A. hamiltoni parasitise other penguin species
(Price et al., 2003).
The inability of multi-host louse species such as A. concii
and A. hamiltoni to parasitise populations within a species
suggests that multiple factors affect the host specificity of
parasites. Studying how the behavioural and life history
characteristics of both hosts and parasites affect the
distribution of parasites may be of value in predicting
which parasites are likely to switch to new hosts and could
be of use in identifying risks to economically or culturally
important species.
Generally cophylogenetic studies have concentrated on
host specific parasites as multi-host parasite species are
problematic for analyses (Johnson et al., 2003). Several
methods of analysing cophylogenetic data cannot deal with
multi-host parasites or else multi-host parasites make the
methods unwieldy (Johnson and Clayton, 2003). Although
multi-host parasites reduce congruence between host and
parasite phylogenies (Johnson and Clayton, 2003), they can
still contribute to association by descent. Suggestions to
deal with multi-host parasites include creating ‘dummy
lineages’ with a phylogeny matching the host phylogeny
(Page and Charleston, 2002). This method assumes that
multi-host parasites are an unresolved clade that more data
will resolve. However, creating dummy lineages for multihost parasite populations is justified only if the populations
are cryptic species. Alternatively, it has been assumed that
parasites have multiple hosts because of recent host
switching (Brooks et al., 2004). Others have applied the
principle of parsimony to resolve multi-host parasites
suggesting it is more parsimonious to infer failure to
speciate when multi-host parasites are present on closely
related hosts (Hugot et al., 2001). However, there are
potentially several reasons to explain the distribution of
parasites on multiple hosts. For parasite species with
multiple host taxa, and with few genetic differences between
populations, the application of population level genetic
techniques will be useful. If our goal is to explain why we
see particular host–parasite associations, it will be necessary
to consider the information carried by parasites with
multiple hosts. Recognition of the processes that can result
in multi-host parasites, much like the recognition of sorting
745
and duplication events, is necessary if the distribution of
parasites on their hosts is to be better understood.
Acknowledgements
Lincoln University and a Kelly Tarlton’s Antarctica
Scholarship supported this work. Thanks to R. Palma,
Museum of New Zealand for confirming our identifications
of louse specimens. Comments by R. Cruickshank,
K. Johnson, M. Kennedy, C. Vink, R. Page and two
anonymous reviewers improved this paper.
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