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17 pages, 2616 KiB  
Review
Cefiderocol in Combating Carbapenem-Resistant Acinetobacter baumannii: Action and Resistance
by Bahman Yousefi, Setayesh Kashanipoor, Payman Mazaheri, Farnaz Alibabaei, Ali Babaeizad, Shima Asli, Sina Mohammadi, Amir Hosein Gorgin, Tahereh Alipour, Valentyn Oksenych and Majid Eslami
Biomedicines 2024, 12(11), 2532; https://doi.org/10.3390/biomedicines12112532 - 6 Nov 2024
Viewed by 416
Abstract
Acinetobacter baumannii (A. baumannii) has emerged as a prominent multidrug-resistant (MDR) pathogen, significantly complicating treatment strategies due to its formidable resistance mechanisms, particularly against carbapenems. Reduced membrane permeability, active antibiotic efflux, and enzymatic hydrolysis via different β-lactamases are the main resistance [...] Read more.
Acinetobacter baumannii (A. baumannii) has emerged as a prominent multidrug-resistant (MDR) pathogen, significantly complicating treatment strategies due to its formidable resistance mechanisms, particularly against carbapenems. Reduced membrane permeability, active antibiotic efflux, and enzymatic hydrolysis via different β-lactamases are the main resistance mechanisms displayed by A. baumannii, and they are all effective against successful treatment approaches. This means that alternate treatment approaches, such as combination therapy that incorporates beta-lactams, β-lactamase inhibitors, and novel antibiotics like cefiderocol, must be investigated immediately. Cefiderocol, a new catechol-substituted siderophore cephalosporin, improves antibacterial activity by allowing for better bacterial membrane penetration. Due to its unique structure, cefiderocol can more efficiently target and destroy resistant bacteria by using iron transport systems. Through its inhibition of peptidoglycan formation through binding to penicillin-binding proteins (PBPs), cefiderocol avoids conventional resistance pathways and induces bacterial cell lysis. The possibility of resistance development due to β-lactamase synthesis and mutations in PBPs, however, emphasizes the need for continued investigation into cefiderocol’s efficacy in combination treatment regimes. Cefiderocol’s siderophore mimic mechanism is especially important in iron-limited conditions because it can use ferric-siderophore transporters to enter cells. Additionally, its passive diffusion through bacterial porins increases its intracellular concentrations, making it a good option for treating carbapenem-resistant A. baumannii, especially in cases of severe infections and ventilator-associated diseases (IVACs). Cefiderocol may reduce MDR infection morbidity and mortality when combined with customized antimicrobial treatments, but further investigation is needed to improve patient outcomes and address A. baumannii resistance issues. Full article
(This article belongs to the Section Drug Discovery, Development and Delivery)
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17 pages, 6613 KiB  
Review
A Mini-Review on the Use of Chelating or Reducing Agents to Improve Fe(II)-Fe(III) Cycles in Persulfate/Fe(II) Systems
by Lanbing Feng, Yun Zeng, Pan Wang, Na Duan, Haodong Ji and Xiao Zhao
Processes 2024, 12(11), 2361; https://doi.org/10.3390/pr12112361 - 28 Oct 2024
Viewed by 438
Abstract
Persulfates (PSs) have recently gained recognition as strong oxidants notably for soil and groundwater remediation. Ferrous iron (Fe(II)) has been extensively employed in activating PS. However, the PS/Fe(II) system still suffers from some inherent drawbacks, including the fast accumulation of ferric ion (Fe(III)) [...] Read more.
Persulfates (PSs) have recently gained recognition as strong oxidants notably for soil and groundwater remediation. Ferrous iron (Fe(II)) has been extensively employed in activating PS. However, the PS/Fe(II) system still suffers from some inherent drawbacks, including the fast accumulation of ferric ion (Fe(III)) or precipitation of Fe(III), sluggish conversion from Fe(III) to Fe(II), and the unwanted scavenging of SO4•− by excess Fe(II). To overcome these issues, the following two types of reagents are usually used: chelating agents and reducing agents. There are 11 chelating agents mentioned in this paper (EDTA, CA, etc.) and 3 reducing agents (HA, thiosulfate and A-Boron). This review extracted data from studies to give a data-based overview on how the added agents can improve the PS/Fe(II) system under varied conditions. The mechanisms of improvement by chelating agents could be classified into the following three categories: to control excess Fe(II), reduce Fe(III) to Fe(II), and inhibit Fe precipitation. The data analysis suggested an optimal working agent/Fe(II) ratio of 0–2 with acidic and neutral pH. The mechanism of using a reducing agent for PS/Fe(II) system improvement is simply reducing Fe(III) to Fe(II), using hydroxylamine, thiosulfate, etc. The improvement was significant at a hydroxylamine/Fe (II) molar ratio between 0 and 10, yet overdosed hydroxylamine can scavenge the reactive radicals, resulting in negative effects. The future research trend was also proposed in this review. Full article
(This article belongs to the Special Issue State-of-the-Art Wastewater Treatment Techniques)
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19 pages, 4996 KiB  
Article
Characterization of Heavy Minerals and Their Possible Sources in Quaternary Alluvial and Beach Sediments by an Integration of Microanalytical Data and Spectroscopy (FTIR, Raman and UV-Vis)
by Adel A. Surour and Amira M. El-Tohamy
Quaternary 2024, 7(4), 46; https://doi.org/10.3390/quat7040046 - 22 Oct 2024
Viewed by 497
Abstract
Quaternary stream sediments and beach black sand in north-western Saudi Arabia (namely Wadi Thalbah, Wadi Haramil and Wadi Al Miyah) are characterized by the enrichment of heavy minerals. Concentrates of the heavy minerals in two size fractions (63–125 μm and 125–250 μm) are [...] Read more.
Quaternary stream sediments and beach black sand in north-western Saudi Arabia (namely Wadi Thalbah, Wadi Haramil and Wadi Al Miyah) are characterized by the enrichment of heavy minerals. Concentrates of the heavy minerals in two size fractions (63–125 μm and 125–250 μm) are considered as potential sources of “strategic” accessory minerals. A combination of mineralogical, geochemical and spectroscopic data of opaque and non-opaque minerals is utilized as clues for provenance. ThO2 (up to 17.46 wt%) is correlated with UO2 (up to 7.18 wt%), indicating a possible uranothorite solid solution in zircon. Hafnoan zircon (3.6–5.75 wt% HfO2) is a provenance indicator that indicates a granitic source, mostly highly fractionated granite. In addition, monazite characterizes the same felsic provenance with rare-earth element oxides (La, Ce, Nd and Sm amounting) up to 67.88 wt%. These contents of radionuclides and rare-earth elements assigned the investigated zircon and monazite as “strategic” minerals. In the bulk black sand, V2O5 (up to 0.36 wt%) and ZrO2 (0.57 wt%) are correlated with percentages of magnetite and zircon. Skeletal or star-shaped Ti-magnetite is derived from the basaltic flows. Mn-bearing ilmenite, with up to 5.5 wt% MnO, is derived from the metasediments. The Fourier-transform infrared transmittance (FTIR) spectra indicate lattice vibrational modes of non-opaque silicate heavy minerals, e.g., amphiboles. In addition, the FTIR spectra show O-H vibrational stretching that is related to magnetite and Fe-oxyhydroxides, particularly in the magnetic fraction. Raman data indicate a Verwey transition in the spectrum of magnetite, which is partially replaced by possible ferrite/wüstite during the measurements. The Raman shifts at 223 cm−1 and 460 cm−1 indicate O-Ti-O symmetric stretching vibration and asymmetric stretching vibration of Fe-O bonding in the FeO6 octahedra, respectively. The ultraviolet-visible-near infrared (UV-Vis-NIR) spectra confirm the dominance of ferric iron (Fe3+) as well as some Si4+ transitions of magnetite (226 and 280 nm) in the opaque-rich fractions. Non-opaque heavy silicates such as hornblende and ferrohornblende are responsible for the 192 nm intensity band. Full article
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25 pages, 5747 KiB  
Article
Potential for the Recovery of Selected Metals and Critical Raw Materials from Slags from Polymineral Zn–Pb Ore Metallurgy—Part I
by Magdalena Cempa, Paweł Lejwoda, Klaudia Karabela, Anna Pieprzyca, Henryk Świnder and Arkadiusz Bauerek
Minerals 2024, 14(10), 1050; https://doi.org/10.3390/min14101050 - 19 Oct 2024
Viewed by 743
Abstract
Slags from the Silesia–Cracow Upland (Poland), including ten historical slags (deposited in waste dumps) and four contemporary slags (from current production), were examined to compare their chemical and mineralogical properties as well as to assess their potential for the recovery of selected metals [...] Read more.
Slags from the Silesia–Cracow Upland (Poland), including ten historical slags (deposited in waste dumps) and four contemporary slags (from current production), were examined to compare their chemical and mineralogical properties as well as to assess their potential for the recovery of selected metals and critical raw materials. The historical slags associated with the smelting of polymetallic ores originating from Mississippi Valley-type (MVT) deposits consisted primarily of gypsum. The contemporary slags, obtained from industrial waste rich in zinc and lead, were predominantly spinels (magnesium-aluminate and ferric) that exhibited higher iron content (up to 46.6 wt% of Fe2O3) compared to the historical slags (up to 26.1 wt% of Fe2O3). The zinc content was similar for both the slag types (3.5 wt% Zn). The average titanium and arsenic contents in the old and contemporary slags were at the same level as well, with 0.21 wt% (Ti) and 0.13 wt% (As), respectively. The contemporary slags contained higher levels of critical raw materials, such as cobalt, nickel, copper, and manganese, compared to the historical slags. Rare earth elements (REEs) were also more abundant in the contemporary slags, with an average content of 212 ppm, while the historical slags averaged 124 ppm. These findings underscore the potential for recovering valuable metals and critical raw materials from such slags, presenting opportunities for resource optimisation and environmental management. Full article
(This article belongs to the Special Issue Characterization and Reuse of Slag)
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18 pages, 3771 KiB  
Article
Neutrophil Diversity (Immature, Aged, and Low-Density Neutrophils) and Functional Plasticity: Possible Impacts of Iron Overload in β-Thalassemia
by Kritsanawan Sae-Khow, Awirut Charoensappakit and Asada Leelahavanichkul
Int. J. Mol. Sci. 2024, 25(19), 10651; https://doi.org/10.3390/ijms251910651 - 3 Oct 2024
Viewed by 613
Abstract
Neutrophil dysfunction is a form of immune suppression in patients with β-thalassemia (Beta-thal), although data on this are limited. In this study, blood from patients and healthy volunteers was analyzed. Flow cytometry analysis demonstrated an increase in immature neutrophils (CD16− CD62L+) and aged [...] Read more.
Neutrophil dysfunction is a form of immune suppression in patients with β-thalassemia (Beta-thal), although data on this are limited. In this study, blood from patients and healthy volunteers was analyzed. Flow cytometry analysis demonstrated an increase in immature neutrophils (CD16− CD62L+) and aged (senescent) neutrophils (CD16+ CD62L−) in Beta-thal patients compared to healthy volunteers. The Beta-thal neutrophils demonstrated less prominent chemotaxis and phagocytosis than healthy neutrophils at the baseline. With phorbol myristate acetate (PMA) or lipopolysaccharide (LPS) stimulations, some of the indicators, including the flow cytometry markers (CD11b, CD62L, CD66b, CD63, apoptosis, and reactive oxygen species) and neutrophil extracellular traps (NETs; detected by anti-citrullinated histone 3 immunofluorescence), were lower than the control. Additionally, low-density neutrophils (LDNs), which are found in the peripheral blood mononuclear cell (PBMC) fraction, were observed in Beta-thal patients but not in the control group. The expression of CD11b, CD66b, CD63, arginase I, and ROS in LDNs was higher than the regular normal-density neutrophils (NDNs). The proliferation rate of CD3+ T cells isolated from the PBMC fraction of healthy volunteers was higher than that of the cells from patients with Beta-thal. The incubation of red blood cell (RBC) lysate plus ferric ions with healthy NDNs transformed the NDNs into the aged neutrophils (decreased CD62L) and LDNs. In conclusion, iron overload induces neutrophil diversity along with some dysfunctions. Full article
(This article belongs to the Special Issue New Insights into Immune Dysregulation Disorders)
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16 pages, 4027 KiB  
Article
Walnut Shell Biomass Triggered Formation of Fe3C-Biochar Composite for Removal of Diclofenac by Activating Percarbonate
by Na Zhang, Yudong Huo, Chun Pei, Ying Zhang, Lijie Xu and Lu Gan
Catalysts 2024, 14(10), 687; https://doi.org/10.3390/catal14100687 - 3 Oct 2024
Viewed by 619
Abstract
Percarbonate (SPC) as a promising substitute for liquid H2O2 has many advantages in the application of in situ chemical oxidation (ISCO). Developing efficient, cost effective and environmentally friendly catalysts for SPC activation plays the key role in promoting the development [...] Read more.
Percarbonate (SPC) as a promising substitute for liquid H2O2 has many advantages in the application of in situ chemical oxidation (ISCO). Developing efficient, cost effective and environmentally friendly catalysts for SPC activation plays the key role in promoting the development of SPC-based ISCO. Herein, the walnut shell biomass was combined with ferric nitrate for the catalytic synthesis of Fe3C@biochar composite (Fe3C@WSB), which demonstrated high efficiency in activating SPC for the removal of diclofenac (DCF). The Fe3C showed average crystallite size of 32.6 nm and the composite Fe3C@WSB demonstrated strong adsorptivity. The prepared Fe3C@WSB could activate both SPC and H2O2 with high efficiency at ca. pH 3 with extremely low leaching of iron, while in a weak acidic condition, higher efficiency of DCF removal was obtained in the Fe3C@WSB/SPC process than in the Fe3C@WSB/H2O2 process. Moreover, the Fe3C@WSB/SPC and Fe3C@WSB/H2O2 processes did not show significant differences when supplied with varying amounts of catalyst or oxidant, but the Fe3C@WSB/SPC process exhibited stronger capability in dealing with relatively highly concentrated DCF solution. Based on quenching experiments and electron spin resonance (ESR) analysis, heterogeneous activation of SPC was assumed as the dominant route for DCF degradation, and both the oxidation by radicals, including •OH, •O2 and CO3•−, combined with electron transfer pathway contributed to DCF degradation in the Fe3C@WSB/SPC process. The cycling experiment results also revealed the stability of Fe3C@WSB. This work may cast some light on the development of efficient catalysts for the activation of SPC. Full article
(This article belongs to the Special Issue Advances in Catalytic Conversion of Biomass)
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19 pages, 3806 KiB  
Article
Normalization of Fetal Cerebral and Hepatic Iron by Parental Iron Therapy to Pregnant Rats with Systemic Iron Deficiency without Anemia
by Annette Burkhart, Kasper Bendix Johnsen, Tina Skjørringe, Asbjørn Haaning Nielsen, Lisa Juul Routhe, Sandra Hertz, Lisbeth Birk Møller, Lars Lykke Thomsen and Torben Moos
Nutrients 2024, 16(19), 3264; https://doi.org/10.3390/nu16193264 - 27 Sep 2024
Viewed by 854
Abstract
Background/Objectives: Iron (Fe) is a co-factor for enzymes of the developing brain necessitating sufficient supply. We investigated the effects of administering ferric derisomaltose/Fe isomaltoside (FDI) subcutaneously to Fe-deficient (ID) pregnant rats on cerebral and hepatic concentrations of essential metals and the expression of [...] Read more.
Background/Objectives: Iron (Fe) is a co-factor for enzymes of the developing brain necessitating sufficient supply. We investigated the effects of administering ferric derisomaltose/Fe isomaltoside (FDI) subcutaneously to Fe-deficient (ID) pregnant rats on cerebral and hepatic concentrations of essential metals and the expression of iron-relevant genes. Methods: Pregnant rats subjected to ID were injected with FDI on the day of mating (E0), 14 days into pregnancy (E14), or the day of birth (postnatal (P0)). The efficacy was evaluated by determination of cerebral and hepatic Fe, copper (Cu), and zinc (Zn) and gene expression of ferroportin, hepcidin, and ferritin H + L in pups on P0 and as adults on P70. Results: Females fed an ID diet (5.2 mg/kg Fe) had offspring with significantly lower cerebral and hepatic Fe compared to female controls fed a standard diet (158 mg/kg Fe). Cerebral Cu increased irrespective of supplying a standard diet or administering FDI combined with the standard diet. Hepatic hepcidin mRNA was significantly lower following ID. Cerebral hepcidin mRNA was hardly detectable irrespective of iron status. Conclusions: In conclusion, administering FDI subcutaneously to ID pregnant rats on E0 normalizes fetal cerebral and hepatic Fe. When applied at later gestational ages, supplementation with additional Fe to the offspring is needed to normalize cerebral and hepatic Fe. Full article
(This article belongs to the Special Issue Iron Deficiency and Iron-Related Disorders)
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16 pages, 2063 KiB  
Article
Postoperative Intravenous Iron Infusion in Anemic Colorectal Cancer Patients: An Observational Study
by Leonidas Chardalias, Androniki-Maria Skreka, Nikolaos Memos, Alexandra-Stavroula Nieri, Dimitrios Politis, Marianna Politou, Theodosios Theodosopoulos and Ioannis Papaconstantinou
Biomedicines 2024, 12(9), 2094; https://doi.org/10.3390/biomedicines12092094 - 13 Sep 2024
Viewed by 739
Abstract
Anemia is the most common extraintestinal symptom of colorectal cancer, with a prevalence of 30–75%. While the preoperative anemia in this patient population has been well studied and its correction 4–6 weeks prior to surgery is recommended when feasible, there is a paucity [...] Read more.
Anemia is the most common extraintestinal symptom of colorectal cancer, with a prevalence of 30–75%. While the preoperative anemia in this patient population has been well studied and its correction 4–6 weeks prior to surgery is recommended when feasible, there is a paucity of data regarding the management of postoperative anemia, which has a prevalence of up to 87% in these patients. To address this issue, we conducted an observational cohort study of surgically treated postoperative anemic patients with colorectal cancer. The objective of this study was to evaluate the effect of intravenous ferric carboxymaltose on the correction of postoperative anemia by postoperative day 30 (POD30). The primary outcome was the change in hemoglobin on POD30, while the secondary outcomes were the change in iron and other laboratory parameters, postoperative complications and transfusions. The results demonstrated that patients treated with intravenous iron exhibited a significant increase in hemoglobin levels by POD30, along with a concomitant increase in hematocrit, ferritin, and transferrin saturation levels, compared to the control group. The findings imply that patients undergoing colorectal cancer surgery with anemia that was not corrected in the preoperative setting may benefit from early postoperative intravenous iron infusion. Full article
(This article belongs to the Special Issue Advances in Iron Deficiency and Iron-Related Disorders)
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14 pages, 4237 KiB  
Article
Preparation of Nickel–Iron Concentrate from Low-Grade Laterite Nickel Ore by Solid-State Metalized Reduction and Magnetic Separation
by Wei Wang, Sichun Hu, Shoujing Wang, Hongzhao Liu, Deshui Yu, Lin Liu, Hongliang Wang and Ke Wang
Minerals 2024, 14(9), 926; https://doi.org/10.3390/min14090926 - 11 Sep 2024
Viewed by 694
Abstract
In this paper, the process of solid-state metalized reduction and magnetic separation was investigated for preparation of nickel–iron concentrate from a low-grade laterite nickel ore. The effects of reduction temperature, reduction time, amount of dosages, and magnetic field strength on grades and recoveries [...] Read more.
In this paper, the process of solid-state metalized reduction and magnetic separation was investigated for preparation of nickel–iron concentrate from a low-grade laterite nickel ore. The effects of reduction temperature, reduction time, amount of dosages, and magnetic field strength on grades and recoveries of nickel and iron were studied. The results showed that nickel–iron concentrate with a nickel grade of 7.32%, nickel recovery of 81.84%, iron grade of 78.74%, and iron recovery of 69.78% were obtained under the conditions of a reduction temperature of 1200 °C, reduction time of 120 min, calcium fluoride addition of 12%, ferric oxide addition of 10%, coal addition of 12%, and magnetic field strength of 170 kA/m. Full article
(This article belongs to the Section Mineral Processing and Extractive Metallurgy)
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19 pages, 3926 KiB  
Article
Analysis of High-Dose Ascorbate-Induced Cytotoxicity in Human Glioblastoma Cells and the Role of Dehydroascorbic Acid and Iron
by Alban Piotrowsky, Markus Burkard, Katharina Hammerschmidt, Hannah K. Ruple, Pia Nonnenmacher, Monika Schumacher, Christian Leischner, Susanne Berchtold, Luigi Marongiu, Thomas A. Kufer, Ulrich M. Lauer, Olga Renner and Sascha Venturelli
Antioxidants 2024, 13(9), 1095; https://doi.org/10.3390/antiox13091095 - 10 Sep 2024
Viewed by 814
Abstract
Several studies have demonstrated, both in vitro and in animal models, the anti-tumor efficacy of high-dose ascorbate treatment against a variety of tumor entities, including glioblastoma, the most common and aggressive primary malignant brain tumor. The aim of this study was to investigate [...] Read more.
Several studies have demonstrated, both in vitro and in animal models, the anti-tumor efficacy of high-dose ascorbate treatment against a variety of tumor entities, including glioblastoma, the most common and aggressive primary malignant brain tumor. The aim of this study was to investigate the effects of high-dose ascorbate as well as dehydroascorbic acid on human glioblastoma cell lines and to evaluate different treatment conditions for the combined administration of ascorbate with magnesium (Mg2+) and iron (Fe3+). Intracellular levels of reactive oxygen species and the induction of cell death following ascorbate treatment were also investigated. We demonstrated high cytotoxicity and antiproliferative efficacy of high-dose ascorbate in human glioblastoma cells, whereas much weaker effects were observed for dehydroascorbic acid. Ascorbate-induced cell death was independent of apoptosis. Both the reduction in cell viability and the ascorbate-induced generation of intracellular reactive oxygen species could be significantly increased by incubating the cells with Fe3+ before ascorbate treatment. This work demonstrates, for the first time, an increase in ascorbate-induced intracellular ROS formation and cytotoxicity in human glioblastoma cells by pre-treatment of the tumor cells with ferric iron, as well as caspase-3 independence of cell death induced by high-dose ascorbate. Instead, the cell death mechanism caused by high-dose ascorbate in glioblastoma cells shows evidence of ferroptosis. The results of the present work provide insights into the efficacy and mode of action of pharmacological ascorbate for the therapy of glioblastoma, as well as indications for possible approaches to increase the effectiveness of ascorbate treatment. Full article
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16 pages, 3770 KiB  
Article
Nutritional Value, Fatty Acid and Phytochemical Composition, and Antioxidant Properties of Mysore Fig (Ficus drupacea Thunb.) Fruits
by Hosakatte Niranjana Murthy, Guggalada Govardhana Yadav, Kadanthottu Sebastian Joseph, Sabha Khan H. S., Snehalata M. Magi, Yaser Hassan Dewir and Nóra Mendler-Drienyovszki
Foods 2024, 13(17), 2845; https://doi.org/10.3390/foods13172845 - 7 Sep 2024
Viewed by 933
Abstract
Ficus drupacea is a fruit-bearing tree that is distributed in Southeast Asia and Australia. The objective of this research was to ascertain the following with regard to ripened fruits: (i) their nutritional value, (ii) their mineral status, (iii) the fatty acid composition of [...] Read more.
Ficus drupacea is a fruit-bearing tree that is distributed in Southeast Asia and Australia. The objective of this research was to ascertain the following with regard to ripened fruits: (i) their nutritional value, (ii) their mineral status, (iii) the fatty acid composition of fruit and seed oil, (iv) their phytochemical makeup, and (v) their antioxidant properties. The ripened fruits contained 3.21%, 3.25%, 0.92%, 1.47%, and 2.20% carbohydrate, protein, fat, ash, and fiber, respectively. Fruits had an energy content of 30.18 kcal/100 g. In terms of mineral content, the fruit was rich in potassium, magnesium, calcium, and nitrogen, with values of 21.03, 13.24, 11.07, and 4.13 mg/g DW. Iron, zinc, manganese, and boron had values of 686.67, 124.33, 114.40, and 35.78 µg/g DW, respectively. The contents of oxalate and phytate were 14.44 and 2.8 mg/g FW, respectively. The fruit and seed oil content were 0.67 and 8.07%, respectively, and the oil’s physicochemical properties were comparable to those of fig fruit and seed oils. Omega-3 (α-linolenic acid), omega-6 (linoleic acid), and omega-9 (oleic acid) fatty acids were abundant in the oils. Fruit extracts in acetone, methanol, and water have greater concentrations of phenolics, flavonoids, and alkaloids. The 2,2-diphenyl-2-picrylhydrazyl, total antioxidant activity, and ferric reducing antioxidant power assays demonstrated increased antioxidant activities in close correlation with the higher concentrations of phenolics, flavonoids, and alkaloids. The results of this study demonstrate that the fruits of F. drupacea are a strong source of nutrients and phytochemicals, and they merit more investigation and thought for possible uses. Full article
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15 pages, 1832 KiB  
Article
Biophysical and Solution Structure Analysis of Critical Residues Involved in the Interaction between the PupB N-Terminal Signaling Domain and PupR C-Terminal Cell Surface Signaling Domain from Pseudomonas capeferrum
by Tajnin Sultana, David M. Morgan, Beau D. Jernberg, Peyton Zak, Sangita C. Sinha and Christopher L. Colbert
Biomolecules 2024, 14(9), 1108; https://doi.org/10.3390/biom14091108 - 3 Sep 2024
Viewed by 650
Abstract
Abstract: Cell surface signaling (CSS) is a means of rapidly adjusting transcription in response to extracellular stimuli in Gram-negative bacteria. The pseudobactin BN7/8 uptake (Pup) system not only imports iron but also upregulates its own transcription through CSS in Pseudomonas capeferrum. In [...] Read more.
Abstract: Cell surface signaling (CSS) is a means of rapidly adjusting transcription in response to extracellular stimuli in Gram-negative bacteria. The pseudobactin BN7/8 uptake (Pup) system not only imports iron but also upregulates its own transcription through CSS in Pseudomonas capeferrum. In the absence of ferric pseudobactin BN7/8, the signaling components are maintained in a resting state via the formation of a periplasmic complex between the N-terminal signaling domain (NTSD) of the outer membrane iron-transporter, PupB, and the C-terminal CSS domain (CCSSD) of the sigma regulator, PupR. The previously determined 1.6 Å crystal structure of this periplasmic complex has allowed us to probe the structural and thermodynamic consequences of mutating key interfacial residues. In this report, we describe the solution structure of the PupB NTSD and use Nuclear Magnetic Resonance spectroscopy, Isothermal Titration Calorimetry, and Circular Dichroism spectroscopy together with thermal denaturation to investigate whether three PupB point mutations, Q69K, H72D, and L74A, influence the interaction merely due to the chemical nature of the amino acid substitution or also cause changes in overall protein structure. Our results demonstrate that binding to the PupR CCSSD does not alter the structure of PupB NTSD and that the individual mutations have only minor effects on structure. The mutations generally lower thermodynamic stability of the NTSD and weaken binding to the CCSSD. These findings validate the X-ray crystal structure interface, emphasizing the importance of amino acid chemical nature at the interface. Full article
(This article belongs to the Section Molecular Biophysics)
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18 pages, 590 KiB  
Article
Chemical Composition, Antioxidant and Anti-Enzymatic Activities, and In Vitro Insecticidal Potential of Origanum compactum (Benth.) Essential Oils
by Mohamed Ouknin, Hassan Alahyane, Jean Costa and Lhou Majidi
Plants 2024, 13(17), 2424; https://doi.org/10.3390/plants13172424 - 30 Aug 2024
Viewed by 770
Abstract
This study aimed to investigate the variation in the chemical composition of Origanum compactum essential oils (EOs) from four geographically distinct locations. Additionally, we evaluated their antioxidant properties and potential inhibitory effects on acetylcholinesterase (AChE), tyrosinase, and α-glucosidase enzymes and their insecticidal proprieties. [...] Read more.
This study aimed to investigate the variation in the chemical composition of Origanum compactum essential oils (EOs) from four geographically distinct locations. Additionally, we evaluated their antioxidant properties and potential inhibitory effects on acetylcholinesterase (AChE), tyrosinase, and α-glucosidase enzymes and their insecticidal proprieties. Notably, this research also marks the first examination of the mineral composition of O. compactum. The chemical composition was determined using gas chromatography–mass spectrometry (GC-MS), which identified thymol (28.72–80.39%), carvacrol (6.54–61.84%), p-cymene (0.27–8.64%), linalool (1.44–1.96%), and caryophyllene oxide (1.34–1.56%) as the major constituents. Concurrently, inductively coupled plasma atomic emission spectroscopy (ICP-AES) revealed significant levels of macro and microelements, including calcium (295.50–512.20 mg/kg), potassium (195.99–398.45 mg/kg), magnesium (59.70–98.45 mg/kg), and iron (43.55–112.60 mg/kg). The EOs demonstrated notable antiradical activities through DPPH (1,1-diphenyl-2-picrylhydrazyl), FRAP (ferric reducing antioxidant power), and β-carotene bleaching assays. Regarding the insecticidal effect, all studied essential oils showed a significant toxicity against C. capitata adults, and the toxicity was dose and time dependent. The highest insecticidal effect was observed for O. compactum essential oils collected from Gouman (LC50 = 2.515 µL/mL, LC90 = 5.502 µL/mL) after 48 h of treatment. Furthermore, at a concentration of 1 mg/mL, the EOs exhibited strong inhibitory effects against AChE (84.75–94.01%), tyrosinase (84.75–94.01%), and α-glucosidase (79.90–87.80%), highlighting their potential as natural inhibitors of these enzymes. The essential oils of O. compactum contain components that could be used as a basis for synthetizing derivatives or analogs with potential medicinal applications and pest control properties. Full article
(This article belongs to the Special Issue Chemical Analysis, Bioactivity, and Application of Essential Oils)
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13 pages, 7974 KiB  
Article
Functional Identification of MhPYL4 Involved in Iron-Deficiency Stress in Malus Halliana Koehne
by Xiaoya Wang, Zhongxing Zhang, Yongjuan Dong and Yanxiu Wang
Plants 2024, 13(16), 2317; https://doi.org/10.3390/plants13162317 - 20 Aug 2024
Viewed by 749
Abstract
The PYL protein family are crucial sensors of the core signals of abscisic acid (ABA) and significantly influence the plant’s response to ABA-mediated abiotic stresses as well as its growth and development. However, research on the role of the MhPYL4 gene in iron [...] Read more.
The PYL protein family are crucial sensors of the core signals of abscisic acid (ABA) and significantly influence the plant’s response to ABA-mediated abiotic stresses as well as its growth and development. However, research on the role of the MhPYL4 gene in iron (Fe) deficiency in apple trees is limited. Studies have shown that the MhPYL4 gene, when exposed to Fe-deficiency stress, exhibits more rapid transcriptional upregulation than other genes’ quickly elevated transcription. However, the precise mechanism by which it alleviates this stress remains unclear. The MhPYL4 gene (ID:103432868), isolated from Malus halliana, was analyzed to elucidate its function. Arabidopsis plants engineered to overexpress the MhPYL4 gene exhibited increased leaf chlorosis and slower growth in response to Fe stress compared to the unmodified controls. The transgenic plants also exhibited elevated levels of superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT) activities, as well as ferric chelate reductase (FCR) activities. Levels of malondialdehyde (MDA), hydrogen peroxide (H2O2), and superoxide anion (O2) were increased. In addition, these transgenic plants had lower concentrations of proline (Pro) and Fe2+, which indicated that their stress tolerance was reduced. Similarly, the overexpression of MhPYL4 in apple calli resulted in inhibited growth and increased susceptibility under Fe stress conditions. Physiological evaluations indicated that the overexpression of MhPYL4 in Arabidopsis reduced its Fe stress tolerance by inhibiting chlorophyll synthesis. In apple calli, it altered pH levels, antioxidant enzyme activity, and Fe-reducing capabilities under the same stress conditions. In summary, the elevated expression of the MhPYL4 gene reduced the tolerance of both Arabidopsis and apple calli to Fe stress, suggesting that MhPYL4 acts as a negative regulator in response to Fe deficiency. Full article
(This article belongs to the Section Plant Response to Abiotic Stress and Climate Change)
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13 pages, 2239 KiB  
Review
Structural Perspectives on Metal Dependent Roles of Ferric Uptake Regulator (Fur)
by Sung-Min Kang, Hoon-Seok Kang, Woo-Hyun Chung, Kyu-Tae Kang and Do-Hee Kim
Biomolecules 2024, 14(8), 981; https://doi.org/10.3390/biom14080981 - 9 Aug 2024
Viewed by 763
Abstract
Iron is crucial for the metabolism and growth of most prokaryotic cells. The ferric uptake regulator (Fur) protein plays a central role in regulating iron homeostasis and metabolic processes in bacteria. It ensures the proper utilization of iron and the maintenance of cellular [...] Read more.
Iron is crucial for the metabolism and growth of most prokaryotic cells. The ferric uptake regulator (Fur) protein plays a central role in regulating iron homeostasis and metabolic processes in bacteria. It ensures the proper utilization of iron and the maintenance of cellular functions in response to environmental cues. Fur proteins are composed of an N-terminal DNA-binding domain (DBD) and a C-terminal dimerization domain (DD), typically existing as dimers in solution. Fur proteins have conserved metal-binding sites named S1, S2, and S3. Among them, site S2 serves as a regulatory site, and metal binding at S2 results in conformational changes. Additionally, as a transcriptional regulator, Fur specifically binds to a consensus DNA sequence called the Fur box. To elucidate the structural and functional properties of Fur proteins, various structures of metal- or DNA-bound Fur proteins or apo-Fur proteins have been determined. In this review, we focus on the structural properties of Fur proteins according to their ligand-bound state and the drug development strategies targeting Fur proteins. This information provides valuable insights for drug discovery. Full article
(This article belongs to the Topic Metalloproteins and Metalloenzymes)
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