Translation
Translation
Translation
Protein Synthesis
OVERVIEW
Genetic information in chromosomes
transmitted to daughter cells (DNA
replication)
- expressed to RNA (transcription)
- protein synthesis (translation).
Protein Synthesis
Protein Synthesis
THE GENETIC CODE
Dictionary identify the
correspondence between a
seq of nucleotide bases & seq
of a.a.
Each individual word in the
code composed of 3
nucleotide bases = codon
Protein Synthesis
Codons
-presented in mRNA language of A, G, C, U
-written from 5 to 3-end
-used to produced three-base codons
-64 combinations of bases
-code for 20 common a.a.
Protein Synthesis
How to translate a codon?
Table
Termination (stop or nonsense) codons
UAG, UGA, UAA
Protein Synthesis
Protein Synthesis
Characteristics of the genetic code
1. Specificity
-specific, particular codon always codes the same a.a.
2. Universality
-conserved
3. Degeneracy
-degenerate/redundant (a given a.a. may have more than
1 triplet coding for it. i.e Arg by 6 different codons
4. Nonoverlapping & commaless
-code is read from fixed starting point as continuous seq
of bases, taken 3 at a time
Protein Synthesis
Consequences of altering the nucleotide sequence
Silent mutation
Missense mutation
Nonsense mutation
Other mutations
Trinucleotide repeat expansion
Splice site mutations
Frame-shift mutations
Protein Synthesis
Protein Synthesis
Protein Synthesis
Protein Synthesis
COMPONENTS REQUIRED FOR TRANSLATION
1. Amino acids
2. Transfer RNA
3. Aminoacyl-tRNA
4. Messenger RNA
5. Functionally competent ribosomes
6. Protein factors
7. ATP & GTP
Protein Synthesis
COMPONENTS REQUIRED FOR TRANSLATION
1. Amino acids
Protein Synthesis
COMPONENTS REQUIRED FOR TRANSLATION
2. tRNA (carry specific a.a. & to recognize the codon for that
a.a. / adaptor molecules)
-1 specific type of tRNA is req per a.a.
-Amino acid attachment site
attachment site for specific a.a at 3
-Anticodon
3-base nucleotide seq. that
recognizes specific codon on
mRNA
Protein Synthesis
Protein Synthesis
COMPONENTS REQUIRED FOR TRANSLATION
3. Aminoacyl-tRNA synthetases
enz req for attachment of a.a. to their corresponding
tRNA
Protein Synthesis
COMPONENTS REQUIRED FOR
TRANSLATION
Catalyzes the esterification of a
specific a. a. or its precursor to one of
all its compatible cognate tRNAs to
form an aminoacyl-tRNA
Protein Synthesis
COMPONENTS REQUIRED FOR TRANSLATION
4. mRNA
specific mRNA req as template for polypeptide
synthesis
Protein Synthesis
COMPONENTS REQUIRED FOR TRANSLATION
5. Functionally competent ribosomes
ribosomes = protein + ribosomal RNA complexes
2 subunits = large & small
large catalyzes formation of peptide bonds
small binds mRNA
Protein Synthesis
COMPONENTS REQUIRED FOR
TRANSLATION
3 sites:
A site = point of entry for the
aminoacyl tRNA
P site = where the peptidyl tRNA is
formed in the ribosome
E site = the exit site of uncharged
tRNA after it gives its
amino acid to the
growing peptide chain
Protein Synthesis
COMPONENTS REQUIRED FOR TRANSLATION
6. Protein factors
Initiation, Elongation & Termination factors
7. ATP & GTP
sources of energy
Protein Synthesis
STEPS IN PROTEIN SYNTHESIS
Translation
Initiation
Elongation
Termination
Polypeptide chains produced may be modified by
posttranslational modification
Protein Synthesis
1. Initiation
2 ribosomal subunits
mRNA,
aminoacyl-tRNA,
GTP / ATP,
Initiation factors
Prokaryotes IFs : IF-1, IF-2, IF-3
Protein Synthesis
1. Initiation
2 mechanisms ribosome recognizes nucleotide:
i) Shine-Dalgarno seq. : E. coli, 6-10 bases upstream
AUG
Euk: 40S ribosomal subunit binds to cap structure at
5 end of mRNA & moves until AUG
ii) Initiation codon AUG recognized by initiator tRNA
Euk : not formylated
Protein Synthesis
1. Initiation
1st aminoacyl tRNA (fMet-tRNA)
Protein Synthesis
1. Initiation
Protein Synthesis
Initiation
Inhibitors of translation
Protein Synthesis
2. Elongation
Elongation Factors
EF-Tu, EF-Ts
EF-1 , EF-1
Translocation
EF-G
EF-2
Protein Synthesis
2. Elongation
Addition of a.a. to carboxyl end of growing chain
Protein Synthesis
Protein Synthesis
3. Termination
When 1 of 3 termination codons moves into A site
Release Factors
RF-1 : UAA, UAG ; RF-2 : UGA, UAA ; RF-3 : release
RF-1 & RF-2
eRF : recognizes all termination codons ; eRF-3
Protein Synthesis
3. Termination
Protein Synthesis
Polysomes
> 1 ribosome at a time can generally translate a message
Complex of 1 mRNA + a number of ribosomes = polysome /
polyribosome
Protein Synthesis
Protein Synthesis
Protein Synthesis