Expasy: Swiss Bioinformatics Resource Portal
e.g. BLAST, UniProt, MSH6, Albumin...

GAG-DB

  • Glycomics
  • Database
3D curated data extracted from the PDB on glycosaminoglycan (GAG) and GAG gligosaccharides in interaction with proteins. GAG mimetics are included. The entries describe structures of GAGs and GAG protein complexes obtained by a wide range of methods. The database structure reflects the classification of GAGs.
Browse the resource website

Developed by the Proteome Informatics group as a collaboration SIB-Grenoble-Lyon-Russia.

This resource is released under a Creative Commons Attribution International license CC BY 4.0.

You might also be interested in

      • Proteins & Proteomes
      • Glycomics
      • Database

    UniLectin

    Structural and functional classification of lectins
      • Proteins & Proteomes
      • Medicinal chemistry
      • , Structural analysis
      • Software tool

    SwissTargetPrediction

    Target prediction for bioactive small molecules
      • Glycomics
      • Database

    SugarBind

    Pathogen Sugar-Binding Database
      • Proteins & Proteomes
      • Systems Biology
      • Database
      • Software tool

    STRING

    Protein-protein interaction networks and enrichment analysis
      • Glycomics
      • Software tool

    Glynsight

    Visualise and compare glycan expression profiles
      • Proteins & Proteomes
      • Systems Biology
      • Database

    TCS

    Predict interaction specificity in bacterial signalling
      • Drug design
      • , Medicinal chemistry
      • Database
      • Software tool

    SwissDrugDesign

    Widening access to computer-aided drug design
      • Proteins & Proteomes
      • Database

    PROSITE

    Protein family and domain database
      • Proteins & Proteomes
      • Software tool

    ScanProsite

    Protein sequences against PROSITE
      • Glycomics
      • Database

    UniCarb-DB

    Glycan structures and associated mass spectrometry data
      • Proteins & Proteomes
      • Glycomics
      • Software tool

    Swiss Mass Abacus

    Intuitive calculator of peptide and glycopeptide masses
      • Glycomics
      • Software tool

    SugarSketcher

    Fast, intuitive, SNFG-compliant glycan structure drawing
      • Glycomics
      • Software tool

    GlyS3

    Match a glycan substructure to a database of full structures
      • Glycomics
      • Software tool

    Glydin'

    Network representation of known glycan determinants
      • Proteins & Proteomes
      • Glycomics
      • Software tool

    GlycoSiteAlign

    Multiple alignment of sequences around glycosylation sites
      • Proteins & Proteomes
      • Glycomics
      • Database
      • Software tool

    GlyConnect

    Integrated data platform to study glycosylation
      • Glycomics
      • Software tool

    GlycoDigest

    In silico digestion of glycans by exoglycosidases
      • Glycomics
      • Software tool

    EpitopeXtractor

    Compare glycan structures to Glydin' network's collection
      • Proteins & Proteomes
      • Glycomics
      • Software tool

    GlycoMod

    Possible oligosaccharide structures on proteins from masses
      • Proteins & Proteomes
      • Glycomics
      • Database

    Glyco@Expasy

    Zooming in on web-based glycoinformatics resources
      • Systems Biology
      • , Glycomics
      • Software tool

    HMO-Glycologue

    Simulator of Human Milk Oligosaccharide synthesis
      • Proteins & Proteomes
      • Glycomics
      • Software tool

    MzJava

    Open source Java class library to process MS fragmentation
      • Metabolomics
      • Software tool

    MSight

    Mass Spectrometry Imager