Collection and Storage of Samples Affected by Plant Parasitic Nematodes
Collection and Storage of Samples Affected by Plant Parasitic Nematodes
When making a sampling plan for estimating nematode numbers, biomass and species composition, a
number of practical and theoretical considerations must be observed. The design of the sampling plan
will partly depend on the purpose of the study, the required accuracy , the time frame, as well as the
costs involved. Besides, when making the plan, knowledge about the variation in space and time of
nematode populations, their biology, and the influence abiotic factors has to be considered, to arrive at
a correct choice regarding timing and depth of sampling, tools, number of samples and the sampling
pattern.
MATERIAL:
Bamboo needle, watch-glass, dissecting microscope, slides, cover slip, fixative, spirit-
lamp.
PROCEDURE:
A. Handling Nematodes: Sharpen the bamboo needles or a tooth brush bristle to a very
fine point and mount in a needle holder. Bring nematode suspension undèr a dissecting
microscope. Lift a nematode from the bottom with a pick and bring it to the surface of
water. Pass the pick under the specimen and it will be held on the pick by surface
tension.
B. Killing the Nematodes: Collect the nematodes in a small drop of water in a watch
glass. Hold it with forceps over a small flame moving it about 5-6 seconds. Watch the
nematode carefully from time to time to avoid overheating.
C. Temporary Mounts: Lift few nemat from watch glass and transfer to a drop of water
on a clean slide. The drop should contain just enough fluid to spread completely to the
edges of the cover slip but not more. Avoid crushing by the use of glass fibres. Cover the
drop with a cover glass and sealed the edges with melted paraffin, vaseline or nail polish
to prevent rapid evaporation.
D. Permanent Mounts: (Golden, 1971).
1. Bring nematodes to a watch glass with 2-3 ml of H20.
2. Incubate the specimens at 43 C for about 12 minutes to relax them,
3. After 12 min pour in warm (43 C) fixative to fill the watch glass almost to the top. The
fixative contains 30 ml formalin, 350 ml distilled water, 8 ml Glycerine.
4. Remove watch glass from oven, cover and maintain at room temperature for 24 hrs
or longer. Add 2 drops of saturated aqueous picric acid. This stain the stylet which other
wise becomes almost invisible in the final preparation.
5. Return the covered watch glass at 43 C and keep it at this termperature for 3 weeks
or longer. Every 2-3 days add warm fixture as needed to offset evaporation.
6. After 3 weeks or longer permit the fixative solution to evaporate completely. Now
add a few drops of pure, warm (43 C) glycerine.
7. . Mount in anhydrous glycerine or stored in sealed vials of glycerine.
Wash roots thoroughly in tap water. Bring the tinted lactophenol (phenol crystal or liquid 20 g lactic acid
20 ml, Glycerine 40 ml, distilled water 20 ml) to a boil + 5 ml 1% sol of acid fuchsin) in a well ventilated
place and boil roots in staining solutions for 1 min. Wash out excess stain with tap water and blot off the
excess water. Place in clear lactophenol solution (without stain) for two days until the roots are
translucent. The nematodes retain dye while the plant tissues de-stained.
Exercise 5
PERMANENT MOUNT
(1) Bring nematodes to a watch glass with 2-3ml of water. Incubate the
specimens at 43°C for about 12 minutes to relax them.
(2) After 12 minutes pour in warm (43°C) fixative to fill the watch glass almost
to the top. The fixative contains 30ml formalin, 350ml distilled water, 8ml
glycerin.
(3) Remove watch glass from oven, cover and maintain at room temperature for
24 hours. Add 2 drops of saturated aqueous picric acid. This stains the stylet
which otherwise becomes almost invisible in the final preparation.
(4) Return the covered watch glass at 43°C and keep it at room temperature for
3 weeks. Every 2-3 days add warm fixture as needed to offset evaporation.
(5) After 3 weeks permit the fixative solution to evaporate completely. Now add
a few drops of pure, warm glycerin. Mount in anhydrous glycerin or stored in
sealed vials of glycerin.
Procedure:
1) Extract nematodes from a known weight of plant tissue or volume of soil.
2) Concentrate the extracted suspension to a precise known volume in a measuring
cylinder or graduated tube.
3) Shake the suspension immediately before removing aliquots. Use a wide mouth
pipette tips to remove aliquots, to prevent blockage by debris. Pipette tips can be
cut if they are too narrow.
4) Carefully pipette aliquots into the counting dish, avoiding splashing. If only a few
nematodes are present, count them in the total suspension volume.
5) If nematode density is high, count the nematode from an aliquot. Dilution of the
suspension may be necessary to aid-counting, for example doubling the volume.
6) Count all the nematodes in the counting dish in a systemic way following the
gridlines on the dish.
Sometimes nematodes may float on the surface, but adding a tiny spot of liquid
soap overcomes this.
7) Use a tally counter.
8) Return the counted aliquot to the suspension after counting.
9) Repeat using 2-3 aliquots per sample and then calculated the mean for the
combined aliquot score before calculating the total nematode number per sample.
10) The mean number of nematodes calculated from the aliquots should be
multiplied by the total volume of the suspension to calculate the total number of
nematodes present in the suspension.
AS PLANTPARASITES
NEMATODES
JulieStantonand GrahamStirling
Contents
8.1 lntroduction
Nematodes are the most abundant group of multicellular animals on earth in
terms of numbers of individuals. There are at least as many nematode species as
insect species. In a square metre of moderately fertile soil to 30 cm depth, there
are about 50 million nematodes. Nathan Cobb, father of nematology in Australia,
provided a good mental picture of the importance and diversity of nematodes
'if
when he stated that all matter in the universe except nematodes were swept
away, our world would still be dimly recognisable-we would find its mountains,
hills, valleys, rivers, lakes and oceans represented by a film of nematodes'. About
half of all nematode species are marine nematodes, 25o/oare free-living, soil-
inhabiting nematodes, I57o are animal and human parasites and lO%oare plant
parasites. Today, even with modern technologr, 5-loo/o of crop production is lost
to nematodes in developed countries.
Nutrients from the oesophagus are metabolised and absorbed by the intestine
into compounds required by the nematode. The intestine also stores reserve food
and excretes wastes combining the functions of both the intestine and liver of
mammals. Intestinal cells of adequately fed nematodes contain large numbers of
proteinaceous and lipid globules as well as glycogen and other storage products.
Without access to a suitable host, plant-parasitic nematodes starve, utilising
intestinal reserves so that the intestine becomes clear.
In most nematode species, the sexes are separate with females being generally
larger than males. Adults of the two sexes are easily distinguished
morphologically (Fig. 8.2A and D). The female gonad has one or two elongated
tubes which may be longer than the nematode's body and therefore they are
coiled or reflexed. At the distal end of the gonad is the ovary where cells divide
forming oocytes. The oocyles enlarge and move to the uterus via the oviduct. In
some species, there is a specialised pouch between the oviduct and uterus. This
is the spermatheca which stores sperm. The eggshell is formed around the
fertilised oocyte in the uterus. The egg is laid from the uterus via the vagina. This
leads to the vulva which is an opening on the ventral wall of the nematode.
8. Nematodes as plant parasttes r29
C,o.
iiililr*€E
A,o-ggs-
B,c: loum
The testis of the male reproductive system (Fig. 8.2D) is similar to the ovary,
having a zorle of cell division, which produces sperrn, and a growth zone, where
the sperm cells enlarge. Sperm accumulates in the enlarged seminal vesicle and
is conducted to the exterior via the vas deferens which is a glandular and
muscular tube. The exterior opening of the reproductive system, the cloaca, is
shared with that of the alimentary canal. The male gonad also possesses two
hook-like structures, the spicules, which originate inside the cloaca. They form a
passageway for sperrn during mating when they are inserted into the vagina of
the female. In some species, the male has lateral cuticular flaps, the caudal alae
or bursa, in the tail region which they use to grasp the female during copulation.
Many types of reproduction have evolved. In most species the sexes are
separate but some species reproduce without males. These may be
hermaphroditic with a gonad that can produce spenn or eggs at different times.
Where only females are known, they lay eggs that develop parthenogenetically.
Parthenogenesis (development of an individual from an egg without fertilisation
by a sperm) is the most common form of reproduction in MeLoidoggne(root-knot
nematode). Depending on the species, the mechanism may be either mitotic or
meiotic. In meiotic parthenogenesis, the second nuclear division does not occur
so that the normal somatic chromosome number is restored and embryogenesis
can proceed. In mitotic parthenogenesis, the mature oocyte undergoes a single
mitotic division, forming a diploid egg. The somatic chromosome number is
consewed and embryogenesis can proceed.
130 Jutie Stanton and Graham Sttrltng
The most obvious component of the nervous system of nematodes is the nerve
ring which encircles the oesophagus just behind the median bulb. This connects
several hundred cells and some sense organs. Longitudinal nerve trunks run
from the nerve ring to the head and to the rest of the body. The nematode's
nervous system is quite sophisticated for an animal of its size. It allows the
nematode to move in any direction, to detect touch and changies in temperature,
to use chemical gradients to find members of the opposite sex and sources of
food, to feed by probing urith the stylet or by activating the stoma, to move
components of the oesophagus to swallow and digest food and to defecate, to
mate, lay eggs and to produce and secrete various compounds from their glands.
The nematode's sense organs are found near the head and around the vulva
and cloaca. A ring of papillae encircles tJre opening of the stoma. TWo pouches in
the head, the amphids, are connected to slits or pores on the lips through which
secretions are released. The amphids combine nerve endings and gland cells. In
hookworms, these are used to secrete anticoagulants into the host's blood.
Amphids of both plant- and animal-parasitic nematodes contain the eruzyrne,
acetylcholinesterase, which is important in nerve physiology. This enzyme is the
target of several nematicides and is similar to that in humans and other animals.
^'"'r^oi""
j u v e n i l e4
1
I embry6eenesis
m o u l t3
I
\
''.^iuu"ri,",
)
i u v e n i l e3
\ /
tou"\,rvenire *'/ noultt
2
Figure 8.3 Generalised life cycle of nematodes. (From O'Brien and Stirling, 1991.)
Materials
• Knife, pair of scissors or blender;
• Cotton-wool milk filter or equivalent (e.g. cheesecloth,
filter paper, paper towel);
• Funnel made of glass with a piece of soft polyethylene
tube attached to the stem and closed with a spring or
screw clip (Fig. 1). Recommended slope of funnel is
approx. 30°. For the Oostenbrink dish method plastic or
stainless steel dishes (pie pan) are used (Fig. 2);
• Stand to hold the funnel;
• Support, such as plastic sieve or wire basket of large
enough aperture to allow nematode passage (i.e.
250 lm); Fig. 1 Modified Baermann funnel for extracting nematodes from plant
• 20 or 25 lm aperture sieve; material or soil (Photo: JKI, Germany).
• 100 mL glass beaker;
• Dissecting, inverse or compound microscope;
• Counting slide;
• Collect nematodes after 24–72 h by opening the spring or
• Microscope slide.
screw clip on the funnel stem or by collecting the nema-
todes of the dish in a glass beaker;
Procedure
• Let the nematodes settle in the glass beaker and
• Peel and chop plant tissue such as wood chips (for prepa-
remove the supernatant, or pass suspension in the bea-
ration of wood samples for Bursaphelenchus xylophilus
ker over a 20 or 25 lm sieve to reduce the volume of
see Appendix 3 of PM 9/1), leaves, roots, bulbs or tubers
water;
in 1 cm pieces or macerate in a blender for up to 1 min
• Examine nematodes within a counting slide at 25–409
depending on source of plant material; seeds remain
magnification using a dissecting or inverse microscope or
intact or can be split longitudinally to facilitate nematode
transfer nematodes with a handling needle to a micro-
removal (e.g. Aphelenchoides besseyi/rice, Hoshino &
scope slide for inspection at higher magnification in a
Togashi, 1999);
compound microscope.
• Place plant material on the cotton-wool milk filter placed
within a support (sieve);
Advantages
• Submerge support with sample gently in the water of the
•Simple and inexpensive;
funnel/dish;
•Small amount of water;
• Nematodes leave the plant tissue, pass through the cot-
•Final suspension is clean;
ton-wool milk filter and sink to the bottom of the funnel
•Good recovery of motile nematodes from small samples.
stem or dish, respectively;
Table 6 Methods recommended for the extraction of nematode cysts from dry and wet soil as listed in the corresponding EPPO Diagnostic Protocols
Materials
• Fenwick can (Fig. 14);
• 1 mm aperture top sieve;
• 200 or 250 lm aperture sieve (d = 20 cm) for collecting
the cysts;
• 840 lm aperture sieve (facultative);
• Filter paper;
• Dissecting microscope.
Fig. 13 Baunacke method (courtesy Van Bezooijen, 2006) performed
with a 180 µm sieve (for Globodera spp. and Heterodera glycines a
Procedure
200 or 250 µm sieve is recommended).
• Clean the can with water, close the outlet at the bottom
Procedure and fill the can to the rim with water;
• Pass the dried soil with a jet of water through a 200 or • Place a 200 or 250 lm aperture sieve under the outlet of
250 lm sieve to eliminate soil and small organic particles the overflow collar;
(Fig. 13); • Wash the air-dried soil sample through the top sieve
• Transfer the debris remaining on the 200 or 250 lm sieve (1 mm) into the can with a strong jet of water;
into a plastic beaker or bowl; • Leave the water running for approx. 5 min. until water
• Stir the suspension thoroughly; overflow is clean;
• Let the suspension settle for 30 s to some min; depending • Heavy soil particles will sink to the bottom of the can,
on the soil type, the water is cleared and the liquid will cysts and light root debris will overflow;
only contain the floating organic debris and cysts; • Collect overflow including cysts on the 200 or 250 lm
• Add a drop of detergent that causes the cysts to move to sieve beneath the outlet of the collar;
the edge; • Rinse the funnel and collar very well to gather all cysts
• Pick the cysts by hand under a dissecting microscope on the 200 or 250 lm sieve;
using forceps or a fine painting brush. • Remove stopper at bottom of can to remove the remain-
der of the sample, rinse the can and the 1 mm sieve
Advantages before the next sample is processed;
• Simple, quick and cheap; • Transfer the material collected on the 200 or 250 lm
• Little use of water. sieve on a filter paper;
• Count cysts and process them for identification using a
Disadvantages dissecting microscope.
• Sample size is limited to about 100 mL soil;
• Results depend highly on individual person. Advantages
• One person can process a large quantity of samples;
Remarks • Easy to construct.
Alternatively, use a paper strip around the beaker and raise
the water level so cysts can adhere to it (Buhr, 1954). Care- Disadvantages
fully remove the paper strip with the attached cysts from the • Soil samples must be dried beforehand;
beaker. Sieves with smaller aperture up to 100 lm should • Large amount of water.
be used for catching smaller cysts (e.g. Heterodera carotae).
N
ematodes belong to the kingdom Animalia. Nema- humans and animals, in which they cause various dis-
todes are wormlike in appearance but quite eases. Several hundred species, however, are known to
distinct taxonomically from the true worms. feed on living plants, obtaining their food with spears
Most of the several thousand species of nematodes live or stylets (Fig. 15-1) and causing a variety of plant dis-
freely in fresh or salt waters or in the soil, and feed on eases worldwide. The annual worldwide losses caused
FIGURE 15-1 (A) Typical plant parasitic nematode. (B) Close-up of the head of a plant parasitic nematode showing
the spear or stylet. Scale bars: 10 mm. [From McClure and von Mende (1987), Phytopathology 77, 1463–1469.]
C H A R AC T E R I S T I C S O F P L A N T PAT H O G E N I C N E M ATO D E S 827
Stylet
Stylet tip Mouth Lip region
Muscles
Esophagus
Median bulbs Stylet
of esophagus Lips
Cuticle
Salivary glands
Stylet knobs
Nerve ring
Intestine
Ovary
Salivary Nerve
gland ducts Testis
Cuticle
Esophagus
Hypodermal
cord
Egg
Body cavity
Body muscle Spermatheca
Uterus
Cuticular
annulations Vulva
Sperm Anus
Phasmid
Cross Section of Nematode
Spicule
FIGURE 15-2 Morphology and main characteristics of typical male and female plant parasitic nematodes.
828 1 5 . P L A N T D I S E A S E S C AU S E D B Y N E M ATO D E S
22
Longidorus
2 Helicotylenchus
Dolichodorus
3 21
Belonolaimus Rotylenchulus
4 Criconema 20
Anguina
5
Xiphinema Tylenchulus
19
6 Hoplolaimus
7 Rotylenchus
8 Hemicycliophora
9 Ditylenchus Meloidogyne 18
10 Aphelenchoides
11 Tylenchorhynchus
12 Trichodorus
13 Radopholus
14 Pratylenchus Heterodera 17
15 Criconemoides
16 Paratylenchus
0 250 m 500 m 750 m 1000 m 1250 m 1500 m 1750 m 2000 m 2250 m 2500 m 2750 m 3000 m
FIGURE 15-3 Morphology and related sizes of some of the most important plant parasitic nematodes.
but they can be observed easily under the microscope. The reproductive systems of nematodes are well
Nematodes are, in general, eel shaped and round in developed. Females have one or two ovaries, followed
cross section, with smooth, unsegmented bodies, by an oviduct and uterus terminating in a vulva. The
without legs or other appendages. The females of some male reproductive structure is similar to that of the
species, however, become swollen at maturity and have female, but there is a testis, seminal vesicle, and a ter-
pear-shaped or spheroid bodies (Fig. 15-3). minus in a common opening with the intestine. A pair
of protrusible, copulatory spicules are also present in the
male. Reproduction in plant parasitic nematodes is
Anatomy through eggs and may be sexual or parthenogenetic.
Many species lack males.
The nematode body (Fig. 15-2) is more or less trans-
parent. It is covered by a colorless cuticle, which is
usually marked by striations or other markings. The Life Cycles
cuticle molts when a nematode goes through the suc-
cessive juvenile stages. The cuticle is produced by the The life histories of most plant parasitic nematodes are,
hypodermis, which consists of living cells and extends in general, quite similar (Fig. 15-4). Eggs hatch into
into the body cavity as four chords separating four juveniles, whose appearance and structure are usually
bands of longitudinal muscles. The muscles enable the similar to those of the adult nematodes. Juveniles grow
nematode to move. in size, and each juvenile stage is terminated by a molt.
The body cavity contains a fluid through which cir- All nematodes have four juvenile stages, with the first
culation and respiration take place. The digestive system molt usually occurring in the egg (Fig. 15-4B). After the
is a hollow tube extending from the mouth through the final molt the nematodes differentiate into males and
esophagus, intestine, rectum, and anus. Lips, usually six females. The female can then produce fertile eggs either
in number, surround the mouth. Most plant parasitic after mating with a male or, in the absence of males,
nematodes have a hollow stylet or spear (Fig. 15-1B), parthenogenetically.
but a few have a solid modified spear. The spear is used A life cycle from egg to egg may be completed within
to puncture holes in plant cells and through which to 2 to 4 weeks under optimum environmental, especially
withdraw nutrients from the cells. temperature, conditions but will take longer in cooler
C H A R AC T E R I S T I C S O F P L A N T PAT H O G E N I C N E M ATO D E S 829
B
A
E F
FIGURE 15-4 Stages in a life cycle and the infection process of plant parasitic nematodes. (A) Nematode eggs.
(B). Nematode eggs and hatching second-stage juvenile. (C) Typical plant parasitic nematode ready to infect plant.
(D) Juvenile and adult ectoparasitic ring nematodes feeding on root. (E) Aphelenchus nematodes present inside plant
cells. (F) Radopholus nematodes feeding inside plant root. [Photographs courtesy of (A, C, E, and F) University of
Florida, (B) U. Zunke, (D) S. W. Westcott III.]
830 1 5 . P L A N T D I S E A S E S C AU S E D B Y N E M ATO D E S
temperatures. In some species of nematodes the first or own power. Further spread takes place on contact of
second juvenile stages cannot infect plants and depend infected plant parts with adjacent healthy plants.
on the energy stored in the egg for their metabolic func- Two genera of the family Aphelenchoididae, namely
tions. When the infective stages are produced, however, Aphelenchoides (bud and leaf nematodes) and Bur-
they must feed on a susceptible host (Figs. 15-4D–15- saphelenchus (the pine wilt and red-ring nematodes),
4F) or starve to death. An absence of suitable hosts may seldom, if ever, enter the soil. They survive instead in the
result in the death of all individuals of certain nematode tissues of the plants they infect and, for the latter, in its
species within a few months, but in other species the insect vectors.
juvenile stages may dry up and remain quiescent or the
eggs may remain dormant in the soil for years.
Classification
Ecology and Spread All plant parasitic nematodes (Fig. 15-3) belong to the
phylum Nematoda. Most of the important parasitic
Almost all plant pathogenic nematodes live part of their genera belong to the order Tylenchida, but a few belong
lives in the soil. Many live freely in the soil, feeding to the order Dorylaimida.
superficially on roots and underground stems, and in all,
even in the specialized sedentary parasites, the eggs, the Phylum: Nematoda
preparasitic juvenile stages, and the males are found in Order: Tylenchida
the soil for all or part of their lives. Soil temperature, Suborder: Tylenchina
moisture, and aeration affect survival and movement of Superfamily: Tylenchoidea
nematodes in the soil. Nematodes occur in greatest Family: Anguinidae
abundance in the top 15 to 30 centimeters of soil. The Genus: Anguina, wheat or seed-gall
distribution of nematodes in cultivated soil is usually nematode
irregular and is greatest in or around the roots of sus- Ditylenchus, stem or bulb nematode of
ceptible plants, which they follow sometimes to consid- alfalfa, onion, narcissus, etc.
erable depths (30–150 centimeters or more). The greater Family: Belonolaimidae
concentration of nematodes in the region of host plant Genus: Belonolaimus, sting nematode
roots is due primarily to their more rapid reproduction of cereals, legumes, cucurbits, etc.
on the food supply available and also to attraction of Tylenchorhynchus, stunt nematode of
nematodes by substances released into the rhizosphere. tobacco, corn, cotton, etc.
To these must be added the so-called hatching factor Family: Pratylenchidae
effect of substances originating from the root that Genus: Pratylenchus, lesion nematode
diffuse into the surrounding soil, markedly stimulating of almost all crop plants and trees
the hatching of eggs of certain species. Most nematode Radopholus, burrowing nematode of
eggs, however, hatch freely in water in the absence of banana, citrus, coffee, sugarcane, etc.
any special stimulus. Nacobbus, false root-knot nematode
Nematodes spread through the soil slowly under their Family: Hoplolaimidae
own power. The overall distance traveled by a nematode Genus: Hoplolaimus, lance nematode
probably does not exceed a few meters per season. of corn, sugarcane, cotton, alfalfa,
Nematodes move faster in the soil when the pores are etc.
lined with a thin film of water (a few micrometers thick) Rotylenchus, spiral nematode of
than when the soil is waterlogged. In addition to their various plants
own movement, however, nematodes can be spread Heliocotylenchus, spiral nematode of
easily by anything that moves and can carry particles of various plants
soil. Farm equipment, irrigation, flood or drainage Rotylenchulus, reniform nematode of
water, animal feet, birds, and dust storms spread nema- cotton, papaya, tea, tomato, etc.
todes in local areas, whereas over long distances nema- Scutellonema, dry rot nematode of yam,
todes are spread primarily with farm produce and cassava, etc.
nursery plants. A few nematodes that attack the above- Family: Heteroderidae
ground parts of plants not only spread through the soil Genus: Globodera, round cyst nema-
as described earlier, but they are also splashed to the tode of potato
plants by falling rain or overhead watering. Some Heterodera, cyst nematode of tobacco,
species ascend wet plant stem or leaf surfaces on their soybean, sugar beets, cereals