Search Results (78)

Glomus mongioiense, a new species of arbuscular mycorrhizal fungi (AMF) in the family Glomeraceae, was isolated from rhizosphere soil collected from a meadow in the Italian Alps. The novelty of the species and its relationship with other species of the same genus were obtained by morphological and phylogenetic (45S nrDNA + RPB1 gene) analyses. Two glomoid spore-producing AMF isolates from a saltmarsh of the Scottish Highlands and maritime sand dunes of the Baltic Sea in Poland, were also included in this study and later found to be conspecific with G. rugosae. Phylogenetic placement analysis using environmental sequences indicated that G. mongioiense sp. nov. seems to be a rare species. Furthermore, the molecular and phylogenetic analysis provided important insights into the presence of highly divergent ribosomal variants in several Glomus species, with potential negative implication in phylogeny and species recognition. Full article

The saltmarsh plant Halimione portulacoides was shortly exposed to realistic levels of inorganic mercury (iHg) with the aim of investigating the adaptative processes of the roots and leaves regarding redox homeostasis, physiology, and Hg accumulation. Plants were collected at a contaminated (CONT) and a reference (REF) site to address the interference of contamination backgrounds. The influence of major abiotic variables (i.e., temperature and light) was also examined. Total Hg levels, antioxidant enzymes, lipid peroxidation (LPO), and photosynthetic activity were analyzed after 2 and 4 h of exposure. A poor accumulation of Hg in the roots was noticed, and no translocation to the stems and leaves was found, but plants from the CONT site seemed more prone to iHg uptake (in winter). Despite this, antioxidant modulation in the roots and leaves was found, disclosing, in winter, higher thresholds for the induction of enzymatic antioxidants in CONT leaves compared to REF plants, denoting that the former are better prepared to cope with iHg redox pressure. Consistently, CONT leaves exposed to iHg had remarkably lower LPO levels. Exposure did not impair photosynthetic activity, pinpointing H. portulacoides’ ability to cope with iHg toxicity under very-short-term exposure. Biochemical changes were noticed before enhancements in accumulation, reinforcing the relevance of these responses in precociously signaling iHg toxicity. Full article

The hypersaline soils of the Odiel Saltmarshes Natural Area are an extreme environment with high levels of some heavy metals; however, it is a relevant source of prokaryotic diversity that we aim to explore. In this study, six strains related to the halophilic genus Pseudidiomarina were isolated from this habitat. The phylogenetic study based on the 16S rRNA gene sequence and the fingerprinting analysis suggested that they constituted a single new species within the genus Pseudidiomarina. Comparative genomic analysis based on the OGRIs indices and the phylogeny inferred from the core genome were performed considering all the members of the family Idiomarinaceae. Additionally, a completed phenotypic characterization, as well as the fatty acid profile, were also carried out. Due to the characteristics of the habitat, genomic functions related to salinity and high heavy metal concentrations were studied, along with the global metabolism of the six isolates. Last, the ecological distribution of the isolates was studied in different hypersaline environments by genome recruitment. To sum up, the six strains constitute a new species within the genus Pseudidiomarina, for which the name Pseudidiomarina terrestris sp. nov. is proposed. The low abundance in all the studied hypersaline habitats indicates that it belongs to the rare biosphere in these habitats. In silico genome functional analysis suggests the presence of heavy metal transporters and pathways for nitrate reduction and nitrogen assimilation in low availability, among other metabolic traits. Full article

The genus Halomicroarcula, classified within the family Haloarculaceae, presently comprises eight haloarchaeal species isolated from diverse saline habitats, such as solar salterns, hypersaline soils, marine salt, and marine algae. Here, a detailed taxogenomic study and comparative genomic analysis of the genus Halomicroarcula was carried out. In addition, two strains, designated S1CR25-12^T and S3CR25-11^T, that were isolated from hypersaline soils located in the Odiel Saltmarshes in Huelva (Spain) were included in this study. The 16S rRNA and rpoB’ gene sequence analyses affiliated the two strains to the genus Halomicroarcula. Typically, the species of the genus Halomicroarcula possess multiple heterogeneous copies of the 16S rRNA gene, which can lead to misclassification of the taxa and overestimation of the prokaryotic diversity. In contrast, the application of overall genome relatedness indexes (OGRIs) augments the capacity for the precise taxonomic classification and categorization of prokaryotic organisms. The relatedness indexes of the two new isolates, particularly digital DNA–DNA hybridization (dDDH), orthologous average nucleotide identity (OrthoANI), and average amino acid identity (AAI), confirmed that strains S1CR25-12^T (= CECT 30620^T = CCM 9252^T) and S3CR25-11^T (= CECT 30621^T = CCM 9254^T) constitute two novel species of the genus Halomicroarcula. The names Halomicroarcula saliterrae sp. nov. and Halomicroarcula onubensis sp. nov. are proposed for S1CR25-12^T and S3CR25-11^T, respectively. Metagenomic fragment recruitment analysis, conducted using seven shotgun metagenomic datasets, revealed that the species belonging to the genus Halomicroarcula were predominantly recruited from hypersaline soils found in the Odiel Saltmarshes and the ponds of salterns with high salt concentrations. This reinforces the understanding of the extreme halophilic characteristics associated with the genus Halomicroarcula. Finally, comparing pan-genomes across the twenty Halomicroarcula and Haloarcula species allowed for the identification of commonalities and differences between the species of these two related genera. Full article

Seldom found in saltmarshes, Linum maritimum is a halophyte of great conservation interest in the eastern Iberian Peninsula. Although the species has been reported in different plant communities, there is no information on its range of salinity tolerance or mechanisms of response to environmental stress factors. In this study, L. maritimum plants were subjected to increasing salt concentrations in controlled conditions in a greenhouse. After six months of watering with salt solutions, only plants from the control, 50 mM and 100 mM NaCl treatment groups survived, but seeds were produced only in the first two. Significant differences were found between the plants from the various treatment groups in terms of their growth parameters, such as plant height, fresh weight, and the quantity of flowers and fruits. The main mechanism of salt tolerance is probably related to the species’ ability to activate K⁺ uptake and transport to shoots to partly counteract the accumulation of toxic Na⁺ ions. A biochemical analysis showed significant increases in glycine betaine, flavonoids and total phenolic compounds, highlighting the importance of osmotic regulation and antioxidant compounds in the salt tolerance of Linum maritimum. These findings have implications for the conservation of the species, especially under changing climatic conditions that may lead to increased soil salinity in its Mediterranean distribution area. Full article

Quantitatively characterizing coastal salt-marsh terrains and the corresponding spatiotemporal changes are crucial for formulating comprehensive management plans and clarifying the dynamic carbon evolution. Multiline light detection and ranging (LiDAR) exhibits great capability for terrain measuring for salt marshes with strong penetration performance and a new scanning mode. The prerequisite to obtaining the high-precision terrain requires accurate filtering of the salt-marsh vegetation points from the ground/mudflat ones in the multiline LiDAR data. In this study, a new alternative salt-marsh vegetation point-cloud filtering method is proposed for drone multiline LiDAR based on the extreme gradient boosting (i.e., XGBoost) model. According to the basic principle that vegetation and the ground exhibit different geometric and radiometric characteristics, the XGBoost is constructed to model the relationships of point categories with a series of selected basic geometric and radiometric metrics (i.e., distance, scan angle, elevation, normal vectors, and intensity), where absent instantaneous scan geometry (i.e., distance and scan angle) for each point is accurately estimated according to the scanning principles and point-cloud spatial distribution characteristics of drone multiline LiDAR. Based on the constructed model, the combination of the selected features can accurately and intelligently predict the category of each point. The proposed method is tested in a coastal salt marsh in Shanghai, China by a drone 16-line LiDAR system. The results demonstrate that the averaged AUC and G-mean values of the proposed method are 0.9111 and 0.9063, respectively. The proposed method exhibits enhanced applicability and versatility and outperforms the traditional and other machine-learning methods in different areas with varying topography and vegetation-growth status, which shows promising potential for point-cloud filtering and classification, particularly in extreme environments where the terrains, land covers, and point-cloud distributions are highly complicated. Full article

“Blue carbon”, apart from marine humus, includes the carbon (C) stock of coastal ecosystems such as mangroves, saltmarshes, and seagrass meadows, which have been overlooked until recently. Information about the role of coastal wetlands in C sequestration and providing other ecosystem services is still insufficient. In the present study, we assessed the C reserves of soils and vegetation biomass in two complex coastal landscapes (tombolos) located on the coasts of the White and Baltic seas. The soil and plant C stocks were slightly higher at the plot on the Baltic Sea (93.4 ± 46.7 Mg C·ha⁻¹ and 5.22 ± 2.51 Mg C·ha⁻¹, respectively) than at the plot on the White Sea (71.4 ± 38.2 Mg C·ha⁻¹ and 3.95 ± 2.42 Mg C·ha⁻¹, respectively). We attributed the higher values of the C reserved to a warmer climate and less saline water at the plot on the Baltic Sea. Both soil and plant C showed high heterogeneity due to geomorphological complexity and differences in vegetative communities. The Phragmites australis community showed the highest plant biomass and, in some places, high soil C reserves. Allochthonous C contributed to the soil C stock at the site on the White Sea. Though P. australis sequestered more C than other communities, its effect on ecosystem services was mostly negative because the invasion of reeds reduced the biological diversity of the marshes. Full article

Monitoring the negative impacts of trace metals is crucial to assess the health and stability of ecosystems. In salt marshes, halophyte plants were reported as possible bioaccumulators of these elements. The aim of this work was to explore the bioaccumulation potential of Bolboschoenus maritimus as a tool for monitoring the presence of metals in coastal environments. Bolboschoenus maritimus were collected from a brackish water lagoon, and the presence of the trace metals lead, cadmium, and nickel were seasonally evaluated in distinct parts of the plants, and in water and sediment samples. Lead was the trace metal with the highest concentration detected in water and sediments of the sampling site. The highest lead concentrations in B. maritimus were recorded in the spring season. The transport index indicated an accumulation of lead in the leaves of around 70% in the spring of 2009. Cadmium in leaves in spring and summer of 2009 reached values above 5 mg Cd. kg⁻¹. Nickel was not detected in most samples collected. Bolboschoenus maritimus was considered an adequate biomonitor for lead and cadmium, since it bioaccumulates both metals with seasonally distinct results, as the bioaccumulation factor results indicated. Full article

Saltmarsh is one of the most productive coastal habitats in the marine environment, and the macroinvertebrate community is crucial to its ecology and productivity. These productive ecosystems are currently under threat due to climate change and anthropogenic activities. However, macroinvertebrate communities and their functionality in saltmarsh from subtropical coastal areas have previously been largely ignored. In this study, we aimed to elucidate (i) the diversity and community assemblages, (ii) trophic structure, and (iii) changes of macroinvertebrate diversity under different seasons and climatic variables from a subtropical saltmarsh habitat. A total of 29 taxa in the eight (8) major groups were recorded in both seasons, with polychaetes being dominant (64%) in monsoon and crustaceans (50%) in post-monsoon. Among the trophic groups identified, surface deposit feeders and omnivores were dominant, accounting for 78.52% of the total groups. The highest value of diversity index (2.04) was observed at station S3 in monsoon and the lowest (1.408) at station S2 in post-monsoon. Strong seasonal variability was confirmed by two-way ANOVA and PERMANOVA, and SIMPER analysis identified that shrimp larvae (Macrobrachium sp.) were the taxa that contributed the most to grouping patterns between areas and seasons. In addition, non-metric multidimensional scaling (nMDS) revealed a great dissimilarity of macrobenthic faunal assemblages among the study stations and seasons. Spearman’s rank correlation analysis and canonical correspondence analysis (CCA) results revealed that the climatic factors water temperature, salinity, and alkalinity variation influenced the benthic community diversity. Full article

Coastal marine ecosystems worldwide are increasingly affected by tide alterations and anthropogenic disturbances affecting the water quality and leading to frequent algal blooms. Increased bloom persistence is a serious threat due to the long-lasting impacts on ecological processes and services, such as carbon cycling and sequestration. The exploration of eco-environmental feedback and algal bloom patterns remains challenging and poorly investigated, mostly due to the paucity of data and lack of model-free approaches to infer universal bloom dynamics. Florida Bay, taken as an epitome for biodiversity and blooms, has long experienced algal blooms in its central and western regions, and, in 2006, an unprecedented bloom occurred in the eastern habitats rich in corals and vulnerable habitats. With global aims, we analyze the occurrence of blooms in Florida Bay from three perspectives: (1) the spatial spreading networks of chlorophyll-a (CHLa) that pinpoint the source and unbalanced habitats; (2) the fluctuations of water quality factors pre- and post-bloom outbreaks to assess the environmental impacts of ecological imbalances and target the prevention and control of algal blooms; and (3) the topological co-evolution of biogeochemical and spreading networks to quantify ecosystem stability and the likelihood of ecological shifts toward endemic blooms in the long term. Here, we propose the transfer entropy (TE) difference to infer salient dynamical inter actions between the spatial areas and biogeochemical factors (ecosystem connectome) underpinning bloom emergence and spread as well as environmental effects. A Pareto principle, defining the top 20% of areal interactions, is found to identify bloom spreading and the salient eco-environmental interactions of CHLa associated with endemic and epidemic regimes. We quantify the spatial dynamics of algal blooms and, thus, obtain areas in critical need for ecological monitoring and potential bloom control. The results show that algal blooms are increasingly persistent over space with long-term negative effects on water quality factors, in particular, about how blooms affect temperature locally. A dichotomy is reported between spatial ecological corridors of spreading and biogeochemical networks as well as divergence from the optimal eco-organization: randomization of the former due to nutrient overload and temperature increase leads to scale-free CHLa spreading and extreme outbreaks a posteriori. Subsequently, the occurrence of blooms increases bloom persistence, turbidity and salinity with potentially strong ecological effects on highly biodiverse and vulnerable habitats, such as tidal flats, salt-marshes and mangroves. The probabilistic distribution of CHLa is found to be indicative of endemic and epidemic regimes, where the former sets the system to higher energy dissipation, larger instability and lower predictability. Algal blooms are important ecosystem regulators of nutrient cycles; however, chlorophyll-a outbreaks cause vast ecosystem impacts, such as aquatic species mortality and carbon flux alteration due to their effects on water turbidity, nutrient cycling (nitrogen and phosphorus in particular), salinity and temperature. Beyond compromising the local water quality, other socio-ecological services are also compromised at large scales, including carbon sequestration, which affects climate regulation from local to global environments. Yet, ecological assessment models, such as the one presented, inferring bloom regions and their stability to pinpoint risks, are in need of application in aquatic ecosystems, such as subtropical and tropical bays, to assess optimal preventive controls. Full article

Concerns regarding plastic pollution, especially microplastics, have increased, as they can be present in different environmental compartments, including estuarine areas and saltmarshes. Although saltmarshes are highly vulnerable to different human activities and pressures, they have the ability to trap/retain contaminants in their vegetated sediments. However, there is still little information regarding the role of saltmarshes in microplastic retention. Thus, the present study aims to investigate the capability of an estuarine saltmarsh to trap microplastics by comparing microplastic concentrations in vegetated (saltmarsh) and non-vegetated sediments. Microplastic content from sediment (vegetated and non-vegetated) samples collected at different sampling sites in Lima River estuary was estimated using previously optimised extraction protocols, and the observed particles were then characterised accordingly to their size, colour, shape, and polymer (by FTIR). Water samples were also collected and analysed for their microplastics content to complement MPs characterisation within the estuarine area. Microplastics were detected in all sediment samples, with fibres being the most common type of microplastic found, followed by fragments/particles. Overall, vegetated sediments, especially those of saltmarsh species Juncus maritimus, presented a higher number of plastic items. These results indicated that microplastics tend to be trapped in vegetated sediments, supporting the fact that saltmarshes have a significant influence on the transport, distribution, and accumulation of MPs in estuarine areas. Full article

Thirty-nine species of terebrantian Thysanoptera belonging to four families and 22 genera are here recorded from the Maltese Islands. Of these, 33 represent new records to this archipelago. Thrips were collected from 65 different locations over a seven-year period, covering the main habitat types found across the Maltese Islands, namely steppe, garigue, maquis and woodland, but also sand dunes and saltmarshes as well as roadsides, private and public gardens, greenhouses and cultivated fields. An illustrated dichotomous key to identify the Terebrantia of the Maltese Islands is presented. Chorological data for the species researched in the current study shows that the majority of these insects are of a European Mediterranean origin, though the geographical distribution of some of them extends to Africa and the Middle East. Seven species associated with agricultural commodities were found to be of alien origin; however they were locally found in small numbers and do not pose a threat to horticulture. Full article

Saltmarshes have the ability to not only promote biodiversity, but to put nations on the path towards climate recovery and net-zero emissions through saltmarshes’ capability to take up carbon. As the European Union’s (EU) Green Deal sets out to reach net-zero emissions by 2050, innovative solutions will need to be identified, possibly even through better preserving century-old habitats such as saltmarshes. Based on the upcoming needs from the EU, in the Spring of 2021, a workshop was held with leading Nordic saltmarsh and blue carbon scientists using the transdisciplinary methods of Systems Thinking and Bayesian Belief Networks to identify solutions that can include saltmarshes in future policy. These joint methods elicited multiple future scenarios in which data were collected on perceived notions of the value of saltmarshes and how to better govern them to ensure their longevity. The models developed in this study include human perceptions and comprehensive quantitative scenarios through their ability to define paths forward in the form of comprehensive policy recommendations. We found through scenario analysis that a major belief among the stakeholders was numerous events of change such as ‘outreach, getting salt marshes on the political agenda and forming new narratives would help to increase saltmarsh area via conservation and restoration prioritization’ would have a positive impact of saltmarshes in Nordic countries. Full article

Coastal reclamation by seawall embankments and the spread of invasive C₄ perennial grass Spartina alterniflora have recently become more prevalent in eastern China’s coastal wetlands. While trace metals (TMs), carbon, and nitrogen dynamics concerning reclamation have extensively been explored across China’s coastal wetlands, to date, the impact of reclamation by coastal embankment and exotic plant invasion on TMs’ pollution dynamics in coastal marshes remains largely unexplored. We compared TMs Cr, Cu, Pb, and Zn cumulation in coastal embankment-reclaimed versus unreclaimed S. alterniflora and Phragmites australis saltmarshes in eastern China coastal wetlands. In both S. alterniflora and P. australis marshes, coastal embankment reclamation spurred an increase in Cr, Cu, Pb, and Zn concentrations by 31.66%, 53.85%, 32.14%, 33.96% and by 59.18%, 87.50%, 55.55%, 36.84%, respectively, in both marsh types. Reclamation also reduced plant biomass, soil moisture, and soil salinity in both plants’ marshes. Our findings suggest that the impact of coastal embankment reclamation and replacement of native saltmarshes by invasive S. alterniflora had a synergistic effect on TM accumulation in the P. australis marshes, as corroborated by bioaccumulation and translocation factors. Reclamation by coastal embankments and invasive alien plants could significantly impair the physico-chemical properties of native plant saltmarsh and essentially weaken the accumulation of Cr, Cu, Pb, and Zn potential of the coastal saltmarshes. Our findings provide policymakers with an enhanced knowledge of the relationship between reclamation, plant invasiveness, and TM pollution dynamics in coastal wetlands, providing a baseline for attaining future goals and strategies related to the tradeoffs of various wetland reclamation types. Full article

The pulmonate gastropod genus Ellobium has its greatest diversity in the modern Indo-West Pacific Region (IWP). Its origin, however, is traced to the Early Oligocene of the Northeastern Atlantic and the Western Tethys Region. Two Ellobium species are documented from the Rupelian of France and Italy and a new species is recorded from the Chattian of Hungary: Ellobium kerwaensis nov. sp. The first records in the IWP are known from the Early Miocene, suggesting an eastward range expansion of the genus around the Oligocene/Miocene boundary, when Ellobium became extinct in the European seas. Extant Ellobium species are bound to habitats above the high tide line in salt marshes and mangroves. Comparable environmental requirements are expected for the fossil congeners. Ellobium may derive from Eocene ancestors, such as the Bartonian Eoellobium heberti from the Northeastern Atlantic. Eoellobium is introduced in this paper as a new genus. Full article