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Least Squares Fitting of Data To A Curve

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Least Squares Fitting

of Data to a Curve
Gerald Recktenwald
Portland State University
Department of Mechanical Engineering
gerry@me.pdx.edu

These slides are a supplement to the book Numerical Methods with


Matlab: Implementations and Applications, by Gerald W. Recktenwald,
c 2001, Prentice-Hall, Upper Saddle River, NJ. These slides are  c
2001 Gerald W. Recktenwald. The PDF version of these slides may
be downloaded or stored or printed only for noncommercial, educational
use. The repackaging or sale of these slides in any form, without written
consent of the author, is prohibited.

The latest version of this PDF file, along with other supplemental material
for the book, can be found at www.prenhall.com/recktenwald.

Version 0.69 November 26, 2001


Overview

• Fitting a line to data


 Geometric interpretation
 Residuals of the overdetermined system
 The normal equations
• Nonlinear fits via coordinate transformation
• Fitting arbitrary linear combinations of basis functions
 Mathematical formulation
 Solution via normal equations
 Solution via QR factorization
• Polynomial curve fits with the built-in polyfit function
• Multivariate fitting

NMM: Least Squares Curve-Fitting page 1


Fitting a Line to Data

Given m pairs of data:

(xi, yi), i = 1, . . . , m

Find the coefficients α and β such that

F (x) = αx + β

is a good fit to the data

Questions:
• How do we define good fit?
• How do we compute α and β after a definition of “good fit”
is obtained?

NMM: Least Squares Curve-Fitting page 2


Plausible Fits

We can obtain plausible fits by adjusting the slope (α) and


intercept (β ). Here is a graphical representation of some
candidates for best fit to a particular set of data:

4
y
3

1
1 2 3 4 5 6
x

Which of these lines provides the best fit?

NMM: Least Squares Curve-Fitting page 3


The Residual

At each point the difference between the y data and the fit


function is

ri = yi − F (xi) = yi − (αxi + β)

ri is called the residual for the data pair (xi, yi).

ri is the vertical distance between the known data and the fit


function.

4
y
3

1
1 2 3 4 5 6
x

NMM: Least Squares Curve-Fitting page 4


Minimizing the Residual

Two criteria for choosing the “best” fit


  2
minimize |ri| or minimize ri

For statistical and computational reasons choose


 2
minimization of ρ = ri


m
2
ρ= [yi − (αxi + β)]
i=1

NMM: Least Squares Curve-Fitting page 5


Orthogonal Distance Fit

An alternative to minimizing the residual is to minimize the


orthogonal distance to the line.

d4
d3

d2
d1

x1 x2 x3 x4

 2
Minimizing di is known as the Orthogonal Distance
Regression problem. This problem readily solved with Matlab,
but it is beyond the scope of our present discussion1 .

1 See, e.g., Åke Björk, Numerical Methods for Least Squares Problems, 1996, SIAM,
Philadelphia

NMM: Least Squares Curve-Fitting page 6


Least Squares Fit (1)

The least squares fit is obtained by choosing the α and β so that


m
2
ri
i=1

is a minimum. Let ρ = r22 to simplify the notation.

Find α and β by minimizing ρ = ρ(α, β). The minimum


requires 
∂ρ 
=0
∂α  β=constant
and 
∂ρ 
=0
∂β  α=constant

NMM: Least Squares Curve-Fitting page 7


Least Squares Fit (2)

Carrying out the differentiation leads to

Sxxα + Sxβ = Sxy (1)


Sxα + mβ = Sy (2)

where

m 
m
Sxx = xixi Sx = xi
i=1 i=1
m m
Sxy = xiyi Sy = yi
i=1 i=1

Note: Sxx, Sx, Sxy , and Syy can be directly computed from
the given (xi, yi) data. Thus, Equation (1) and (2)
are two equations for the two unknowns, α and β .

NMM: Least Squares Curve-Fitting page 8


Least Squares Fit (3)

Solving equations (1) and (2) for α and β yields

1
α = (SxSy − mSxy ) (3)
d
1
β = (SxSxy − SxxSy ) (4)
d
with
2
d = Sx − mSxx (5)

NMM: Least Squares Curve-Fitting page 9


Overdetermined System for a Line Fit (1)

Now, let’s rederive the equations for the fit. This will give us
insight into the process or fitting arbitrary linear combinations of
functions.

For any two points we can write

αx1 + β = y1
αx2 + β = y2

or     
x1 1 α y1
=
x2 1 β y2

But why just pick two points?

NMM: Least Squares Curve-Fitting page 10


Overdetermined System for a Line Fit (2)

Writing out the αx + β = y equation for all of the known


points (xi, yi), i = 1, . . . , m gives the overdetermined system.
   
x1 1   y1
 x2 1 α  y2 
 . ...  β = 
 
 ..  ... 
xm 1 ym

or
Ac = y
where
   
x1 1   y1
 x2 1 α  y2 
A=
 ... ... 
 c= y= 
 ... 
β
xm 1 ym

Note: We cannot solve Ac = y with Gaussian elimination. Unless the


system is consistent (i.e., unless y lies in the column space of A)
it is impossible to find the c = (α, β)T that exactly satisfies all
m equations. The system is consistent only if all the data points
lie along a single line.

NMM: Least Squares Curve-Fitting page 11


Normal Equations for a Line Fit

Compute ρ = r22, where r = y − Ac


2 T T
ρ = r2 = r r = (y − Ac) (y − Ac)
T T T T T
= y y − (Ac) y − y (Ac) + c A Ac
T T T T
= y y − 2y Ac + c A Ac.

Minimizing ρ requires

∂ρ T T
= −2A y + 2A Ac = 0
∂c
or
T T
(A A)c = A b

This is the matrix formulation of equations (1) and (2).

NMM: Least Squares Curve-Fitting page 12


linefit.m

The linefit function fits a line to a set of data by solving the


normal equations.

function [c,R2] = linefit(x,y)


% linefit Least-squares fit of data to y = c(1)*x + c(2)
%
% Synopsis: c = linefit(x,y)
% [c,R2] = linefit(x,y)
%
% Input: x,y = vectors of independent and dependent variables
%
% Output: c = vector of slope, c(1), and intercept, c(2) of least sq. line fit
% R2 = (optional) coefficient of determination; 0 <= R2 <= 1
% R2 close to 1 indicates a strong relationship between y and x
if length(y)~= length(x), error(’x and y are not compatible’); end

x = x(:); y = y(:); % Make sure that x and y are column vectors


A = [x ones(size(x))]; % m-by-n matrix of overdetermined system
c = (A’*A)\(A’*y); % Solve normal equations
if nargout>1
r = y - A*c;
R2 = 1 - (norm(r)/norm(y-mean(y)))^2;
end

NMM: Least Squares Curve-Fitting page 13


Line Fitting Example

Store data and perform the fit

>> x = [1 2 4 5];
>> y = [1 2 2 3];
>> c = linefit(x,y)

Evaluate and plot the fit with

>> xfit = linspace(min(x),max(x));


>> yfit = c(1)*xfit + c(2)
>> plot(x,y,’o’,xfit,yfit,’-’);

4
y data and fit function

0
0 1 2 3 4 5 6
x

NMM: Least Squares Curve-Fitting page 14


R2 Statistic (1)

R2 is a measure of how well the fit function follows the trend in


the data.

Define:
ŷ is the value of the fit function at the
known data points
ŷi = c1xi + c2 for a line fit
ȳ is the average of the y values
1 
ȳ = yi
m
Then:
 2
2
(ŷi − ȳ)
r22
R = =1−
(yi − ȳ)
2 (yi − ȳ)2

0 ≤ R 2 ≤ 1.

When R2 ≈ 1 the fit function follows the trend of the data.


When R2 ≈ 0 the fit is not significantly better than
approximating the data by its mean.

NMM: Least Squares Curve-Fitting page 15


R2 Statistic (2)

Graphical interpretation of

2 r22
R =1−
(yi − ȳ)2

Consider a line fit to a data set with R2 = 0.934


5
Vertical distances between
4
given y data and the least y
squares line fit. Vertical lines 3

show contributions to r2 . 2

1
1 2 3 4 5 6
x

5
Vertical distances between
4
given y data and the average y
of the y . Vertical lines show 3

contributions to (yi −ȳ)2 2

1
1 2 3 4 5 6
x

NMM: Least Squares Curve-Fitting page 16


R2 Statistic: Example Calculation

Consider the variation of the bulk modulus of Silicon Carbide as


a function of temperature (Cf. Example 9.4)

T (◦ C) 20 500 1000 1200 1400 1500


G (GP a) 203 197 191 188 186 184

>> [t,D,labels] = loadColData(’SiC.dat’,6,5);


>> g = D(:,1);
>> [c,R2] = linefit(t,g);
c =
-0.0126
203.3319
R2 =
0.9985

205
GPa

200
Bulk Modulus

195

190

185

180
0 500 1000 1500
°
T C

NMM: Least Squares Curve-Fitting page 17


Fitting Transformed Non-linear Functions (1)

• Some nonlinear fit functions y = F (x) can be transformed


to an equation of the form v = αu + β
• Linear least squares fit to a line is performed on the
transformed variables.
• Parameters of the nonlinear fit function are obtained by
transforming back to the original variables.
• The linear least squares fit to the transformed equations does
not yield the same fit coefficients as a direct solution to the
nonlinear least squares problem involving the original fit
function.

Examples:
y = c1ec2x −→ ln y = αx + β
y = c1xc2 −→ ln y = α ln x + β
y = c1xec2x −→ ln(y/x) = αx + β

NMM: Least Squares Curve-Fitting page 18


Fitting Transformed Non-linear Functions (2)

Consider
c x
y = c1e 2 (6)
Taking the logarithm of both sides yields

ln y = ln c1 + c2x

Introducing the variables

v = ln y b = ln c1 a = c2

transforms equation (6) to

v = ax + b

NMM: Least Squares Curve-Fitting page 19


Fitting Transformed Non-linear Functions (3)

The preceding steps are equivalent to graphically obtaining c1


and c2 by plotting the data on semi-log paper.

y = c1ec2x ln y = c2x + ln c1
1
5 10

4.5

3.5
0
10

2.5
y

2
-1
10
1.5

0.5

-2
0 10
0 0.2 0.4 0.6 0.8 1 1.2 1.4 1.6 1.8 2 0 0.2 0.4 0.6 0.8 1 1.2 1.4 1.6 1.8 2
x x

NMM: Least Squares Curve-Fitting page 20


Fitting Transformed Non-linear Functions (4)

Consider
c
y = c1x 2 (7)
Taking the logarithm of both sides yields

ln y = ln c1 + c2 ln x

Introduce the transformed variables

v = ln y u = ln x b = ln c1 a = c2

and equation (7) can be written

v = au + b

NMM: Least Squares Curve-Fitting page 21


Fitting Transformed Non-linear Functions (5)

The preceding steps are equivalent to graphically obtaining c1


and c2 by plotting the data on log-log paper.

y = c1xc2 ln y = c2 ln x + ln c1
1
5 10

4.5

3.5

0
2.5 y 10
y

1.5

0.5

-1
0 10
-2 -1 0 1
0 1 2 3 4 5 6 10 10 10 10
x x

NMM: Least Squares Curve-Fitting page 22


Example: Fitting Data to y = c1xec2x

Consider
c2 x
y = c1xe (8)
The transformation

y
v = ln a = c2 b = ln c1
x

results in the linear equation

v = ax + b

y = c1xec2x ln(y/x) = c2x + ln c1


0.5 1

0.45 0

0.4 -1

0.35 -2

0.3 -3
ln(y/x)

0.25 -4
y

0.2 -5

0.15 -6

0.1 -7

0.05 -8

0 -9
0 1 2 3 4 5 6 0 1 2 3 4 5 6
x x

NMM: Least Squares Curve-Fitting page 23


xexpfit.m

function c = xexpfit(x,y)
% xexpfit Least squares fit of data to y = c(1)*x*exp(c(2)*x)
%
% Synopsis: c = xexpfit(x,y)
%
% Input: x,y = vectors of independent and dependent variable values
%
% Output: c = vector of coefficients of y = c(1)*x*exp(c(2)*x)

z = log(y./x); % Natural log of element-by-element division


c = linefit(x,z); % Fit is performed by linefit
c = [exp(c(2)); c(1); ]; % Extract parameters from transformation

NMM: Least Squares Curve-Fitting page 24


Example: Fit Synthetic Data

Generate synthetic data with y = 5xe−3x. See demoXexp

>> x0 = 0.01; % Starting point ~= 0 avoids log(0)


>> noise = 0.05; % Magnitude of noise
>> x = linspace(x0,2,n);
>> y = 5*x.*exp(-3*x); % Original data
>> yn = y + noise*(rand(size(x))-0.5); % Add noise
>> yn = abs(yn); % Need positive y for log(y)
>> c = xexpfit(x,yn);

0.7
original
noisy
0.6 fit

0.5

c1 = 5.770 c2 = -3.233
0.4
200 points in synthetic data set
y

0.3

0.2

0.1

0
0 0.5 1 1.5 2
x

NMM: Least Squares Curve-Fitting page 25


Summary of Transformations

• Transform (x, y) data as needed


• Use linefit
• Transform results of linefit back

>> x = ... % original data


>> y = ...
>> u = ... % transform the data
>> v = ...
>> a = linefit(u,v)
>> c = ... % transform the coefficients

NMM: Least Squares Curve-Fitting page 26


Summary of Line Fitting

1. m data pairs are given: (xi, yi), i = 1, . . . , m.


2. The fit function y = F (x) = c1x + c2 has n = 2 basis
functions f1(x) = x and f2(x) = 1.
3. Evaluating the fit function for each of the m data points
gives an overdetermined system of equations Ac = y where
c = [c1, c2]T , y = [y1, y2, . . . , ym]T , and
   
f1(x1) f2(x1) x1 1
 f1(x2) f2(x2)   x2 1
A=
 ... 
...  =  .
 .. ... 
.
f1(xm) f2(xm) xm 1

4. The least-squares principle defines the best fit as the values


of c1 and c2 that minimize
2 2
ρ(c1, c2) = y − F (x)2 = y − Ac2.

5. Minimizing of ρ(c1, c2) leads to the normal equations


T T
(A A)c = A y,

6. Solving the normal equations gives the slope c1 and intercept


c2 of the best fit line.

NMM: Least Squares Curve-Fitting page 27


Fitting Linear Combinations of Functions

• Definition of fit function and basis functions


• Formulation of the overdetermined system
• Solution via normal equations: fitnorm
• Solution via QR factorization: fitqr and \

NMM: Least Squares Curve-Fitting page 28


Fitting Linear Combinations of Functions (1)

Consider the fitting function

F (x) = cf1(x) + c2f2(x) + . . . + cnfk (x)

or

n
F (x) = cj fj (x)
j=1
The basis functions

f1(x), f2(x), . . . , fn(x)

are chosen by you — the person making the fit.

The coefficients
c1, c2, . . . , cn
are determined by the least squares method

NMM: Least Squares Curve-Fitting page 29


Fitting Linear Combinations of Functions (2)

F (x) function can be any combination of functions that are


linear in the cj . Thus

2 2/3 x 4x
1, x, x , x , sin x, e , xe , cos(ln 25x)

are all valid basis functions. On the other hand,


c3 x c2
sin(c1x), e , x

are not valid basis functions as long as the cj are the parameters
of the fit.

The fit function for a cubic polynomial is


3 2
F (x) = c1x + c2x + c3x + c4,

which has the basis functions


3 2
x , x , x, 1.

NMM: Least Squares Curve-Fitting page 30


Fitting Linear Combinations of Functions (3)

The objective is to find the cj such that F (xi) ≈ yi.

Since F (xi)
= yi, the residual for each data point is


n
ri = yi − F (xi) = yi − cj fj (xi)
j=1
The least-squares solution gives the cj that minimize r2.

NMM: Least Squares Curve-Fitting page 31


Fitting Linear Combinations of Functions (4)

Consider the fit function with three basis functions

y = F (x) = c1f1(x) + c2f2(x) + c3f3(x).

Assume that F (x) acts like an interpolant. Then

c1f1(x1) + c2f2(x1) + c3f3(x1) = y1,


c1f1(x2) + c2f2(x2) + c3f3(x2) = y2,
...

c1f1(xm) + c2f2(xm) + c3f3(xm) = ym.

are all satisfied.

NMM: Least Squares Curve-Fitting page 32


Fitting Linear Combinations of Functions (5)

The preceding equations are equivalent to the overdetermined


system
Ac = y,
where  
f1(x1) f2(x1) f3(x1)
 f1(x2) f2(x2) f3(x2) 
A=
 ... ... ... 
,
f1(xm) f2(xm) f3(xm)
 
  y1
c1  y2 
c =  c2 , y= 
 ...  .
c3
ym

NMM: Least Squares Curve-Fitting page 33


Fitting Linear Combinations of Functions (6)

If F (x) cannot interpolate the data, then the preceding matrix


equation cannot be solved exactly: b does not lie in the column
space of A.

The least-squares method provides the compromise solution that


minimizes r2 = y − Ac2.

The c that minimizes r2 satisfies the normal equations


T T
(A A)c = A y.

NMM: Least Squares Curve-Fitting page 34


Fitting Linear Combinations of Functions (7)

In general, for n basis functions


 
f1(x1) f2(x1) ... fn(x1)
 f1(x2) f2(x2) ... fn(x2) 
A=
 ... ... ... ,

f1(xm) f2(xm) ... fn(xm)

  
c1 y1
 c2   y2 
c= 
 ...  , y= 
 ...  .
cn ym

NMM: Least Squares Curve-Fitting page 35


Example: Fit a Parabola to Five Points

Consider fitting a curve to the following data.

x 1 2 3 4 5 6
y 10 5.49 0.89 −0.14 −1.07 0.84

12

10

6
y

−2
0 1 2 3 4 5 6 7
x

Not knowing anything more about the data we can start by


fitting a polynomial to the data.

NMM: Least Squares Curve-Fitting page 36


Example: Fit a Parabola to Six Points (1)

The equation of a second order polynomial can be written


2
y = c1x + c2x + c3

where the ci are the coefficients to be determined by the fit and


the basis functions are
2
f1(x) = x , f2(x) = x, f3(x) = 1

The A matrix is
 
x21 x1 1
 x2 x2 1
A=
 ..
.
2
... ... 

x2m xm 1

where, for this data set, m = 6.

NMM: Least Squares Curve-Fitting page 37


Example: Fit a Parabola to Six Points (2)

Define the data

>> x = (1:6)’;
>> y = [10 5.49 0.89 -0.14 -1.07 0.84]’;

Notice the transposes, x and y must be column vectors.

The coefficient matrix of the overdetermined system is

>> A = [ x.^2 x ones(size(x)) ];

The matrix and right-hand-side vector for the normal equations


are

>> disp(A’*A)
2275 441 91
441 91 21
91 21 6

>> disp(A’*y)
A’*y =
41.2200
22.7800
16.0100

NMM: Least Squares Curve-Fitting page 38


Example: Fit a Parabola to Six Points (3)

Solve the normal equations

>> c = (A’*A)\(A’*y)
c =
0.8354
-7.7478
17.1160

Evaluate and plot the fit

>> xfit = linspace(min(x),max(x));


>> yfit = c(1)*xfit.^2 + c(2)*xfit + c(3);
>> plot(x,y,’o’,xfit,yfit,’--’);

F(x) = c1 x2 + c2 x + c3
12

10

6
y

−2
0 1 2 3 4 5 6 7
x

NMM: Least Squares Curve-Fitting page 39


Example: Alternate Fit to Same Six Points (1)

Fit the same points to


c1
F (x) = + c2x
x
The basis functions are
1
, x
x
In Matlab:

>> x = (1:6)’;
>> y = [10 5.49 0.89 -0.14 -1.07 0.84]’;
>> A = [1./x x];
>> c = (A’*A)\(A’*y)

F(x) = c1/x + c2 x
12

10

6
y

−2
0 1 2 3 4 5 6 7
x

NMM: Least Squares Curve-Fitting page 40


Evaluating the Fit Function
as a Matrix–Vector Product (1)

We have been writing the fit function as

y = F (x) = c1f1(x) + c2f2(x) + · · · + cnfn(x)

The overdetermined coefficient matrix contains the basis


functions evaluated at the known data
 
f1(x1) f2(x1) . . . fn(x1)
 f1(x2) f2(x2) . . . fn(x2) 
A=  ... ... ... 

f1(xm) f2(xm) . . . fn(xm)

Thus, if A is available

F (x) = Ac

evaluates F (x) at all values of x, i.e., F (x) is a vector-valued


function.

NMM: Least Squares Curve-Fitting page 41


Evaluating the Fit Function
as a Matrix–Vector Product (2)

Evaluating the fit function as a matrix–vector product can be


performed for any x. Suppose then that we have created an
m-file function that evaluates A for any x, for example

function A = xinvxfun(x)
A = [ 1./x(:) x(:) ];

We evaluate the fit coefficients with

>> x = ..., y = ...


>> c = fitnorm(x,y,’xinvxfun’);

Then, to plot the fit function after the coefficients of the fit

>> xfit = linspace(min(x),max(x));


>> Afit = xinvxfun(xfit);
>> yfit = Afit*c;
>> plot(x,y,’o’,xfit,yfit,’--’)

NMM: Least Squares Curve-Fitting page 42


Evaluating the Fit Function
as a Matrix–Vector Product (3)

Advantages:

• The basis functions are defined in only one place: in the


routine for evaluating the overdetermined matrix.
• Automation of fitting and plotting is easier because all that is
needed is one routine for evaluating the basis functions.
• End-user of the fit (not the person performing the fit) can
still evaluate the fit function as
y = c1f1(x) + c2f2(x) + · · · + cnfn(x).

Disadvantages:

• Storage of matrix A for large x vectors consumes memory.


This should not be a problem for small n.
• Evaluation of the fit function may not be obvious to a reader
unfamiliar with linear algebra.

NMM: Least Squares Curve-Fitting page 43


Matlab Implementation in fitnorm

Let A be the m × n matrix defined by



... ... ... 
A =  f1(x) f2(x) ... fn(x)
... ... ...

The columns of A are the basis functions evaluated at each of


the x data points.

As before, the normal equations are


T T
A Ac = A y

The user supplies a (usually small) m-file that returns A.

NMM: Least Squares Curve-Fitting page 44


fitnorm.m

function [c,R2,rout] = fitnorm(x,y,basefun)


% fitnorm Least-squares fit via solution to the normal equations
% Given ordered pairs of data, (x_i,y_i), i=1,...,m, fitnorm
% returns the vector of coefficients, c_1,...,c_n, such that
% F(x) = c_1*f_1(x) + c_2*f_2(x) + ... + c_n*f_n(x)
% minimizes the L2 norm of y_i - F(x_i).
%
% Synopsis: c = fitnorm(x,y,basefun)
% [c,R2] = fitnorm(x,y,basefun)
% [c,R2,r] = fitnorm(x,y,basefun)
%
% Input: x,y = vectors of data to be fit
% basefun = (string) name of user-supplied m-file that computes
% matrix A. The columns of A are the values of the
% basis functions evaluated at the x data points.
%
% Output: c = vector of coefficients obtained from the fit
% R2 = (optional) adjusted coefficient of determination; 0 <= R2 <= 1
% R2 close to 1 indicates a strong relationship between y and x
% r = (optional) residuals of the fit

if length(y)~= length(x); error(’x and y are not compatible’); end

A = feval(basefun,x(:)); % Coefficient matrix of overdetermined system


c = (A’*A)\(A’*y(:)); % Solve normal equations, y(:) is always a column
if nargout>1
r = y - A*c; % Residuals at data points used to obtain the fit
[m,n] = size(A);
R2 = 1 - (m-1)/(m-n-1)*(norm(r)/norm(y-mean(y)))^2;
if nargout>2, rout = r; end
end

NMM: Least Squares Curve-Fitting page 45


Example of User-Supplied m-files

The basis functions for fitting a parabola are


2
f1(x) = x , f2(x) = x, f3(x) = 1

Create the m-file poly2Basis.m:

function A = poly2Basis(x)
A = [ x(:).^2 x(:) ones(size(x(:)) ];

then at the command prompt

>> x = ...; y = ...;


>> c = fitnorm(x,y,’poly2Basis’)

or use an in-line function object:

>> x = ...; y = ...;


>> Afun = inline(’[ x(:).^2 x(:) ones(size(x(:)) ]’);
>> c = fitnorm(x,y,Afun);

NMM: Least Squares Curve-Fitting page 46


Example of User-Supplied m-files

To the basis functions for fitting F (x) = c1/x + c2x are

1
, x
x
Create the m-file xinvxfun.m

function A = xinvxfun(x)
A = [ 1./x(:) x(:) ];

then at the command prompt

>> x = ...; y = ...;


>> c = fitnorm(x,y,’xinvxfun’)

or use an in-line function object:

>> x = ...; y = ...;


>> Afun = inline(’[ 1./x(:) x(:) ]’);
>> c = fitnorm(x,y,Afun);

NMM: Least Squares Curve-Fitting page 47


R2 Statistic

R2 can be applied to linear combinations of basis functions.

Recall that for a line fit (Cf. § 9.1.4.)


 2
2
(ŷ i − ȳ) r22
R = =1−
(yi − ȳ)
2 (yi − ȳ)2

where ŷi is the value of the fit function evaluated at xi, and ȳ is


the average of the (known) y values.

For a linear combination of basis functions



n
ŷi = cj fj (xi)
j=1

To account for the reduction in degrees of freedom in the data


when the fit is performed, it is technically appropriate to consider
the adjusted coefficient of determination

2 m − 1 (yi − ŷ)2
Radjusted = 1 −  ,
m−n−1 (yi − ȳ)2
2
fitnorm provides the option of computing Radjusted

NMM: Least Squares Curve-Fitting page 48


Polynomial Curve Fits with polyfit (1)

Built-in commands for polynomial curve fits:

polyfit Obtain coefficients of a least squares curve fit


of a polynomial to a given data set
polyval Evaluate a polynomial at a given set of x
values.

Syntax:
c = polyfit(x,y,n)
[c,S] = polyfit(x,y,n)

x and y define the data


n is the desired degree of the polynomial.

c is a vector of polynomial coefficients stored in order of


descending powers of x
n n−1
p(x) = c1x + c2x + · · · + cnx + cn+1

S is an optional return argument for polyfit. S is used as input


to polyval

NMM: Least Squares Curve-Fitting page 49


Polynomial Curve Fits with polyfit (2)

Evaluate the polynomial with polyval

Syntax:
yf = polyval(c,xf)
[yf,dy] = polyval(c,xf,S)

c contains the coefficients of the polynomial (returned by


polyfit)

xf is a scalar or vector of x values at which the polynomial is to


be evaluated

yf is a scalar or vector of values of the polynomials: yf= p(xf).

If S is given as an optional input to polyval, then dy is a vector


of estimates of the uncertainty in yf

NMM: Least Squares Curve-Fitting page 50


Example: Polynomial Curve Fit (1)

Fit a polynomial to Consider fitting a curve to the following data.

x 1 2 3 4 5 6
y 10 5.49 0.89 −0.14 −1.07 0.84

In Matlab:
>> x = (1:6)’;
>> y = [10 5.49 0.89 -0.14 -1.07 0.84]’;
>> c = polyfit(x,y,3);
>> xfit = linspace(min(x),max(x));
>> yfit = polyval(c,xfit);
>> plot(x,y,’o’,xfit,yfit,’--’)

12

10

−2
1 2 3 4 5 6

NMM: Least Squares Curve-Fitting page 51


Example: Conductivity of Copper Near 0 K

35

30

25
Conductivity (W/m/C)

20

15

10

0
0 10 20 30 40 50 60
Temperature (K)

NMM: Least Squares Curve-Fitting page 52


Example: Conductivity of Copper Near 0 K (2)

Theoretical model of conductivity is

1
k(T ) = c1 2
+ c2T
T
To fit using linear least squares we need to write this as

1 c1 2
γ(T ) = = + c2T
k(T ) T

which has the basis functions


1 2
, T
T
The m-file implementing these basis functions is
function y = cuconBasis1(x)
% cuconBasis1 Basis fcns for conductivity model: 1/k = c1/T + c2*T^2
y = [1./x x.^2];

An m-file that uses fitnorm to fit the conductivity data with the


cuconBasis1 function is listed on the next page.

NMM: Least Squares Curve-Fitting page 53

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