Untitled
Untitled
Untitled
Submitted by:
Baricuatro, Nikkolee P.
Diaz, Karl Anthony A.
Patino, Nestor II M.
Senagan, Loise Marie G.
May 2022
APPROVAL SHEET FOR PROPOSAL DEFENSE
In partial fulfillment of the requirements for the degree of Bachelor of Science in Biology this
RESEARCH entitled:
“AN UPDATED WATER QUALITY ASSESSMENT: DETECTION OF AMOXICILLIN
AND PENICILLIN AND THE PRESENCE OF COLIFORMS IN TAMUGAN,
PANIGAN RIVERS, CALINAN AND TALOMO RIVER, DAVAO CITY”
has been prepared and submitted by Nikkolee Baricuatro, Karl Anthony Diaz, Nestor Patino
and Loise Marie Senagan after passing the Oral Defense.
APPROVED in partial fulfillment of the requirements for the degree of Bachelor of Science in
Biology by the Chair of the Department and the Director of Research and Publication Office
(RPO).
ACCEPTED in partial fulfillment of the requirement for the degree of Bachelor of Science in
Biology.
From the creation of our thesis proposal through the completion of our final thesis paper,
we are grateful to Ma'am Maria Catherine B. Otero and Ma'am Marian Dara Tagoon, our thesis
mentors, for their expertise, tireless efforts, and advice. We appreciate their help and valuable
well as Sir Michael Dann Superio, Sir Anthony Pingoy, and Sir John Paul Banzon's support and
We wish to thank Ma’am Leah Jane Ofima for her help regarding our data analysis.
To the barangay officials of our chosen locations where we conducted our sampling, we
are very thankful for giving us the permission to enter the site.
Finally, we want to express our gratitude to our family, friends, and classmates for their
unwavering support and encouragement throughout the research and as we complete our thesis
successfully.
TABLE OF CONTENTS
TITLE PAGE i
APPROVAL SHEET ii
ABSTRACT iii
ACKNOWLEDGEMENT iv
TABLE OF CONTENTS v
LIST OF FIGURES vi
INTRODUCTION
Objectives
Definition of Terms
List of Acronyms
METHODOLOGY
Research Design
Setting
Population
Sampling
Data collection procedure
Ethical considerations
RESULTS
Results
Discussions
Summary/Conclusions
Recommendations
REFERENCES
APPENDICES
LIST OF FIGURES
Davao City is the prime tourist destination in Mindanao and has been developing its
economy over the years, which resulted in an accelerated increase of population. According to
the Philippine Statistics Authority (2018), there has been an annual population growth rate of
2.30%; from an estimate of only 1.1 million in 2000 to 1.6 million in 2015. Although this is an
improvement for the city’s economy, it also comes with environmental ramifications. As
population rate continues to increase due to urban developments and opportunities, this produces
agricultural pursuits, as well as personal activities have impacted Davao City’s environment and
ecological system, and as long as species continue to coexist in one ecosystem, this would result
physiological change in an ecosystem will counteract to the organisms living within the
ecosystem and vice versa (Seebacher & Franklin, 2012). An example of alarming environmental
risk anthropogenic activities initiates is ineffective waste management and water pollution.
Freshwater is of great importance due to its versatility; from providing maintenance and
supports a wide spectrum of species, supply viable source of potable water, and provides
utilization in numerous anthropogenic activities such as agriculture, industrial, and personal use
(Singh, Mishra, Dwivedi &, Mishra, 2017). However, due to the misuse of such an important
contributor to the environment and the needs of numerous species, this has impacted water
quality resulting in water contamination to which water contamination poses a major worldwide
Antibiotics have become the central component for treating different infectious diseases
and it contributed significantly to the global health development during the last 70 years (Wall,
2019). Aside from being mainly used in medical therapeutics, it is extensively used in
conventional agriculture for treatment and prevention from diseases, and also overall therapy
(Kraemer et al., 2019). With antibiotics being primarily seen as a medicine that aids numerous
organisms from infections and diseases, the use of antibiotics also comes with a caveat. While
antibiotics are used to suppress microbial infections, misuse and overuse of such drug may cause
antimicrobial resistance of which the World Health Organization (2020) has deemed
antimicrobial resistance to be one of the most dangerous global public health threats in humanity
for infection and disallows the body to respond to antibiotics resulting in life-threatening
situations wherein no drug can alleviate infections. With regards to this, antibiotic residues are
possible sources of antibiotic resistance genes that may contaminate natural environments; not
only leading to environmental pollution, but also potential in spreading antibiotic resistance that
may lead to the use of the wide spectrum of drug compounds for treatment (Mahmood et al.,
2019). Significant existence of antibiotics in the environment is due to multiple factors, including
the release of unabsorbed antibiotics by animals and humans into the water stream, and discarded
residues or unused antibiotics from medicinal practices, laboratories, and factories, are discarded
into the water stream (Kraemer et al., 2019). Thus, makes the presence of these drugs possible in
the environment; to which no studies regarding the detection of antibiotics within the rivers of
organisms and their environment occur naturally. Waterways, particularly rivers, play a vital role
in disseminating antibiotic resistance genes (Pruden et al., 2013). Waterways that circulate and
are distributed for multiple organisms to use and consume may react to a chain of food webs that
could result in a large-scale effect. For example, a study by Wu et al. (2018) showed the relation
of egret birds carrying antimicrobial resistant genes acquired from contaminated waterways and
spreading AMR genes to its close surrounding through excretion via minimum inhibitory
Escherichia coli isolates in the environment; to which results show that presence of antibiotic
resistance in near environments to which where egrets circulate, was abundant. Furthermore,
results of the real-time PCR showed that the transportation of antimicrobial resistance genes
could be due to mobile genetic element, together with horizontal gene transfer as colistin
resistant gene mcr-1 was detected from the colistin-resistant E.coli strains of egret feces from the
sample collected from the river. This suggests that the egret birds did, in fact, acquire carrying
AMR from waterways, and are potential contributors to distributing AMR to the environment.
to this, surface water including rivers in urban areas have become a health threat to the public
while in rural areas become sources of sickness. Furthermore, they also stated that The World
Bank evaluates the exposure of water pollution and poor sanitation of which resulted in one-sixth
of cases reported with around 6,000 premature deaths annually to which thirty one percent of the
Apart from detection of antibiotics in specific waterways, this study also focuses on
detecting total coliform bacteria as its presence in waterways serves as an important indicator for
water quality assessment and whether a water supply is contaminated or not (Pepper & Gerba,
2015). Total coliform consists of a wide variety of species that commonly inhabit the
environment and feces of warm-blooded species of which the most common form of coliform
found in drinking water supplies are species of the fecal coliform such as Escherichia coli (E.
coli) (New York State Department of Health, Center for Environmental Health, 2017).
gastrointestinal tract of humans and some mammals forming a commensal relationship with
regards to their host (Allocati et al., 2013). Furthermore, these species are capable of transmitting
mild to severe infectious diseases due to its versatility in adapting to different niches, which
enables them to acquire pathogenic and virulence factors (Kapler, Nataro, & Mobley, 2004).
strategic alternative that will change Davao City’s primary source of water from groundwater
wells to surface water due to complications with heavy water consumption from groundwater
sources as statistics have shown that for the last 40 years, the city has been heavily reliant on
groundwater covering 320 million liters of water per day in 2019; suggesting that consumption
of groundwater is used at a more rapid rate causing wells to dry up and land to sink making this a
problem for water quality and allowing contamination in the long run (Llemit, 2019). In addition
to that, if groundwater wells continue to reach a point of degradation at sea level, this will result
in water contamination, which will be an immense problem for the city’s water source. Thus, by
2021, DCWD is aiming for Davao City to rely on the Tamugan watershed as sources of potable
water (Banzon, 2020). Under the Watershed Code (City Ordinance No. 0310-07), the city
prioritizes the quality of raw water in the city by preventing the establishment of large
infrastructures and conventional agriculture using synthetic practices (Ibanez, 2015). However,
human settlement and industrial activities by large companies such as Dole and Highland Banana
Plantations, Davao Fresh Food Corp., Heroes Agriculture venture/Vitarich, and Ana’s Breeding
Farm have caused alarming environmental impacts such as soil erosion and degradation,
flooding in the lowlands, and pollution due to the use of agrochemicals thus, resulting in possible
contamination in the watersheds, which may affect the quality of raw water in the
water assessment of Panigan-Tamugan rivers as stated by Llemit (2019), results showed of high
detection of fecal contamination of fecal coliforms with its most probable number (MPN) was
above the normal scale of detection set by DENR (160,000MPN/100mL > 1.1MPN/100mL).
Similar to the case of Panigan-Tamugan rivers, factories and establishments also surround
Talomo river. Although Davao city is no longer reliant on Talomo river as its primary source of
potable water, the Talomo river still covers 38,000 square meter of land, which serves 53 villages
that gives access to individuals for their personal use making it of greater concern especially
since the water quality assessment of Talomo river as of 2020 stated that the river failed in the
the entire length of the river (Sunstar Davao, 2018; Environmental Management Bureau, 2020).
No further updates have been identified with regards to total coliform assessment and antibiotic
detection therefore, it is only as important to discover such presence of fecal coliforms, and
whether or not changes in MPN have been made over the years to assess whether or not the new
shift in primary water source is indeed safe for consumption and to analyze its correlation to the
Objectives
This study aims to assess the water quality of possible water sources in Davao City by
investigating the presence of coliforms, and antibiotics in the Panigan-Tamugan and Talomo
1.) Assess water quality of the three rivers with regards to the presence of coliform and
2.) Determine the presence or absence of Amoxicillin and Penicillin in the rivers using
3.) Establish the presence of total coliform and fecal coliform by most probable number
(MPN).
Studies on the presence of antibiotics in our local waterways are lacking. To the
knowledge of the researchers, this research will be the first to explore the presence of antibiotics
in Talomo, Panigan-Tamugan rivers of which the three rivers are situated in upstream river
locations, which mostly cover agricultural, poultry, swamp, brush, and forest lands (Ibanez,
Tampons, Maglinte, & Reazonda, 2012). Therefore, with this surrounding being a cohesive
human inhabitants circulating the said areas that allow for the spread of microorganisms,
information to the current quality assessment of the rivers in terms of antibiotic pollution and
presence of total coliform; more specifically fecal coliform, and eventually contribute to further
research regarding antibiotics in rivers. In addition to this, Gumba (2020) stated that the
Panigan-Tamugan river’s water quality is clean for drinking consumption. However, due to
environmental factors, the Interface Development Interventions (IDIS) reports that water quality
has degraded its quality from “Class AA” to “Class A” (Cortez, 2017) and as stated by Llemit
(2021) the Panigan-Tamugan watershed faces problems with water pollution and contamination
due to large quantities of garbage wastes found along the river and anthropogenic activities
within the area, which may affect total and fecal coliform count in all three rivers. This would
entail significance in the need for assessing the water quality with regards to the presence of
antibiotics and fecal coliforms especially since surface waters of Tamugan river is set to become
Davao’s new primary water source of which Panigan river is connected to. Furthermore, Talomo
river will also take part in significance since it is adjacent to Panigan-Tamugan rivers and was
Davao’s primary ground water source prior to Panigan-Tamugan rivers to which the shift of
water sources was developed due to rising problems with contamination in Talomo river.
Furthermore, Talomo river covers 38000 square meters of land to which industries and human
settlements making the river readily available for anyone to use, and according to Llemit (2021),
the river is still facing issues with regards to pollution and contamination, similar to
Panigan-Tamugan rivers, due to the abundance of industrial and agricultural companies together
with human settlements surrounding the river making the river’s water quality belonging to
microorganisms that may allow the spread of diseases to individuals that are exposed to the river
(Environmental Management Bureau, 2020). Furthermore, if this study does indicate the
presence of antibiotics in the rivers, the probability of mutated coliforms that are antibiotic
resistant may be possible thus, making the transmission of AMR microorganisms inevitable
Detection of total coliforms and fecal coliforms have been widely used as indicator
organisms that assess microbiological quality of potable water (Mishra et al., 2012). Before so,
detecting factors that affect water quality such as the temperature, pH, turbidity, and flow rate is
as important, since these are possible factors that affect the concentrations of these organisms
(Hayat & Kurniatillah, 2021). Temperature, pH, turbidity, and flow rate are few of the many
factors that participate in influencing water quality; however, for the scope of this study, the
factors mentioned are feasible enough to analyze water quality and how it affects possible
detection of antibiotics and presence of total and fecal coliforms. The WHO standard for
coliform bacteria in water is zero total coliform per 100 ml of water and that any water samples
that contain coliforms must undergo investigation for presence of fecal coliforms (Idibie et al.,
2018). In addition, the Philippine National Standards for Drinking Water (PNSDW) set the
standard total coliform count for potable water at <1.1 MPN/100ml (Department of Health,
2017). The pH of water is an important factor in assessing water quality of which standard pH
for potable water by PNSDW ranges between 6.5-8.5 (Department of Health, 2017) wherein any
level that does not fit within the standard pH values may affect the toxicity of microbial poisons
in water (Choudhury et al., 2016). Turbidity is also a primary factor affecting water quality as it
is caused by sediments suspended or dissolved in water that scatter light making the water appear
cloudy which can have a negative impact on aquatic life and water quality. These sediments may
block light to aquatic plants causing potential environmental risk also, and may carry
contaminants and pathogens (Minnesota Pollution Control Agency, 2008). The PNSDW set the
standard turbidity for potable water at <5 NTU (Department of Health, 2017). Flow rate is an
important factor as well in relation to turbidity as the amount of silt and sediment carried by the
stream is affected by the flow rate to which sediments found in quiet, slow-flowing streams settle
fast to the streambed whereas fast-moving streams keep silt suspended in the water column for
longer (Fleming, 2019). Flow rate measurement is detrimental as to how swiftly a volume of
water is able to discharge throughout the stream as rapidly flowing rivers allow for dilution of
water and degradation of wastes and therefore, prevents water pollution (United States
assessing water quality as it affects the biological system of the aquatic environment of which
regulates and controls the type of organisms that live in different water forms wherein an
abundance of species inhabit aquatic environments with cooler temperatures as it contains high
rates of dissolved oxygen (U.S. Geological Survey's Water Science School, 2018).
According to Augustyn et al. (2016), the highest number of coliforms were found in the
fall, followed by a slight decrease in the spring and winter, and a large decrease in the summer.
This contradicts the result of Lee et al. (2013), that showed higher levels of TCs and FCs during
hotter months. Aside from the two studies that contradict each other, another study by Singh et
al. (2017), shows that seasonality and thus, temperature had no significant effect on coliform
count throughout the year. Choudhury et al. (2016), results showed that water temperature ranges
from 23-24 C, which complies to the WHO standard for safe drinking water which is < 32C. The
temperature range observed in this study will slow the pace of chemical and biological processes,
as well as the solubility of gasses in water, which may have a negative influence on the water's
taste and odor at higher temperatures. Aside from temperature, Choudhury et al. (2016) results
showed that pH ranged between 6.8-7.6 for all the sites, which is slightly acidic to slightly
alkaline, which comply with the WHO standard. Augustyn et al. (2016), discussed that coliform
bacteria are gram-negative rods capable of performing the fermentation of lactose to form acidic
products group of microorganisms in water of pH≤7.0 demonstrated in this study resulted from
the fact that optimum pH for the growth of these bacteria is 6-7.
The studies of Lee et al. (2013), Augustyn et al. (2016), Choudhury et al. (2016), and
Singh et al. (2017), showed the correlation between temperature and concentration of coliforms
and fecal coliforms in water samples. Lee et al. (2013) stated that during the high seasonal
temperatures of June–September, total coliforms (TC) were detected at a concentration 1.6 times
higher than the average concentration detected. Furthermore, fecal coliforms (FC) were detected
at a concentration 2.5 times higher than the average concentration detected. Also, water sampled
during July–September exhibited high turbidity, suggesting that the presence of detectable TCs
According to Mishra et al. (2017) coliform count is highest in areas surrounding urban
settlements and sewage discharge areas. The results of the total coliform count exceeded that of
the WHO standard for coliform bacteria in water which is zero per 100 ml to which the results
suggests that the water may potentially be contaminated by fecal coliforms (Mishra et al., 2015;
Choudhury et al., 2016; Idibie et al., 2018). In addition to that, similar studies conducted by
Singh et al. (2017) and Hayat & Kurniatillah (2021) with regards to coliform pollution showed
that coliform contamination has escalated significantly and that water is neither potable and can
be used for recreational purposes. With large amounts of total coliforms present in bodies of
water, the study conducted by Divya & Solomon (2016) revealed that the increase of bacterial
count can indicate the presence of pathogens in water, which can affect the water quality in the
future.
celebration of the World Water Day, Interface Development Interventions (IDIS), together with
the environmental volunteers of Bantayo Aweg and Bantay Bukid monitored the waters of
MPN/100ml, which is far from the standard set by the PNSDW which is 1.1 MPN/100ml. In
addition, it was also stated that the pH level is at 7 in its neutral range however, continuous
monitoring is needed since results may vary (Llemit, 2019). In 2020, IDIS executive director
Chinkie Peliño-Golle stated that the Tamugan watershed lowered its water quality level from
Class AA to Class A, according to the results of a water quality assessment presented by the
Bantayo Aweg, a group of volunteer researchers. However, she also stated that the water in the
river remained potable. Golle also stated that the Panigan-Tamugan watershed is found to be
polluted with plastic wrappers and residential wastes, and traces of nitrate and phosphate from
fertilizers used in plantations surrounding the area (Gumba, 2020). On the other hand, the
Environmental Management Bureau (2020) presented Talomo river’s water quality data to which
physicochemical parameters suggested that the river’s water quality belonged to “Class B” as
primary parameters such as pH, and temperature passed the assessment wherein the river’s pH
level ranged from 7.1-8.2, and its temperature ranged from 23-29°C. However, physiological
parameters such as turbidity (in some areas throughout the river), and fecal coliform rates failed
in the assessment having 6-217ntu, and 135-67005MPN/100mL, respectively. Rivers that belong
to “Class B” are not potable but are manageable for recreational use such as swimming or
Antibiotics are natural or semi-synthetic compound, that when administered, are partially
metabolized in the body and the rest are excreted unchanged or as metabolite into the ecosystem
(Coman et al., 2017; Carmona-Alvarado et al., 2022). Particularly, antibiotics (as residues) are
pharmaceutical contaminants with the highest use worldwide (Alvarado et al., 2022). The main
sources of antibiotic pollution come from industrial production, hospitals, domestic use and the
excretion of human and animal waste (Coman et al., 2017; Hussain et al., 2016). Unlike human
waste, which is treated via treatment plants or septic systems, livestock waste is oftentimes
directly applied to the land as part of a nutrient management plan. Note that land application of
manure is the main pathway for veterinary antibiotic introduction into the terrestrial and aquatic
environments. Once applied to the land, antibiotics are transported to surface water, via runoff, or
ground waters, through infiltration. Unfortunately, large amounts of administered antibiotics are
not metabolized by animals but instead are excreted in manure (Qualls et al., 2017).
The broad use of pharmaceutical compounds for treatments of diseases can have a
negative impact in human health since its occurrence can lead to the development of antibiotic
resistant bacteria (Hussain et al., 2016; Carmona-Alvarado et al., 2022). It is a basic human
tendency to alleviate infectious diseases with the help of medication such as antibiotics or
antibacterial agents in order for the human race to survive and prevent the spread of deadly
diseases within their system, and the environment. However, as long as coexisting species
continue to compete for survival, adaptation and natural selection will aid in developing
phenotypic or genotypic enhancements to their offspring in order for species to gain reproductive
advantage, a phenomenon known as evolutionary arms race (Morand, 2019). This would imply
how certain microorganisms are able to recuperate from antimicrobial agents, which is due to
genetic mutations and horizontal gene transfer that enables pathogenic microbes to resist
antimicrobial agents as the introduction of antibiotics to prevent bacterial infections enforced the
biological fitness of bacteria making them resistant to antibiotics (Kaplan, 2014). Additionally,
the release of antibiotics into the natural water would cause potential environmental risk,
affecting the evolution of the community structure (Coman et al., 2017; Carmona-Alvarado et al.,
2022). Different studies showed that antibiotics are persistent and pseudo-persistent
contaminants causing toxicological impacts on the fauna of natural water bodies including
7 studies had detected the presence of antibiotics in river waters using the HPLC method.
trimethoprim, erythromycin and roxithromycin) which revealed that the river water in Hong
Kong has a wide distribution of antibiotics and has different concentrations from different areas.
environments, including wastewaters, surface water, ground water, and drinking water.
Specifically, they were found in higher quantities on surface water of rivers near urban
settlements. Coman et al. (2017) looked for the presence of antibiotics that are often used in
human and veterinary applications (penicillin, tetracyclines, and cephalosporins). The results
demonstrate that tetracycline and doxycycline were the most abundant antibiotics in river waters,
indicating that antibiotics in river waters are becoming a rising environmental concern,
trimethoprim and cephalosporins). Results show that trimethoprim and quinolones showed
maximum excitation. It was indicated that the concentration and type of antibiotics may be
influenced by several key factors, such as source of sample, season of the year, prevalence of
diseases, as well as factories located in the vicinity or aquaculture activities. Mirzaei et al. (2017)
monitored the presence of nine antibiotics from different classes: β-lactam (amoxicillin and
results show that 7 out of 9 antibiotics are present (Penicillin, Amoxicillin, Azithromycin,
Cephalexin, Ciprofloxacin, Erythromycin, Cefixime). The results also indicated that none of the
antibiotics were present in treated and ground water. Ma et al. (2018) results show that 7 out of 7
antibiotics tested were found and that among the antibiotic families, Tetracycline is the
predominant antibiotic. Correlative analysis showed that there was a positive correlation between
the quantity of many drug-resistant bacteria and the corresponding concentration of antibiotics.
The results show that five antibiotics were found in all samples. Levofloxacin and
oxytetracycline were found to be highest in concentration. The low presence of amoxicillin was
detected giving an unusual result due to fragility of the lactam ring and susceptibility to
hydrolysis in the environment. However, the presence of the antibiotic in the waste streams and
surface water could be explained if there is a large load of the antibiotic entering the wastewater
treatment plant (WWTP) (Harrower, et al., 2021). The presence of antibiotics may be affected by
certain factors; photolysis, temperature, pH, dilution variables, bacterial populations, hydraulic
residence duration (Liu, et al., 2021) and weather conditions, such as acid rain, could promote
This section involves definitions of the unfamiliar terms that will be mentioned in
Antibiotics - Are medically used chemicals, which can affect the river’s antibiotic
resistance.
Coliforms - Are water quality indicators in rivers which determine when water is
Acronyms
HPLC
HPLC-DAD
MPN
METHODOLOGY
Presented in this section is the methodology that will be used to conduct this study
including the research design, setting, research sampling, data gathering procedure, and data
analysis.
Research Design
This study will be utilizing the quantitative descriptive method. The researchers will be
event based on an observation, or the correlation that is explored between two or more events
(Williams, 2007).
Setting
Samples were collected from the Panigan, Tamugan, and Talomo rivers, Calinan, Davao
City (Figure 1b). The Panigan-Tamugan watershed shields the upper catchment basin of Panigan
River and Tamugan River which is a larger river downstream into Panigan. The rivers are
lumped with other two watersheds that balance the Davao River water basin. In
that 72.6% of households have sanitary toilets while Tambobong, its nearby barangay, showed
7% of households that use unsanitary toilets. The difference is that almost half of the households
in Lacson and Tawan-tawan use unsafe toilet sanitation which could then contribute to the
pollution into the watershed. One factor to the contribution of pollution in the watershed is the
banana plantation. A 2007 study showed that the rain leaked into waterways within
farms were suspected as major sources of pollutants within watersheds (Ibanez, 2015). In the
report of Compio (2021), Antipolo, Talomo River is located at the back of Calinan Public
Figure 1. Map of Davao City, Philippines (Panigan-Tamugan River & Antipolo, Talomo
River)
The collection site was visited on the morning of March 12, 2022. Two samples were
collected on each river. One for total coliform and fecal coliform test, and another for HPLC.
During our site visit, four 1L bottles (2 bottles per collection site) were used to collect samples
for total coliform and fecal coliform test, and HPLC. Three sample tubes were used to collect
samples for the turbidity test, one for each river. Parameters were also measured during this
period such as flow rate, turbidity, pH, and temperature. Flow rate was measured using a flow
meter. The turbidity was measured using a turbidimeter. pH was measured using a pH meter.
Microbial Analysis
The samples collected during the visit were directly transported to the Davao Medical
School Foundation Inc. (DMSFI) Research Center for laboratory analysis. Samples were
analyzed for the presence of coliforms and fecal coliforms by Most Probable Number (MPN)
performed by the laboratory technicians. The testing of bottled drinking water was done in an
aseptic manner. The MPN Method was carried out in three steps: 1) Presumptive test 2)
1) Presumptive test
In this examination, for the presence of the indicator bromocresol purple, MacConkey
broth is widely employed for lactose fermentation. The inverted Durham's tube is used to detect
Gram negative coliform bacteria that produce gas. It's safe to assume that coliform bacteria are
present in these samples because the media turns yellow and gas is collected in Durham's tube.
Each of the 10ml of presumptive broth was inoculated with 5 of the 10ml of water samples
(double strength). In a tube containing 50ml of presumptive broth, 1 of 50ml water sample was
added. After a 48-hour incubation period at 37°C, the number of positive tubes from each set was
counted and compared to a standard chart to determine a presumptive coliform count per 100mL
of water.
2) Confirmatory test
Positive samples from the presumptive test were chosen for the confirmed test to evaluate
whether the coliforms were of fecal origin indicator bacterium Escherichia coli. The
development of a greenish metallic sheen on Eosine Methylene Blue (EMB) media was used to
distinguish Escherichia coli from Gram negative coliform bacteria, confirming the presence of
indicator bacteria E. coli. coli. After 24 hours of incubation at 37°C, streaking loopful samples
from positive tubes reveals the formation of color indications from colonies.
3) Completed test
The bacterial colonies on EMB media from verified tests were subcultured on Mac
Conkey agar plate and inoculated in LB broth at 44.5oC with Durham's tube. The production of
gas and color changes in media confirm the presence of the fecal indicator E.coli.
The samples were also used to analyze the presence of Amoxicillin and Penicillin using
laboratory technicians in the laboratory. The HPLC-DAD method has long been the most
extensively used method for determining antibiotics. Because of its simplicity and robustness,
high-performance liquid chromatography with diode array detector (HPLC/DAD) after solid
phase extraction (SPE) (Ašperger et al, 2009) which is based on the separation of analytes
between a solid phase, which is usually a sorbent contained in a column, and a liquid phase,
which is usually a sample matrix or a solvent containing analytes (Ötles & Kartal, 2016). Before
method for quick, selective sample preparation and purification, prior to chromatographic
analysis. This entails distributing the analyte between a liquid phase sample medium and a solid
phase adsorbent, and dispersing dissolved species between two phases. This technique allows the
enrichment and purification of the analytes from a liquid sample by extracting, partitioning, and
adsorbing onto a solid stationary phase (Keçili et al., 2020). In order to improve the extraction
processes and the quality of the extracted data, a standard combination containing that was
created for qualitative and quantitative examination (Figure 2). Commercial powders for oral
therapy and vials were employed as antibiotic standards specifically, Amoxicillin (500 mg oral
powder) and Penicillin (600 mg vials). For calibration, standard solutions in the concentration
range of 0.65 to 166.7 ng/mL were generated by diluting standard mixture in Milli-Q water. An
HPLC Agilent 1200 Series equipment was used for the chromatographic studies. G1322A
degasser, G1311A quaternary pump, and G1329A quaternary pump. The autosampler, G1315D
DAD detector, and G1316B TCC SL column thermostat were used, as well as an LC-MS system
model Agilent 1200 Series coupled with a 6110 Quadrupole LC/MS detector with AP-ESI
ionization and an LC-MS system model Agilent 1200 Series coupled with a 6110 Quadrupole
LC/MS detector with AP-ESI ionization. ChemStation software was used to gather and process
the chromatographic data. The separation was carried out at a specific flow rate on an Agilent
Poroshell 120 EC-C18 column with a mobile phase consisting of acetonitrile and formic acid in
water under the following gradient. A single wavelength of 194 nm was applied for DAD
detection for penicillin and amoxicillin. The target antibiotics were isolated from the water
samples by solid phase extraction. A 1 L river of water sample was run through the SPE system.
5 mL/min flow rate through cartridges, followed by elimination of residual antibiotics with a 5
mL phosphoric acid + acetonitrile (1:1, v/v) combination. The residue was dissolved in 1 mL
acetonitrile and submitted to HPLC analysis after being evaporated to dryness under nitrogen.
Results of the HPLC to detect antibiotics, and total and fecal coliform test on water
samples from the Panigan-Tamugan and Talomo Rivers are presented in this section. Table 1
shows the total coliform and fecal coliform count of the rivers. Talomo River has the highest
presence of coliform containing 1,071 MPN/100ml, followed by Panigan River with 403
MPN/100ml, and Tamugan River with 170 MPN/100ml. Fecal coliform tests also show that fecal
coliforms were present and abundant. Panigan River had the highest presence of coliform of 201
MPN/100ml, followed by Talomo River with 172 MPN/100ml, and Tamugan River with 170
MPN/100ml. Regardless of the difference in results, the results indicate that all rivers are
contaminated with high amounts of coliforms and fecal coliforms. Also, the coliform count far
out exceeded the 0 MPN/100ml set by WHO for potable water and the fecal coliform count far
out exceeded the 1.1 MPN/100ml set by the PNSDW for potable water (Idibie et al., 2018).
from 2019, during the water monitoring by the Interface Development Interventions (IDIS),
together with the environmental volunteers of Bantayo Aweg and Bantay Bukid in celebration of
the World Water Day, in which results indicate a high presence of fecal coliform of 160,000
MPN/100ml (Llemit, 2019). Furthermore, there is a large decrease of coliform count in Talomo
river from 2020, during the water quality assessment of the Environmental Management Bureau
(2020). In this assessment, physicochemical parameters suggested that the river’s water quality
belonged to “Class B”, and fecal coliform rates failed in the assessment having
The significant decrease is presumably due to many different programs carried out by the
government and non-government organizations focused on helping clean and preserve the waters
of Panigan-Tamugan River such as the Upscaling Community Action and Response (UCARE)
project in 2011 by the Interfacing Development Interventions for Sustainability (IDIS) and
Foundation for the Philippine Environment (FPE) recently in 2020. This project led to the
development of the Bantay Bukid Program (BBP), implementing the Davao City Watershed
Code (DCWD), which was later recognized by the city government the following year.
Following the implementation of the program, Bantay Bukid volunteers have apprehended
people violating the code. Violations include improper waste disposal, illegal quarry operations,
illegal poultry farming, illegal fishing ang climbing/trekking at Mt. Tipolog (Foundation for the
Philippine Environment, 2020) in which forest rangers will immediately report to the police if
law violators are witnessed or when they harm the environment (City Government of Davao.,
2019). This group has also organized a monthly water quality monitoring in Panigan-Tamugan
and Talomo Rivers to ensure that the DCWD has been implemented in the rivers (SunStar,
2018). Thus, these results suggest that the programs carried out by these organizations have been
effective.
Table 1. MPN of Panigan River (PR), Talomo River (TL), and TamuganRiver (TM).
Total Fecal
Solid-phase extraction and HPLC-DAD were used to analyze the accuracy for detection
of amoxicillin and penicillin in Talomo River, and Panigan-Tamugan river in which samples
were ran through the same type of column (C18) and solvent system (Gradient elution
Acetonitrile: 0.1% Phosphoric Acid). The test was limited to assessing Penicillin and
Amoxicillin as these antibiotics are commonly used in the Philippines (Barber, 2016). To assess
the presence of antibiotics with regards to the results shown by the HPLC chromatogram,
indication that results are positive should show that retention time of antibiotic samples in
comparison to the water samples should be the exact same otherwise, a difference in retention
time will indicate that there are no antibiotics found in the watersheds.
The HPLC test of both standard samples (Amoxicillin and Penicillin) as shown in figures
3.1 and figure 3.2 had a clear resolution of wavelengths at 194 and 190 nmu, respectively. With
regards to their presence in the water samples collected from the river, the detection of
antibiotics can be seen through the comparison of retention times from the water samples. Figure
3.1 shows the comparison between the standardized sample (Amoxicillin) and the water sample
from the rivers to which the data signifies that there is no presence of amoxicillin in the rivers as
there is a significant difference in their retention time to which the water sample has a peak of
2.387 while the standard Amoxicillin has a retention time of 2.797. Similar results show for the
detection of Penicillin to which Figure 3.2 shows that there is no presence of Penicillin detected
as seen in the difference of retention time to which the water sample has a retention time of
Figure 3.1. The standardized sample and water sample data results of Amoxicillin
Figure 3.2 The standardized sample and water sample and data result of Penicillin
Table 2.1. Peak table for standard sample and water sample for Amoxicillin
Water Sample
Amoxicillin Sample
Table 2.2. Peak table for standard sample and water sample for Penicillin
Penicillin Sample
Water Sample
Physicochemical Parameters
In order to assess the quality of the rivers, average flow rate, turbidity, pH levels, and
temperature were noted down as these parameters may affect the quality of the watersheds. Table
1 shows the physicochemical parameters from the three sampling sites of which Talomo River
exhibits the highest average flow rate at 6.6 lpm, followed by Panigan River at 2.43 lpm and
Tamugan River at 0.24 lpm. The Panigan River has the highest turbidity at 20.4 ntu, followed by
Tamugan river at 18.4 ntu, and Talomo river at only 4.2 ntu. The Panigan and Tamugan Rivers
exceeded the standard turbidity set by the Philippine National Standard for Drinking Water
(PNSDW) for potable water which is <5 ntu whereas the Talomo River is within the standard
suspended or dissolved in water that scatter light making the water appear cloudy which can
The turbidity in Talomo watershed lowered significantly, during the water quality
assessment of the Environmental Management Bureau (2020), ranging from 6-217 ntu
throughout the river, to a turbidity of 4.2 ntu. High turbidity may indicate high presence of
coliform bacteria, as these sediments may carry contaminants and pathogens (Minnesota
Pollution Control Agency, 2008; Lee et al.,n 2013 ), suggesting that the decrease in turbidity is
correlated to the decrease of total coliform count. In addition, the flow rate of the river may
affect turbidity as it affects the dilution of the water and the degradation of wastes (Fleming,
2019), which would suggest why the total coliform and fecal coliform results of Talomo river
lessened throughout the years alongside monitoring and management activities done by the
In contrast, however, results from the Panigan and Tamugan rivers suggest otherwise.
The Panigan and Tamugan rivers exhibit high turbidity with lower coliform count. Whereas the
Talomo river exhibits lower turbidity with higher coliform count which counter the connection of
flow rate and turbidity with respect to presence of total coliform and fecal coliform. The high
turbidity of Panigan and Tamugan Rivers is due to the fact that the area where the samples were
taken is shallow thus, it is closer to the stream bed and that it is a fast flowing water. Turbidity
increases as depth decreases (Faafeng & Mjelde, 1984) and the amount of silt and sediment
carried by the stream is also affected by the flow rate. Sediments found in quiet, slow-flowing
streams settle fast to the streambed. Fast-moving streams on the other hand keep silt suspended
in the water column for longer (United States Environmental Protection Agency). Also, Despite
the fact that the Talomo River exhibits the highest coliform count and flow rate, it exhibits the
lowest turbidity presumably due to our samples being taken in a shallow but concrete area of the
All rivers have a pH level of 7 which is the neutral pH level and within the pH range for
potable water set by the PNSDW which is 6.5-8.5 (Department of Health, 2017). The
temperature of all rivers are within the same range (Talomo-25.8°C, Panigan-23.1°C, and
Tamugan-22.6°C) which also complies with the WHO standard for potable water which is
<32°C. With regards to these informations, the pH observed is within the optimal range for the
growth of coliform bacteria (6-7) as they are gram-negative rods capable of performing the
(Augustyn et al., 2016). In contrast, the temperature range observed in this study will slow the
pace of chemical and biological processes, as well as the solubility of gasses in water, which may
have a negative influence on the water's taste and odor at higher temperatures (Choudhury et al.,
2016). This indicates the temperature range measured in this study alleviates the presence of
coliforms. Furthermore, with these contrasting parameters, this would indicate that coliforms are
within their natural habitat since coliforms are already naturally present in the environment and
as a result of contamination, possibly from human and animal wastes as the source of pathogenic
microorganisms (Divya & Solomon, 2016), to which the results show the presence of high levels
of fecal coliforms. Similarly, Gerba & Pepper (2019) also mentioned that high coliform count
contaminating the waterways, may indicate the presence of various pathogenic microorganisms
that may spread via food and water consumption, and bathing or recreational use, creating a
cyclic transmission of diseases. All three rivers are available for anyone to use and with results
of high total and fecal coliform counts, this remains a concern for water quality of the rivers
The pH and temperature of Talomo watershed has remained in its neutral range since
2020, in which the past assessment shows pH level ranged from 7.1-8.2, and temperature ranged
from 23-29°C.
2.68 lpm
0.25 lpm
6.78 lpm
Conclusion
The abundance of total coliform count in watersheds is a growing concern as it may
allow for the presence of pathogenic microorganisms that may spread and infect individuals
exposed to the river. This study provided an updated water quality assessment with regards to the
presence of total and fecal coliforms by MPN method and a first ever information regarding the
detection of antibiotics (Amoxicillin and Penicillin) using the HPLC-DAD method using water
samples collected from three of Davao’s major rivers, Talomo, Panigan, and Tamugan. In
conclusion, results of the MPN showed that there is an abundance of total and fecal coliform to
which all three rivers have failed the standard coliform count set by PNSW (<1MPN/100mL).
However, more monitoring efforts can be done as the data presented in this paper only
represented one sampling duration. Further studies can be undertaken in order to profile the
physicochemical parameters of the river and their coliform count in order to produce substantial
data that can be used by agencies involved in crafting management policies in maintaining the
antibiotics present in all three rivers, detecting Amoxicillin and Penicillin The researchers
suggest continuing on assessing the rivers for the detection of different types of antibiotics as
trends on studies do show the presence of antibiotics aside from Penicillin and Amoxicillin in
water forms. Furthermore, this study also suggests continuing an overall annual water quality
assessment of all the three but not limited to the three rivers especially since Tamugan river is
Recommendations
After a thorough analysis of data, the researchers have come to recommend situations to
inspire future researchers. Continuation of water assessment between Panigan, Tamugan, and
Talomo rivers to provide the public important information on the status of these waterways and
help the people for management actions. Since the study was only limited to detecting two
standard antibiotics which is Amoxicillin, and Penicillin, it is great for future researchers to
identify other varieties of antibiotics present in between Panigan, Tamugan, and Talomo Rivers.
With the lack of resources, and budget, funding future researchers who are interested in the
rivers for better and more resources, and budget for a wider field of study. Even with the
existence of the city ordinance in Davao City, many people still abide by the laws and this proves
the coliform counts that exist in the researchers data. Stricter implementation of city ordinance
to avoid further contamination between Panigan, Tamugan, and Talomo Rivers, would be great
for the public to follow the rules. Since, the study has not been made for the public to the citizens
of the barangay, it is great to utilize publication to the people, within the area for them to be
informed about the water quality as well as delivering data results to the barangay for them to be
informed about the current quality, to help, and for future government programs. Considering
different seasons occur, the waterways are constantly changing, suggesting future researchers to
gather data on different seasons, and submitting it to barangay, would be a great contribution to
the study, for getting better accurate results for the water quality.
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