General Biology 2: Quarter III - Module1: Genetic Engineering
General Biology 2: Quarter III - Module1: Genetic Engineering
General Biology 2: Quarter III - Module1: Genetic Engineering
Department of Education
Region I
SCHOOLS DIVISION OF ILOCOS NORTE
General Biology 2
Quarter III – Module1:
Genetic Engineering
Prepared by:
ANDY A. DALIDA
Davila National High School
Science SHS – General Biology 2
Share-A-Resource-Program
Quarter 3 – Module 1: Genetic Engineering
First Edition, 2020
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Pre-test is provided to measure your prior knowledge on the lesson. This will
show you if you need to proceed in completing this module or if you need to ask
your facilitator or your teacher’s assistance for better understanding of the lesson.
At the end of this module, you need to answer the post-test to self-check your
learning. Answer keys are provided for all activities and tests. We trust that you
will be honest in using them.
In addition to the material in the main text, Notes to the Teacher is also
provided to our facilitators and parents for strategies and reminders on how they
can best help you in your home-based learning.
Please use this module with care. Do not put unnecessary marks on any
part of this CLM. Use a separate sheet of paper in answering the exercises and
tests. Likewise, read the instructions carefully before performing each task.
If you have any question in using this CLM or any difficulty in answering the
tasks in this module, do not hesitate to consult your teacher or facilitator.
Thank you.
What I Need to Know
This module was designed and written with you in mind. It is here to help
you master the nature of Biology. The scope of this module permits it to be used in
many different learning situations. The language used recognizes the diverse
vocabulary level of students. The lessons are arranged to follow the standard
sequence of the course. But the order in which you read them can be changed to
correspond with the textbook you are now using.
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What I Know
Choose the letter of the best answer. Write the chosen letter on a separate sheet of
paper.
a. Reduced biodiversity
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6-10: True or False
Lesson
Genetic Engineering
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What’s In
As part our review, lets us define the terms and let’s see how much
knowledge have you learned in your previous subjects.
Chromosome Cloning
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Note the Teachers
The teacher must consider the prerequisite skills needed in
the development of this competency including the schema or
background knowledge which may reinforce learning. This
module will help the learners bridge the gap of learning to attain
mastery of the lesson in its spiral progression.
What is New
PRE-ACTIVITY
1. How organisms may be modified?
2. What are the different modifying techniques in genetic engineering?
3. Enumerate some plants and animals that have desirable or enhanced traits
and how each of the traits was introduced or developed. Modifying
Technique ex. Classical Breeding, Recombinant DNA Technology.
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What is It
Genetic Engineering
The term genetic engineering initially referred to various techniques used for
the modification or manipulation of organisms through the processes
of heredity and reproduction. As such, the term embraced both artificial selection
and all the interventions of biomedical techniques, among them artificial
insemination, in vitro fertilization (e.g., “test-tube” babies), cloning,
and gene manipulation. It was first introduced in our language in the 1970s to
describe the emerging field of recombinant DNA technology and some of the things
that were going on.
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2. enhancement of a present trait by increasing the expression of the
desired gene
3. enhancement of a present trait by disrupting the inhibition of the desired
genes’ expression
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In most cases, the desired organism is human or other organisms of human
interest. While the organism of choice is mostly bacteria or yeast.
But why only bacteria and yeast? Because they can be quickly grown and
also their life cycle completes in a few hours to days. Due to this, we get the desired
product formed in a short time. Because of such a short lifespan, they express the
transferred gene to the fullest and we obtain the product very fast.
To isolate the desired gene, the entire gene or DNA from the organism of
interest has to be extracted. This can be done by homogenization of tissue
(breaking the cells) or by the use of surfactants to break up the cell membrane of
the cell of choice. Once the homogenate is obtained, the entire gene is separated by
differential centrifugation (density-based). This whole-genome is now taken up to
isolate the desired gene.
Here the DNA coding for the desired protein is isolated. This is a critical task
and can be done by any of the following four methods like
1. Mechanical shearing.
2. Chemical synthesis.
3. By the use of restriction endonucleases.
4. Complimentary DNA method.
Mechanical shearing
Here the required gene is cut off from the whole gene by use of mechanical
force. This can be done by methods like the sonication, nebulization, point shink
shearing, needle shear, etc. This method leads to the formation of random DNA
fragments.
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Chemical synthesis
As the name indicates, here the desired gene is synthesized by the use of
free nucleotides. For this, the target protein is isolated and from it, the required
nucleotide sequence is deduced.
In this method, the whole genome is taken and subjected to the enzyme
restriction endonucleases. This enzyme cuts the DNA at specific points like the
scissors. The gene obtained by this is quite perfect and hence widely used.
Here the desired DNA sequence is synthesized from the messenger RNA
which codes of the specific protein of choice. For this, the enzyme reverse
transcriptase is used to synthesize the double-stranded DNA sequence.
2. Selection of vector
A vector is a vehicle to carry the desired gene into the genome of another
organism. This helps us to see that the gene is not destroyed during transfer. Also,
the gene will be operational inside the new organism due to vector. These vectors
have some specific properties like
b) Cosmids:
c) Phasmid
d) Transposons
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e) Bacteriophage (virus)
f) Yeast
g) Shuttle vectors:
These vectors are large pieces of DNA molecules mostly. The plasmid is a
circular, single-stranded, and self-replicable DNA molecule present inside bacteria.
They help in the sexual reproduction of bacteria by transfer of genetic matter from
one to another. Here we use them to transfer the desired gene.
A bacteriophage is a virus that attacks bacteria and inserts its gene into the
bacterial cell for multiplication. Cosmid is similar to plasmid DNA but can
accommodate large DNA pieces.
Transposons: These are movable genes or jumping genes which move from
one cell to another or plasmid to the nucleus. The size is very small like 1kb to 2kb
(1kb =1000nucleotide). This transposon has no “marker gene” and “ori gene.”
Yeast cloning vector: These are used to transfer the desired gene into fungi.
This is a similar plasmid with little modification.
Shuttle vector: These vectors have ori-gene, promoter gene for both bacteria
and fungi. So it is two in one type of process.
3.Transfer of r-DNA
The isolated gene is now transferred into the vector in this step. a is done by
any of the four techniques viz.
Cohesive technique: Here cohesive ends are formed for joining with the
vector. Restriction endonuclease enzyme is used to cut the desired gene and also
plasmid. By this cohesive ends are formed. These cohesive ends in both plasmid
and the desired genes are easily attachable.
Homopolymer chain: Here polymers are formed at the ends of the gene to fix
with the vector.
Blunt end joining. Here the genes with blunt ends are joined to vector by use
of DNA ligase enzyme.
Use of Cos sites. Cos site is one that has 12 nucleotide chains. The vector with the
gene is transferred into a bacteriophage. As we know, the bacteriophage is
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a virus that attacks bacteria and multiplies. So bacteriophages transfer the desired
gene loaded vectors.
4.Transformation of rDNA
Here the vector with the tagged desired gene is transferred into the organism
of interest, i.e., bacteria or fungi in most cases. This is done by creating holes in
the bacterial cell wall. For this, we use two methods
By use of CaCl2: Here bacteria and calcium chloride are taken in a Petri dish
and cooled to 0-4 degrees. Then rDNA is added and the temperature is suddenly
raised to 42degree. When cooled the bacterial wall shrinks and when heated
instantly, it expands abnormally creating pores in the wall. The loaded vector
enters the cell through these pores.
For those bacteria which do not tolerate this temperature, this method is not
used.
By Transduction: Here the desired gene is loaded into cosmid and inserted
into an empty capsule of the virus. The transformed virus is introduced into a
beaker of E-coli. The modified virus enters into E-coli by transduction methods.
Once the transformation is done, now we need to identify and isolate those
bacteria from culture media which have the vector within.
A cylindrical vessel with a flat bottom with muslin cloth wound is pressed
over those colonies. E colonies get fixed to the cloth which is again touched to the
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surface of fresh media. Thus the bacteria with r-DNA are isolated. These are grown
in culture media in the presence of the promoter genes to get the desired product.
The above method is not suitable for yeast and virus. So other
immunological techniques like nucleic acid hybridization, polymer chain reaction
are used.
Because all the genes in the genetic material do not activate at all times. So
the transgenic gene needs and external stimuli to produce the mRNA by
transcription. This mRNA which is coded for the desired substance is translated
into the protein.
There are also ways on how plasmids may be introduced into host
organisms:
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the procedure to increase the pore size of their plasma membranes. The
pre treatment (usually CaCl2) is said to make the cells “competent” for
accepting plasmid DNA. After the cells are made competent, they are
incubated with the desired plasmid at about 4°C for about 30min. The
plasmids concentrate near the cells during this time. Afterwards, a “Heat
Shock” is done on the plasmid-cell solution by incubating it at 42°C for 1
minute then back to 4°C for 2 minutes. The rapid rise and drop of
temperature is believed to increase and decrease the pore sizes in
the membrane. • The plasmid DNA near the membrane surface are
taken into the cells by this process. The cells that took up the
plasmids acquire new traits and are said to be “transformed”.
3. Electroporation- This technique follows a similar methodology as
Heat Shock Treatment, but the expansion of the membrane pores is
done through an electric “shock”. • This method is commonly used
for insertion of genes into mammalian cells.
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What’s More
Source: biologycorner.com
Direction: Determine which technologies are most appropriate for these cell
types.
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What I Can Do
ADVANTAGES DISADVANTAGES
1.
2.
3.
4.
5.
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Lesson Discuss the Applications of
2 Recombinant DNA
What’s In
As part our review, lets us define the terms and let’s see how much
knowledge have you learned in your previous subjects.
Clone Plasmids
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What is New
It was reported last 2019 in cnet.com that scientist have created the first
spicy tomato using CRISPR gene editing techniques. Tomatoes are known to have
capsaicinoids ( the chemical that gives chillies their heat) but they are dormant.
Crispr could be used to make them active and it is beneficial in different industries.
Moreover, the glowing tobacco plant also contains the gene for luciferase
from fireflies, which allows the plant to glow. Created at UCSD in 1986, the overall
purpose was to determine the usefulness of using the gene for luciferase as a
reporter for expression of other genes.
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What is It
Food Industry
Pharmaceutical Industry
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Hepatitis B is an infection of the liver that can be prevented with the
hepatitis B vaccine. Recombinant DNA of the hepatitis B virus surface antigen is
produced in yeast cells to be included in the vaccine. This is beneficial as the
hepatitis virus does not proliferate in vitro and recombinant DNA provides a
method to create the DNA needed to control hepatitis B.
Medical Research
Recombinant DNA has been used in the development of the most common
diagnostic techniques for HIV.
Agricultural Industry
Some commercial crops, such as soy, maize, sorghum, canola, alfalfa and
cotton, are grown with recombinant DNA that increases resistance to herbicides
used in the agricultural process. Glyphosate is the herbicide known commonly as
Roundup is widely used among farmers to help with weed control and recombinant
genes in the agricultural crops allow them to grow without being affected by the
herbicide.
PCR Amplification
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What’s More
ACTIVITY
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2. Discuss why recombinant DNA is one of the promising technologies
nowadays?
What I Can Do
Challenge!
Surf from the internet one product of Recombinant DNA that
contributes a lot in the society which could be food, hormone, or
vegetable. Describe the chosen product and give its features and
its importance. Submit the soft copy of your work to your teacher.
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Assessment
Multiple Choice. Choose the letter of the best answer. Write the chosen letter on a
separate sheet of paper.
d. Make transgenic bacteria that can be used to clean up oil spills more
quickly than natural bacteria
a. Selective Breeding
b. Inbreeding
c. Genetic Engineering
d. Hybridization
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5. In recombinant DNA, what causes the plasmid to open?
a. Inbreeding c. Hybridization
b. Mutations d. Radiation
a. Cloning c. Radiation
a. Reduced biodiversity
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Additional Activities
Answer the following questions in the link.
1. https://tinyurl.com/gen-engineering
2. https://tinyurl.com/gen-engineering2
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Answer Key
1. A 1. Clones 1. Biolistics
2. B 2. Defects 2. Mammalian Cells
3. A 3. Poodles 3. Plant Cells
4. C 4. Increase Variation 4. Heat Shock
5. A 5. DNA Extraction Treatment
6. FALSE 6. Separating of DNA 5. Electroporation
7. TRUE 7. Restriction
8. FALSE Enzymes
9. FALSE 8. Hybrids
10. TRUE 9. DNA
10. Bacteria
11. Transgenic
Assessment
1. D
2. B
3. A
4. C
5. B
6. A
7. B
8. C
9. B
10. A
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References
"K To 12 Curriculum Guide In General Biology 2". 2016. Deped.Gov.Ph.
https://www.deped.gov.ph/wpcontent/uploads/2019/01/General
Biology 2-CG.pdf.
Belardo, Gisselle M., 2016. Biology . Quezon City. Vibal Publishing House.
Pagunasan, Manuela P., et. al., 2007. Biology. Quezon City. SalesianaBOOKs Publishing
House Inc.
www.biologycorner.com
https://worldwide.promega.com/resources/guides/nucleic-acid-analysis/pcr-amplification/
https://www.britannica.com/science/genetic-engineering
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