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    Shannon Diversity Index

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    linubinoy
    The Shannon-Wiener diversity index is a measure of diversity that combines species richness and equitability. It is calculated using the proportion of each species in a sample and the natural log of those proportions. Higher values indicate more even distribution among species while lower values mean domination by one or a few species. The document provides an example calculation and communities with different diversity levels to illustrate the index. It concludes by describing an experiment where a student would measure diversity in two 1m2 plots using species counts or coverage proportions.

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    Shannon Diversity Index

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    linubinoy
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    The Shannon-Wiener diversity index is a measure of diversity that combines species richness and equitability. It is calculated using the proportion of each species in a sample and the natural log of those proportions. Higher values indicate more even distribution among species while lower values mean domination by one or a few species. The document provides an example calculation and communities with different diversity levels to illustrate the index. It concludes by describing an experiment where a student would measure diversity in two 1m2 plots using species counts or coverage proportions.

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    The Shannon-Wiener diversity index is a measure of diversity that combines species richness and equitability. It is calculated using the proportion of each species in a sample and the natural log of those proportions. Higher values indicate more even distribution among species while lower values mean domination by one or a few species. The document provides an example calculation and communities with different diversity levels to illustrate the index. It concludes by describing an experiment where a student would measure diversity in two 1m2 plots using species counts or coverage proportions.

    Copyright:

    Attribution Non-Commercial (BY-NC)
    Download as DOC, PDF, TXT or read online from Scribd
    Download as doc, pdf, or txt
    218 views2 pages

    Shannon Diversity Index

    Uploaded by

    linubinoy
    The Shannon-Wiener diversity index is a measure of diversity that combines species richness and equitability. It is calculated using the proportion of each species in a sample and the natural log of those proportions. Higher values indicate more even distribution among species while lower values mean domination by one or a few species. The document provides an example calculation and communities with different diversity levels to illustrate the index. It concludes by describing an experiment where a student would measure diversity in two 1m2 plots using species counts or coverage proportions.

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    SHANNON-WIENER DIVERSITY INDEX

    Background: Measuring diversity has been of historical significance and due to the obvious declines in habitat diversity this data is still valuable. The Shannon-Wiener diversity index is one measure that we will use to try to draw information from samples in the field. Historically, the index has been used to measure the effects of habitat quality such as effects of pollution effluents. Recently, this index has fallen out of favor because it doesnt take into account habitat specific parameters required by specific species. Newer indices have incorporated such parameters and are termed, appropriately enough, Habitat Suitability Indices (HSI). Though the results of the Shannon-Wiener index needs to be used with caution, it still provides a good learning tool for comparing two distinct habitats. It combines two quantifiable measures: the species richness (# species within the community) and species equitability (how even are the numbers of individual species). For example, if we have a sample of 100 fish containing only 2 species, this sample is equitable if there are 50 of each species. Conversely, if there were 99 of 1 species and 1 of the other, there would be no equability. In this second example, if we were to sample 1 individual, it likely would be of the first species. If the community was equitable (first example), wed have a 50/50 chance of sampling the first species. Sample Calculations: The Shannon-Wiener Diversity Index, H, is calculated using the following equation: H = - Pi(lnPi) where Pi is the proportion of each species in the sample.

    Species 1 2 3 4 5 Total

    # found 84 4 91 34 43 256

    Pi 0.3281 0.0156 0.3555 0.1328 0.1680 1.0000

    ln(Pi) -1.1144 -4.1589 -1.0343 -2.0188 -1.7840

    Pi ln(Pi) -.03656 -0.0650 -0.3677 -0.2681 -0.2997 -1.3661

    In the example above H = 1.3661 Given a very large sample size, with more than 5 species, the S-W index values (H) can range of 0 to ~4.6 using the natural log (ln). A value near 0 would indicate that every species in the sample is the same. A value near 4.6 would indicate that the number of individuals are evenly distributed between all the species. Values in the middle are ambiguous which is an obvious flaw of this index and, thus, care should be taken when using this index. For the AP Exam you should be able to calculate the Shannon-Wiener Index for a given sample. Complete the tables for the following populations and make a conclusion about the diversity for each community.

    Community #1

    Species 1 2 3 4 5 Total
    Community #2

    # found 40 40 40 40 40

    Pi

    ln(Pi)

    Pi ln(Pi)

    Species 1 2 3 4 5 Total
    Community #3

    # found 1 1 196 1 1

    Pi

    ln(Pi)

    Pi ln(Pi)

    Species 1 2 3 4 5 Total

    # found 0 200 0 0 0

    Pi

    ln(Pi)

    Pi ln(Pi)

    Your experiment: Find an area within the same general ecosystem (e.g., chaparral) and basically many of the same plants (at least 5 species) in which you can examine 2 separate. Mark off two 1 m x 1 m areas that are separated by some distance. One might be closer to a stream than the other, for example. First identify as many different species of plants (including weeds) that you can. You neednt name them, although that would be nice, but assign each a number (if you have a camera, photograph a sample of each species). Now you need to count your species. You have 2 options: either count the number of individuals of each species, or, CAREFULLY, measure the proportion of your 1 m 2 area that is occupied by each species. Make 2 data tables, one for each area, and complete as shown in the examples above. In addition, record any observations about the two different areas (slope, proximity to water, sunlight, etc.). Conclusion: After completing your tables, determine which area showed the greatest diversity, and why. What would you do differently next time, how valid was your data and conclusions, and anything else of importance.

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