A Review of Medical Image Registration for Different Modalities
Abstract
:1. Introduction
2. Materials and Methods
2.1. Alignment Metrics
2.2. Transformation Models
2.3. Optimization Methods
- Localization error: Arises when a key point is not accurately detected, causing their coordinates to shift. It can be minimized by using a good detection algorithm.
- Matching error: Measures the quality of key point detections by counting the number of false matches found between control point candidates.
- Alignment error: Arises when there are geometric distortions between images that deviate from the expected mapping model used for registration. This deviation can be quantified at the key point by calculating the mean squared error, providing a measure of the discrepancy between the actual and expected positions.
3. Classification of Image Registration Techniques
- Interaction [34]:
- Interactive: Involving active user participation, interactive registration allows users to guide the registration process actively. This approach is beneficial when human expertise and intuition are crucial in achieving accurate and meaningful alignments.
- Semi-Automated: Combining user input and automated algorithms, semi-automated registration strikes a balance between user expertise and computational efficiency. This approach is suitable for tasks where human input enhances the registration process.
- Feedback Integration: Incorporating user feedback during the registration process for real-time adjustments, this method ensures continuous refinement based on user input. Real-time adjustments contribute to the accuracy and efficiency of the registration outcome.
- Fully Automatic: Requiring minimal to no user intervention, fully automatic registration relies entirely on automated algorithms. This approach is suitable for scenarios where the registration task is well defined and can be efficiently executed without human intervention.
- Classical Methods:
- Correlation-based: This method is extensively used for registering monomodal images, playing a crucial role in medical applications. By computing the correlation between images, similarities and discrepancies are identified, allowing for image alignment essential for further analysis and evaluation in medical contexts [12].
- Entropy-based: Explores measures of entropy to quantify the information content and patterns within images. Particularly useful in multimodal image registration, this method enhances accuracy by incorporating spatial information into entropy estimation. This innovation aims to provide more reliable results, especially in scenarios where traditional methods may fall short [35].
- Mutual information-based: Leveraging pyramid and window-based techniques, mutual information-based methods estimate the probability of comparable voxels in registered images. This facilitates the alignment of images by maximizing the mutual information, offering an effective approach for establishing correspondence between features and achieving accurate alignment [36].
- Wavelet-based: This method utilizes wavelet techniques, offering both time and frequency selectivity. Wavelet-based techniques provide a valuable approach for accurate and efficient image registration across different scales and frequencies. The ability to capture information at various resolutions enhances the method’s adaptability to diverse scenarios [37].
- Contour-based: Involves matching image feature points using statistical features that describe object contours. With applications in remote sensing, medical imaging, and object recognition, this method leverages the distinctive properties of object boundaries to establish accurate correspondences and align images effectively [38].
- Learning-Based Methods:
- Soft Computing-Based: Integrates artificial neural networks [41], genetic algorithms [42], and fuzzy sets [43] to achieve precise image alignment. This sophisticated approach combines computational intelligence techniques with optimization strategies, resulting in improved accuracy and robustness in image registration outcomes.
- Curvatures-Based: Another approach in image registration involves curvatures-based methods, which focus on registering a sequence of corresponding points and searching for dimensional projection radiographs. These methods aim to find an optimal fit of the local curvatures in two curves to achieve accurate alignment. This approach is particularly useful in scenarios where the shapes or contours of objects are critical for alignment, such as in medical imaging or object recognition tasks [44].
- Learning-Based with CNNs: Leveraging convolutional neural networks (CNNs), this method autonomously learns registration patterns and deformable transformations directly from image data. CNNs enhance the accuracy, speed, and adaptability to various types of medical and multimodal images, making them a promising solution in modern image registration [45].
- Generative Adversarial Networks (GANs): Utilizing GANs, this method generates registered images directly with the deformation field, achieving accurate registration in real time. GANs’ ability to learn and generate realistic images makes them a cutting-edge solution in learning-based image registration [46].
4. Challenges in the Image Registration Process
4.1. Technical Challenges in Image Registration
- Complexity in Choosing and Implementing Similarity Metrics: Selecting appropriate similarity measures is another critical aspect of the registration process. Various measures, such as mutual information and correlation coefficient, are utilized to evaluate voxel intensity differences between source and target images. However, accurately estimating these measures, especially in the presence of noise and spatial variations, poses significant challenges.
- Outliers and Data Quality: Addressing outliers and rejecting erroneous data points is another ongoing challenge in medical image registration. Outliers can significantly impact the accuracy of registration results, particularly in image-guided surgery applications where an accurate alignment is crucial. Various methods, including robust statistical methods and outlier rejection algorithms, such as RANSAC (Random Sample Consensus), can minimize the impact of outliers. Consistency tests and intensity transformations can also be used to filter out erroneous data points, enhancing the reliability of the registration process. However, achieving robustness against outliers remains an area of active research.
- Optimization Convergence: The convergence of optimization methods to local maxima presents a significant obstacle in the registration process. Optimization techniques play a crucial role in finding the optimal transformation between images, but the risk of converging to the local maxima can compromise registration accuracy. Developing advanced optimization strategies that avoid the local maxima while improving the registration performance is essential for overcoming this challenge and advancing the field of medical image registration [48].
- Geometric Distortion: Geometric distortion, a common issue in remote sensing images, poses a significant challenge in medical imaging as well. Geometric distortion arises from attempts to represent three-dimensional images in two dimensions, leading to relief displacement. Scale distortion and skew distortion are two forms of geometric distortion that can lead to misalignments, complicating the registration process.
- Differences in Image Properties: Differences in images, such as variations in intensity, contrast, resolution, sensor characteristics, and environmental noise, present formidable challenges. Images captured at different wavelengths by diverse sensors and at various times may exhibit discrepancies in resolution, contrast, and illumination, making direct comparisons challenging. This disparity in image characteristics complicates the construction of descriptors that provide global information about feature points, hindering the matching process and contributing to misalignments during registration [49].
4.2. Multimodal Registration Challenges
4.3. Interpatient and Intra-Patient Registration Challenges
5. Summary
Author Contributions
Funding
Conflicts of Interest
References
- Li, Q.; Song, R.; Ma, X.; Liu, X. A robust registration algorithm for image-guided surgical robot. IEEE Access 2018, 6, 42950–42960. [Google Scholar] [CrossRef]
- Hammoudeh, A.; Dupont, S. Deep learning in medical image registration: Introduction and survey. arXiv 2024, arXiv:2309.00727. [Google Scholar] [CrossRef]
- Baum, Z.M.; Hu, Y.; Barratt, D.C. Meta-Learning Initializations for Interactive Medical Image Registration. IEEE Trans. Med. Imaging 2022, 42, 823–833. [Google Scholar] [CrossRef] [PubMed]
- Liu, J.; Singh, G.; Al’Aref, S.; Lee, B.; Oleru, O.; Min, J.K.; Dunham, S.; Sabuncu, M.R.; Mosadegh, B. Image Registration in Medical Robotics and Intelligent Systems: Fundamentals and Applications. Adv. Intell. Syst. 2019, 1, 1900048. [Google Scholar] [CrossRef]
- Chaabane, M.; Koller, B. A Systematic Literature Review on Multi-modal Medical Image Registration. In Proceedings of the Service-Oriented Computing—ICSOC 2022 Workshops, Sevilla, Spain, 29 November–2 December 2023; Springer: Cham, Switzerland, 2023; Volume 13821, pp. 111–126. [Google Scholar] [CrossRef]
- Jiang, X.; Ma, J.; Xiao, G.; Shao, Z.; Guo, X. A review of multimodal image matching: Methods and applications. Inf. Fusion 2021, 73, 22–71. [Google Scholar] [CrossRef]
- Fu, Y.; Lei, Y.; Wang, T.; Curran, W.J.; Liu, T.; Yang, X. Deep learning in medical image registration: A review. Phys. Med. Biol. 2020, 65, 20TR01. [Google Scholar] [CrossRef] [PubMed]
- Boveiri, H.R.; Khayami, R.; Javidan, R.; Mehdizadeh, A. Medical Image Registration Using Deep Neural Networks: A Comprehensive Review. Comput. Electr. Eng. 2020, 87, 106767. [Google Scholar] [CrossRef]
- Tetar, S.U.; Bruynzeel, A.M.; Oei, S.S.; Senan, S.; Fraikin, T.; Slotman, B.J.; van Moorselaar, R.J.A.; Lagerwaard, F.J. Magnetic resonance-guided stereotactic radiotherapy for localized prostate cancer: Final results on patient-reported outcomes of a prospective phase 2 study. Eur. Urol. Oncol. 2021, 4, 628–634. [Google Scholar] [CrossRef] [PubMed]
- Teatini, A.; Pelanis, E.; Aghayan, D.L.; Kumar, R.P.; Palomar, R.; Fretland, Å.A.; Edwin, B.; Elle, O.J. The effect of intraoperative imaging on surgical navigation for laparoscopic liver resection surgery. Sci. Rep. 2019, 9, 18687. [Google Scholar] [CrossRef] [PubMed]
- Nagaraju, N.; Savitri, T.S.; Swamy, C.A. Image Registration Using Scale Invariant Feature Transform. Int. J. Sci. Eng. Technol. 2013, 2, 675–680. [Google Scholar]
- Dong, Y.; Jiao, W.; Long, T.; He, G.; Gong, C. An Extension of Phase Correlation-Based Image Registration to Estimate Similarity Transform Using Multiple Polar Fourier Transform. Remote Sens. 2018, 10, 1719. [Google Scholar] [CrossRef]
- Tondewad, M.P.S.; Dale, M.M.P. Remote sensing image registration methodology: Review and discussion. Procedia Comput. Sci. 2020, 171, 2390–2399. [Google Scholar] [CrossRef]
- Shaharom, M.F.M.; Tahar, K.N. Multispectral Image Matching Using SIFT and SURF Algorithm: A Review. Int. J. Geoinform. 2023, 19, 13–21. [Google Scholar] [CrossRef]
- Niethammer, M.; Kwitt, R.; Vialard, F.-X. Metric learning for image registration. In Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, Long Beach, CA, USA, 15–20 June 2019; pp. 8463–8472. [Google Scholar] [CrossRef]
- Hu, J.; Luo, Z.; Wang, X.; Sun, S.; Yin, Y.; Cao, K.; Song, Q.; Lyu, S.; Wu, X. End-to-end multimodal image registration via reinforcement learning. Med. Image Anal. 2021, 68, 101878. [Google Scholar] [CrossRef] [PubMed]
- Soualmi, A.; Benhocine, A.; Midoun, I. Artificial Bee Colony-Based Blind Watermarking Scheme for Color Images Alter Detection Using BRISK Features and DCT. Arab J. Sci. Eng. 2023, 49, 3253–3266. [Google Scholar] [CrossRef]
- Semma, A.; Hannad, Y.; Siddiqi, I.; Djeddi, C.; El Kettani, M.E.Y. Writer identification using deep learning with fast keypoints and harris corner detector. Expert Syst. Appl. 2021, 184, 115473. [Google Scholar] [CrossRef]
- Liu, C.; Xu, J.; Wang, F. A review of keypoints’ detection and feature description in image registration. Sci. Program. 2021, 2021, 8509164. [Google Scholar] [CrossRef]
- Bedruz, R.A.R.; Fernando, A.; Bandala, A.; Sybingco, E.; Dadios, E. Vehicle classification using AKAZE and feature matching approach and artificial neural network. In Proceedings of the TENCON 2018—2018 IEEE Region 10 Conference, Jeju, Republic of Korea, 28–31 October 2018; IEEE: Piscataway, NJ, USA, 2018; pp. 1824–1827. [Google Scholar] [CrossRef]
- Bansal, M.; Kumar, M.; Kumar, M. 2D object recognition: A comparative analysis of SIFT, SURF and ORB feature descriptors. Multimed. Tools Appl. 2021, 80, 18839–18857. [Google Scholar] [CrossRef]
- Zhang, Z.; Sun, J.; Dai, Y.; Zhou, D.; Song, X.; He, M. Self-supervised Rigid Transformation Equivariance for Accurate 3D Point Cloud Registration. Pattern Recognit. 2022, 130, 108784. [Google Scholar] [CrossRef]
- Arora, P.; Mehta, R.; Ahuja, R. An Adaptive Medical Image Registration Using Hybridization of Teaching Learning-Based Optimization with Affine and Speeded Up Robust Features with Projective Transformation. Cluster Comput. 2023, 27, 607–627. [Google Scholar] [CrossRef]
- Wu, K. Creating Panoramic Images Using ORB Feature Detection and RANSAC-Based Image Alignment. Adv. Comput. Commun. 2023, 4, 220–224. [Google Scholar] [CrossRef]
- Rigaud, B.; Simon, A.; Castelli, J.; Lafond, C.; Acosta, O.; Haigron, P.; Cazoulat, G.; de Crevoisier, R. Deformable image registration for radiation therapy: Principle, methods, applications and evaluation. Acta Oncol. 2019, 58, 1225–1237. [Google Scholar] [CrossRef] [PubMed]
- Saha, S.K.; Xiao, D.; Bhuiyan, A.; Wong, T.Y.; Kanagasingam, Y. Color fundus image registration techniques and applications for automated analysis of diabetic retinopathy progression: A review. Biomed. Signal Process. Control 2019, 47, 288–302. [Google Scholar] [CrossRef]
- Zhao, P.; Chen, X.; Tang, S.; Xu, Y.; Yu, M.; Xu, P. Fast Recognition and Localization of Electric Vehicle Charging Socket Based on Deep Learning and Affine Correction. In Proceedings of the 2022 IEEE International Conference on Robotics and Biomimetics (ROBIO), Jinghong, China, 5–9 December 2022; IEEE: Piscataway, NJ, USA, 2022; pp. 2140–2145. [Google Scholar] [CrossRef]
- Khan, S.U.; Khan, M.A.; Azhar, M.; Khan, F.; Javed, M. Multimodal Medical Image Fusion Towards Future Research: A Review. J. King Saud Univ.-Comput. Inf. Sci. 2023, 35, 101733. [Google Scholar] [CrossRef]
- Song, G.; Han, J.; Zhao, Y.; Wang, Z.; Du, H. A Review on Medical Image Registration as an Optimization Problem. Curr. Med. Imaging 2017, 13, 274–283. [Google Scholar] [CrossRef] [PubMed]
- Chaudhury, A. Multilevel Optimization for Registration of Deformable Point Clouds. IEEE Trans. Image Process. 2020, 29, 8735–8746. [Google Scholar] [CrossRef] [PubMed]
- Tward, D.J. An Optical Flow Based Left-Invariant Metric for Natural Gradient Descent in Affine Image Registration. Front. Appl. Math. Stat. 2021, 7, 718607. [Google Scholar] [CrossRef]
- Dong, J.; Lu, K.; Xue, J.; Dai, S.; Zhai, R.; Pan, W. Accelerated Nonrigid Image Registration Using Improved Levenberg–Marquardt Method. Inf. Sci. 2018, 423, 66–79. [Google Scholar] [CrossRef]
- Zitova, B.; Flusser, J. Image Registration Methods: A Survey. Image Vis. Comput. 2003, 21, 977–1000. [Google Scholar] [CrossRef]
- El-Gamal, F.E.-Z.A.; Elmogy, M.; Atwan, A. Current Trends in Medical Image Registration and Fusion. Egypt. Inform. J. 2016, 17, 99–124. [Google Scholar] [CrossRef]
- Sabuncu, M.R. Entropy-Based Image Registration. Ph.D. Dissertation, Princeton University, Princeton, NJ, USA, 2006. [Google Scholar]
- Qiu, H.; Qin, C.; Schuh, A.; Hammernik, K.; Rueckert, D. Learning Diffeomorphic and Modality-Invariant Registration Using B-Splines. In Proceedings of the Medical Imaging with Deep Learning, Lübeck, Germany, 7–9 July 2021; Volume 143, pp. 645–664. [Google Scholar]
- Nanavati, M.; Shah, M. Performance Comparison of Different Wavelet-Based Image Fusion Techniques for Lumbar Spine Images. J. Integr. Sci. Technol. 2024, 12, 703. [Google Scholar]
- Loi, G.; Fusella, M.; Lanzi, E.; Cagni, E.; Garibaldi, C.; Iacoviello, G.; Lucio, F.; Menghi, E.; Miceli, R.; Orlandini, L.C.; et al. Performance of Commercially Available Deformable Image Registration Platforms for Contour Propagation Using Patient-Based Computational Phantoms: A Multi-Institutional Study. Med. Phys. 2018, 45, 748–757. [Google Scholar] [CrossRef] [PubMed]
- Haskins, G.; Kruger, U.; Yan, P. Deep learning in medical image registration: A survey. Mach. Vis. Appl. 2020, 31, 8. [Google Scholar] [CrossRef]
- Chen, X.; Diaz-Pinto, A.; Ravikumar, N.; Frangi, A.F. Deep learning in medical image registration. Prog. Biomed. Eng. 2021, 3, 012003. [Google Scholar] [CrossRef]
- Ho, T.T.; Kim, W.J.; Lee, C.H.; Jin, G.Y.; Chae, K.J.; Choi, S. An Unsupervised Image Registration Method Employing Chest Computed Tomography Images and Deep Neural Networks. Comput. Biol. Med. 2023, 154, 106612. [Google Scholar] [CrossRef] [PubMed]
- Arif, M.; Wang, G. Fast Curvelet Transform through Genetic Algorithm for Multimodal Medical Image Fusion. Soft Comput. 2020, 24, 1815–1836. [Google Scholar] [CrossRef]
- Orujov, F.; Maskeliūnas, R.; Damaševičius, R.; Wei, W. Fuzzy Based Image Edge Detection Algorithm for Blood Vessel Detection in Retinal Images. Appl. Soft Comput. 2020, 94, 106452. [Google Scholar] [CrossRef]
- Sun, J.; Zhang, J.; Zhang, G. An Automatic 3D Point Cloud Registration Method Based on Regional Curvature Maps. Image Vis. Comput. 2016, 56, 49–58. [Google Scholar] [CrossRef]
- Islam, K.T.; Wijewickrema, S.; O’Leary, S. A Deep Learning Based Framework for the Registration of Three-Dimensional Multi-Modal Medical Images of the Head. Sci. Rep. 2021, 11, 1860. [Google Scholar] [CrossRef] [PubMed]
- Mahapatra, D.; Antony, B.; Sedai, S.; Garnavi, R. Deformable Medical Image Registration Using Generative Adversarial Networks. In Proceedings of the 2018 IEEE 15th International Symposium on Biomedical Imaging (ISBI 2018), Washington, DC, USA, 4–7 April 2018; pp. 1449–1453. [Google Scholar] [CrossRef]
- Scopus. Available online: https://www.scopus.com (accessed on 12 June 2024).
- Alam, F.; Rahman, S.U.; Ullah, S.; Gulati, K. Medical Image Registration in Image Guided Surgery: Issues, Challenges and Research Opportunities. Biocybern. Biomed. Eng. 2018, 38, 71–89. [Google Scholar] [CrossRef]
- Faiza, B.; Yuhaniz, S.S.; Hashim, S.Z.M.; AbdulRahman, K.K. A Review and Analysis of Image Misalignment Problem in Remote Sensing. Int. J. Sci. Eng. Res. 2012, 3, 82–86. [Google Scholar]
- Noble, S.; Scheinost, D.; Finn, E.S.; Shen, X.; Papademetris, X.; McEwen, S.C.; Bearden, C.E.; Addington, J.; Goodyear, B.; Cadenhead, K.S.; et al. Multisite reliability of MR-based functional connectivity. Neuroimage. 2017, 146, 959–970. [Google Scholar] [CrossRef] [PubMed]
- Liu, F.-Y.; Chen, C.-C.; Chen, S.-C.; Liao, C.-H. A Practical Framework for ROI Detection in Medical Images—A case study for hip detection in anteroposterior pelvic radiographs. arXiv 2021, arXiv:2103.01584. [Google Scholar] [CrossRef]
- Monti, S.; Pacelli, R.; Cella, L.; Palma, G. Inter-patient image registration algorithms to disentangle regional dose bioeffects. Sci. Rep. 2018, 8, 4915. [Google Scholar] [CrossRef] [PubMed]
- Zou, J.; Liu, J.; Choi, K.-S.; Qin, J. Intra-Patient Lung CT Registration through Large Deformation Decomposition and Attention-Guided Refinement. Bioengineering 2023, 10, 562. [Google Scholar] [CrossRef] [PubMed]
Disclaimer/Publisher’s Note: The statements, opinions and data contained in all publications are solely those of the individual author(s) and contributor(s) and not of MDPI and/or the editor(s). MDPI and/or the editor(s) disclaim responsibility for any injury to people or property resulting from any ideas, methods, instructions or products referred to in the content. |
© 2024 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
Share and Cite
Darzi, F.; Bocklitz, T. A Review of Medical Image Registration for Different Modalities. Bioengineering 2024, 11, 786. https://doi.org/10.3390/bioengineering11080786
Darzi F, Bocklitz T. A Review of Medical Image Registration for Different Modalities. Bioengineering. 2024; 11(8):786. https://doi.org/10.3390/bioengineering11080786
Chicago/Turabian StyleDarzi, Fatemehzahra, and Thomas Bocklitz. 2024. "A Review of Medical Image Registration for Different Modalities" Bioengineering 11, no. 8: 786. https://doi.org/10.3390/bioengineering11080786