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Vicugna pacos (alpaca): 102542208
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Entry
102542208 CDS
T08098
Symbol
PRPH
Name
(RefSeq) peripherin
KO
K07607
peripherin
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc05014
Amyotrophic lateral sclerosis
vpc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102542208 (PRPH)
05022 Pathways of neurodegeneration - multiple diseases
102542208 (PRPH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
vpc04812
]
102542208 (PRPH)
Cytoskeleton proteins [BR:
vpc04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
102542208 (PRPH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF3944
Spc29
Motif
Other DBs
NCBI-GeneID:
102542208
NCBI-ProteinID:
XP_031538718
UniProt:
A0A6J3AYY1
LinkDB
All DBs
Position
12
AA seq
588 aa
AA seq
DB search
MASQGAALLIPSARDPAWSPHPVSPDAQLSSSGPVRGGPVLTGEPKSPWQAQQASAPRIL
QTIQAVSLYSWAACACILEAPCPPLGTCNSSVLETGSCQCILLSALAAAATPQPPPLPTS
GIALVPHHFPPPTARTLWATSPHLSPGAFSYSSSSRFSSSRLLGSASPGSSVRLGSFRGT
RAGAGALLRLPSERLDFSMAEALNQEFLATRSNEKQELQELNDRFANFIEKVRFLEQQNA
ALRGELSQARGQEPARADQLCQQELRELRRELELLGRERDRVQVERDGLAEDLAALKQRL
EEETRKREDAEHNLVLFRKDVDDATLSRLELERKIESLMDEIEFLKKLHEEELRDLQVSV
ESQQVQQVEVEATVKPELTAALRDIRAQYESIAAKNLQEAEEWYKSKYADLSYAANRNHE
ALRQAKQEMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEE
ELRQLKEEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVHSFASLSVKTTV
PEMEPPQESHSRKMVLIKTIETQDGEQVVTESQKEQRSELDKSSTHSY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggccagccagggagccgccctcctcatcccctcagccagagatccagcctggagtccc
catcctgtttccccagatgcccagctctcgtcctcagggccagtccgaggtggacctgtc
cttaccggagagcccaagagtccctggcaagcccaacaggcctcagcaccccggatcctg
cagaccatccaagctgtctctctctactcctgggcagcctgtgcctgcattctggaagcc
ccctgcccacccctgggtacctgcaactcctcagtactggaaaccggttcctgccagtgc
atccttctctcagccttggcagcagctgccacccctcagccccctccccttcctacctca
ggaattgccctggttccccatcacttcccacctcctaccgcccgcaccctttgggccacc
agccctcacctgtcccctggggctttctcctactcatccagctcccgcttctccagcagc
cgcctgctgggctcggcgtcccctggctcctccgtgcgcctgggcagcttccgcggtacc
cgggcgggtgcgggcgccctcctgcgcctgccctcggagcgcctcgacttctccatggcc
gaggccctcaaccaggagttcctggccacacgcagcaacgagaagcaggagctgcaggag
ctcaacgaccgcttcgccaactttattgaaaaggtgcgcttcctggagcagcagaacgcg
gccttgcgcggggagctgagccaggcccgaggccaggagccggcgcgcgccgaccagctg
tgccagcaggagctgcgggagctgcggagggagctagagctgctgggccgcgagcgcgac
cgggtgcaggtggagcgcgacgggctggcggaggacttggcagcactcaagcagaggctg
gaggaggagacgcgcaagcgggaggacgcggagcacaacctcgtgctcttccgcaaggac
gtggacgatgccaccctgtcccgcctggagctggagcgcaagattgagtctttgatggat
gagattgagtttctcaagaagctgcacgaggaggagctaagagacctgcaggtgagcgtg
gagagccagcaggtgcagcaggtcgaggtggaggcgaccgtgaagcccgagctgacggcg
gcgctgagggacatccgtgcccagtacgagagcatcgcggcgaagaacctgcaggaggca
gaagaatggtacaagtccaagtacgcggacctgtcgtacgccgccaaccggaaccatgag
gccctgcgccaggccaagcaggagatgaatgagtcccgacgccagatccagagtctgacg
tgcgaggtggacgggcttcgcggcacaaacgaggcgctgctcagacagctgagagagctg
gaagagcagtttgccctggaggccggtgggtaccaggcgggcgccgcgcggctcgaggaa
gagctgcgacagctaaaggaggagatggcgcgacacctgcgagagtaccaggagctcctt
aacgtcaagatggccctggacatcgagatcgccacctaccggaagctgctggagggcgag
gagagccggatctccgtgccagtccattcctttgcatccttaagtgtaaagacgactgtg
cctgagatggagcctccccaggagagccacagccggaagatggttctgatcaaaaccatt
gagacccaggatggggagcaggtggtgacagagtcccagaaggagcagcgcagtgagctg
gacaaatcttctactcacagctactga
DBGET
integrated database retrieval system
