Extended Data Fig. 3: Whole-brain segmentation output generated with DELiVR. | Nature Methods

Extended Data Fig. 3: Whole-brain segmentation output generated with DELiVR.

From: Virtual reality-empowered deep-learning analysis of brain cells

Extended Data Fig. 3

a, 3D visualization of a whole raw light-sheet image stack. b, 3D view of whole-brain segmentation output of detected cells by DELiVR. The area-wise color code from the Allen Brain Atlas was combined with the 3D segmentation. Thereby each cell is color coded according to the brain area it was detected in. The segmentation of cells is shown in the original image space. Scale bar = 500 µm. c, Visualization of the detected cells in CCF3 atlas space using BrainRender (same image as in Fig. 2e). Scale bar = 1 mm.

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