Sharath 04 (Biochemistry MOSCOW)
Sharath 04 (Biochemistry MOSCOW)
Sharath 04 (Biochemistry MOSCOW)
1
Department of Studies and Research in Biochemistry and Centre for Bioscience and Innovation,
Tumkur University, 572103 Tumkur, India
2
Department of Medicinal Biochemistry and Microbiology (IMBM), Uppsala Biomedical Centre, 75237 Uppsala, Sweden
3
Department of Biochemistry and Molecular Biology, School of Life Sciences,
Pondicherry University, 605014 Pondicherry, Tamil Nadu, India
a
email: sdevbiochem@gmail.com
Received March 21, 2020
Revised May 26, 2020
Accepted May 29, 2020
Abstract—In this study, we purified and characterized flaxseed cysteine protease (FSCP) with strong anticoagulant,
antiplatelet, and clotdissolving properties. The enzyme was purified to homogeneity by a combination of gel permeation
and ionexchange column chromatography techniques. The purity of the enzyme was evaluated by SDSPAGE, RPHPLC,
and MALDITOF. FSCP was observed as a single band of approximately 160 kDa in SDSPAGE under reducing and non
reducing conditions. The exact molecular mass of FSCP was found to be 168 kDa by MALDITOF spectrometry. The CD
spectra of FSCP revealed the presence of 25.6% helices, 25.8% turns, and 48% random coils with no betasheet structures.
FSCP hydrolyzed both casein and gelatin with a specific activity of 3.5 and 4.2 unit/mg min respectively. The proteolytic
activity of FSCP was completely abolished by iodoacetic acid (IAA), suggesting FSCP is a cysteine protease. The pH opti
mum for the proteolytic activity of FSCP was pH 6.0; the temperature optimum was 30°C. FSCP exhibited strong antico
agulant effect in both plateletrich plasma (PRP) and plateletpoor plasma (PPP) by extending the clotting time from 222
to 1100 s and from 256 to 1210 s, respectively. FSCP degraded human fibrinogen and fibrin clots. The products of fibrino
gen degradation by thrombin and FSCP were different. Furthermore, FSCP inhibited aggregation of washed platelets trig
gered by ADP, epinephrine, thrombin, collagen, arachidonic acid, and platelet activating factor (PAF). FSCP was found to
be nontoxic as it did not damage the membrane of red blood cells (RBCs) and did not induce hemorrhage and edema in
experimental mice.
DOI: 10.1134/S0006297920090102
1113
1114 NANDISH et al.
ulant effect and degrading fibrinogen from the Ctermi grade. Fresh human blood for plateletrich plasma (PRP)
nus (generating truncated fibrinogen that lacks a potential and plateletpoor plasma (PPP) was collected from
for polymerization) are either protein C activators or fac healthy donors. All experiments were conducted in
tor IX and X inhibitors [6]. Proteases interfering with the accordance with the ethical guidelines and approved by
platelet function can act as either activators or inhibitors the Institutional Human Ethical Committee (IHEC
of platelet aggregation [7]. Fibrinogenolytic enzymes UOM No. 47Res/201415), University of Mysore,
reported so far activate plasminogen and cause hemor Mysuru, India. Animal experiments were approved by the
rhage in experimental animals [8]. Metalloproteases and Institutional Animal Ethical Committee (UOM/IAEC/
serine proteases with fibrinogenolytic, fibrinolytic, 02/2016), University of Mysore. Animals were handled in
antiplatelet, and pro and anticoagulant properties from accordance with the guidelines of the Committee for the
the viper and crotalid snake venoms have been compre Purpose of Monitoring and Supervision of Experiments
hensively studied [9], while animal cysteine proteases on Animals (CPCSEA).
remain the least explored. On the other hand, several Preparation of flaxseed extract and protein assay.
research groups have documented the presence of cys Flaxseeds were purchased from a local market in Tumkur.
teine proteases in the latex of plants such as Asclepius The seeds were washed with doubledistilled water and
curassavica, Pergularia extensa, Calotropis gigantean, treated with 0.5 M NaHCO3 (1 : 8 w/v) with constant
Synadenium grantii, and Wrightia tinctoria [10]. Crude stirring for 1 hr. The mucilage was then removed by filtra
latex was found to interfere with hemostasis by exhibiting tion through a muslin cloth. The seeds were washed thor
procoagulant, clotinducing, or clotdissolving proper oughly, dried at room temperature for 24 h, and ground
ties. Thus, fucin, a cysteine protease from Ficus carica, into powder that was resuspended in 50 mM TrisHCl
activates coagulation factor X and induces clot formation buffer (pH 7.6) and centrifuged at 8000g for 15 min. The
[11]. Papain from the latex of Carica papaya was the first supernatant was frozen at –20°C until further use. Protein
characterized cysteine protease [12]. However, cysteine concentration was determined by the Bradford method
proteases from edible seeds are less studied. Recently, a [14] using BSA as a standard.
cysteine protease from the flaxseed extract and its antico Sephadex G100 chromatography. Sephadex G100
agulant, antiplatelet, and clotdissolving activities have column (1.0 × 62 cm) was preequilibrated with 0.1 N
been reported in [13]. Enzyme purification and charac NaCl. Flaxseed extract (100 mg in 1 ml of 0.1 M NaCl)
terization is very important for understanding the struc was loaded on the column; the fractions were eluted with
turefunction relationships in the enzyme and predicting 0.1 M NaCl at a flow rate of 0.25 ml/min; protein elution
its possible applications. The key goal behind purification was monitored at 280 nm. Every other tube was assayed for
is to achieve the maximum yield of the enzyme prepara the proteolytic activity from absorbance at 660 nm using
tion with the highest catalytic activity. Moreover, enzyme fatfree casein as a substrate. Fractions with the proteolyt
characterization provides an integrated insight in the ic activity were lyophilized and used in further assays.
allosteric effects and possibilities of protein engineering DEAESephadex A25 chromatography. The peak II
and novel drug design. In view of this, we purified and obtained by gel filtration on Sephadex G100 (20 mg in
characterized a cysteine protease from the flaxseed 1 ml of equilibrating buffer) was loaded on a DEAE
extract. Sephadex A25 column (1.0 × 15 cm) preequilibrated
with 10 mM TrisHCl buffer (pH 7.5). The proteins were
eluted stepwise with 20 mM TrisHCl (pH 9), 20 mM
MATERIALS AND METHODS TrisHCl (pH 8.5), 30 mM TrisHCl (pH 8.0), 40 mM
TrisHCl (pH 7.5), 50 mM TrisHCl pH 7.0, 75 mM Tris
Fatfree casein, gelatin, phenylmethylsulfonyl fluo HCl (pH 6.5), 100 mM TrisHCl (pH 6.0), 0.5 M NaCl
ride (PMSF), ethylenediaminetetraacetic acid (EDTA), in 50 mM TrisHCl (pH 7.5), and 1 M NaCl in 50 mM
iodoacetic acid (IAA), adenosine diphosphate (ADP), TrisHCl (pH 7.5) at 0.25 ml/min; elution was monitored
epinephrine, thrombin, arachidonic acid, platelet activat at 280 nm. The obtained fractions were assayed for the
ing factor (PAF), collagen, Sephadex G100, diethyl proteolytic activity at 660 nm using casein as a substrate.
amino ethyl (DEAE)Sephadex, human plasma fibrino Reversedphase highperformance liquid chromatog
gen, and 1,10phenanthroline were purchased from raphy (RPHPLC). The purified protease from DEAE
Sigma, USA. Molecular weight markers were from Sephadex chromatography was subjected to RPHPLC
Bangalore Genie Pvt Ltd., India. Reagents for determin on a C18 column (150 mm × 4.60 mm; particle size, 5 μm)
ing activated partial thromboplastin time (APTT) preequilibrated with 0.1% trifluoroacetic acid (TFA) in
(LIQUICELINE Phospholipids preparation derived water using a Shimadzu LC20AD Prominence HPLC
from rabbit brain with ellagic acid) and prothrombin time system equipped with a PDA detector (Japan) The pro
(PT) (UNIPLASTIN rabbit brain thromboplastin) were teins were eluted with a linear gradient (0 to 100%) ace
purchased from AGAPPE Diagnostic Pvt Ltd., tonitrile, 0.1% TFA for 40 min at a flow rate of 1 ml/min.
Ernakulum, India. All other chemicals were of analytical Protein elution was monitored at 280 nm.
Fig. 1. a) Sephadex G100 column chromatography. Flaxseed extract (100 mg in 1 ml of 0.1 M NaCl) was loaded on the column (1.5 ×
108 cm) preequilibrated with 0.1 M NaCl. The proteins were eluted with 0.1 M NaCl at a flow rate of 16 ml/h; elution was monitored at
280 nm. Every other protein fraction (1.6ml) was assayed for the proteolytic activity using casein as a substrate. b) DEAESephadex chro
matography. Peak II obtained from the previous step (20 mg in 1 ml of equilibrating buffer) was loaded on the column (1.5 × 20 cm) preequil
ibrated with 10 mM TrisHCl (pH 8). The proteins were then eluted stepwise (see “Materials and Methods” Section) at a flow rate of 15 ml/h;
elution was monitored at 280 nm. Every other protein fraction was assayed for the proteolytic activity using casein as a substrate.
a b
c d
Fig. 2. a) Electrophoresis of FSCP in 10% SDSPAG; lanes: 1) flaxseed extract (100 μg), nonreducing conditions; 2) FSCP (50 μg) under
nonreducing and (3) reducing conditions. b) PAS staining of (1) FSCP (50 μg) and (2) fibrinogen (50 μg, positive control); M, molecular
weight marker, kDa: myosin Hchain (200), βgalactosidase (120), bovine serum albumin (66), ovalbumin (43), carbonic anhydrase (29), and
lysozyme (14.3). c) MALDITOF mass spectrometry of FSCP (5 μg) in the positive ionization mode using αcyano4hydroxycinnamic acid
as a matrix. d) RPHPLC of FSCP (5 μg) on a C18 column preequilibrated with 0.1% TFA in water. The protein was eluted with an increas
ing concentration (0100%, 40 min) of acetonitrile, 0.1% TFA at a flow rate of 1 ml/min; elution was monitored at 280 nm. (Color versions
of Figs. 24, 6 and 8 are available in online version of the article and can be accessed at: https://www.springer.com/journal/10541)
FSCP was found to be a monomer, as it traveled as a The CD spectra of FSCP revealed approximately
single band with an approximate molecular mass of 25.6% helices, 25.8% turns, and 48% random coils, as
160 kDa upon SDSPAGE under both reducing and non well as the lack of betasheets, in the enzyme’s secondary
reducing conditions (Fig. 2a). However, the exact molec structure (Fig. 3a).
ular mass of FSCP determined by MALDITOF mass The extent of FSCP purification was 19fold (Table
spectrometry was 16 kDa (Fig. 2c). FSCP did not form 2). The hydrolytic activity of FSCP against casein and
Schiff bases when treated with periodic acid (unlike fib gelatin was confirmed in the zymography experiments.
rinogen), suggesting the absence of carbohydrate moieties FSCP produced transparent bands in approximately 168
(Fig. 2b). The purity of FSCP was confirmed by RPHPL kDa region in the experiments with both casein and gela
that revealed a single sharp peak with a retention time of tin (Fig. 3, b and e, respectively). The pH optimum of
7.2 min (Fig. 2d). FSCP was found to be pH 6.0 and the optimal tempera
Table 2. FSCP purification. The values are means of three independent experiments
Procedure Total protein Protein Specific activity Total Activity Purification,
(mg) recovery (%) (U/min mg protein) activity yield (%) folds
b c d e
f g
Fig. 3. a) CD spectra of FSCP (20 μg in doubledistilled water. b) FSCP zymogram with casein: 5 μg (1) and 10 μg (2) of FSCP. c) FSCP
(5 μg) zymogram with casein in the absence and presence of inhibitors (5 mM); lanes: 1) no inhibitors; 2) PMSF; 3) IAA; 4) 1,10phenan
throline; 5) EDTA. d) FSCP zymogram with gelatin: 5 μg (1) and 10 μg (2) of FSCP. e) FSCP (5 μg) zymogram with gelatin in the absence
and presence of inhibitors (5 mM); lanes: 1) no inhibitors; 2) PMSF; 3) IAA; 4) 1,10phenanthroline; 5) EDTA. f) Effect of pH (39) on the
proteolytic activity of FSCP. g) Effect of temperature (550°C) on the proteolytic activity of FSCP. h) Effect of incubation time (30240 min)
on the proteolytic activity of FSCP.
a b
c d
Fig. 4. a) Effect of FSCP on plasma recalcification time. b) Effect of protease inhibitors on the anticoagulant activity of FSCP. FSCP (4 μg)
was preincubated with 5 mM inhibitor (PMSF, IAA, EDTA, and 1,10phenanthroline) for 15 min at 37°C. c) Effect of FSCP on the tail
bleeding time measured 10 min after intravenous administration of PBS or various doses of FSCP. d) Effect of inhibitors on the tail bleeding
time. FSCP (4 μg) was preincubated with 5 mM IAA for 15 min at 37°C. Each bar represents mean ± SD of three independent experiments
(p < 0.01).
FSCP degrades fibrinogen from the Cterminus. To peaks with the retention times of 1, 1.2, 1.4, 1.6, and
identify the site(s) of fibrinogen hydrolysis by FSCP, we 2 min, respectively (Fig. 7b). Although fibrinogen treat
compared the products of fibrinogen degradation by ment with FSCP also generated five peaks, their retention
thrombin and FSCP using HPLC. Fibrinogen was eluted times were 1, 1.4, 1.6, 1.8, and 2 min, respectively
as a major single peak with a retention time of 1.3 min (Fig. 7c). The elution profiles for the fibrinogen frag
(Fig. 7a). Fibrinogen cleavage with thrombin yielded five ments generated with thrombin and FSCP were different,
Table 3. Dose dependent effect of FSCP on the clotting time of normal human plasma
a b
c d
Fig. 5. Fibrinogenolytic activity of FSCP. a) Fibrinogen (50 μg) hydrolysis for 4 h at 37°C (1) in the absence of the enzyme and in the pres
ence of (2) 2 μg, (3) 4 μg, (4) 6 μg, (5) 8 μg, and (6) 10 μg of FSCP. The hydrolysis products were separated by 10% SDSPAGE under reduc
ing condition. b) Fibrinogen hydrolysis (50 μg) by FSCP (4 μg) after incubation for (1) 0 h, (2) 4 h, (3) 8 h, (4) 12 h, (5) 16 h, and (6) 24 h at
37°C. c) Effect of protease inhibitors on the fibrinogenolytic activity of FSCP. FSCP (4 μg) was preincubated with protease inhibitors (5 mM)
for 30 min at 37°C; the reaction was initiated by adding 50 μg of fibrinogen and the reaction mixture was incubated for 4 h: 1) fibrinogen alone
and in the presence of (2) FSCP; (3) FSCP and PMSF, (4) FSCP and IAA, (5) FSCP and EDTA, and (6) FSCP and 1,10phenanthroline.
M, molecular weight markers, kDa. d) Degradation of human plasma proteins. Plasma proteins (100 μg) were incubated (1) in the absence of
the enzyme or in the presence of (2) 2 μg, (3) 4 μg, (4) 6 μg, (5) 8 μg, and (6) 10 μg of FSCP in 40 μl of 10 mM TrisHCl buffer (pH 7.4) at
37°C and then analyzed by 7.5% SDSPAGE under nonreducing condition.
a b
c d
Fig. 6. Fibrinolytic activity of FSCP. a) Colorimetric assay of FSCP fibrinolytic activity. Washed plasma clot was incubated with 010 μg of
FSCP for 2.5 h, and substrate degradation was evaluated from OD660. b) Effect of FSCP amount on the clot hydrolysis. Washed plasma clot
was incubated for 12 h with (1) in the absence of the enzyme and with (2) 2 μg, (3) 4 μg, (4) 6 μg, (5) 8 μg, and (6), and 10 μg (6) of FSCP.
The reaction products were analyzed by SDSPAGE (7.5%). c) Time dependence of clot hydrolysis. Fibrin clot was incubated at 37°C (1) in
the absence of the enzyme or in the presence of FSCP (4 μg) for (2) 0 h, (3) 6 h, (4) 12 h, (5) 18 h, and (6) 24 h (6). d) Inhibition of FSCP
activity. FSCP (4 μg) was preincubated with protease inhibitors (5 mM) for 30 min at 37°C. The reaction was initiated by adding fibrin clot;
the reaction mixture was incubated for 12 h: fibrin clot alone (1) or in the presence of (2) FSCP, (3) FSCP and PMSF, (4) FSCP and IAA, (5)
FSCP and EDTA, and (6) FSCP and with 1,10phenanthroline.
a b
c d
Fig. 7. HPLC of (a) fibrinogen (50 μg) and product of its degradation by (b) human thrombin and (c) FSCP. d, e) SDSPAGE (10%) of the
products of fibrinogen degradation by (d) thrombin and (e) FSCP end products.
a b
c
d
Fig. 8. a) Effect of FSCP (6 μg) on the aggregation washed platelet induced by adenosine diphosphate (10 μM ADP + 50 μg of fibrinogen),
epinephrine (5 μM epinephrine + 50 μg of fibrinogen), thrombin (2 μM), collagen (5 μg), arachidonic acid (50 μM), and platelet activating
factor (2 μM). b) Effect of FSCP on hemolytic activity: FSCP (0100 μg) was preincubated for 30 min with PBStreated packed RBCs.
Percentage of RBC lysis was calculated based on the presence of free haemoglobin in the supernatant and measured at 540 nm. c) Hemorrhagic
activity of FSCP: (cI) saline, (cII) positive control, Daboia russelli venom, (cIII) 25 μg, (cIV) 50 μg, and (cV) 100 μg of FSCP were injected
into mice in a total volume of 50 μl. d) Effect of FSCP on edema induction: positive control, MDH venom (dI); saline (dII); FSCP 50 μg
(dIII) and 100 μg (dIV).
was found to be 168 kDa by MALDITOF mass spec Hemostasis is a physiological phenomenon that plays
trometry. The secondary structure of FSCP is represented a key role in the arrest of bleeding caused by a damage to
by helices, turns, and random coils, but lacks betasheets. blood vessels [31]. It involves intrinsic pathway coagula
FSCP hydrolyzed casein and gelatin with the specific tion factors (factors IXXII), extrinsic pathway coagula
activity of 3.45 and 4.20 unit/min mg protein, respective tion factors (tissue factor and factor VII), and common
ly, at 37°C. The pH optimum for the enzyme is pH 6.0; pathway coagulation factors (factor X, prothrombin,
the temperature optimum is 30°C; the highest degree of thrombin, fibrinogen, fibrin clot, and factor XIII).
substrate hydrolysis was observed at 150 min of reaction. Activation of these factors takes place through the zymo
FSCP lacked the carbohydrate moieties, as it was nega gen activation upon exposure to unusual surfaces and/or
tive for the Schiff base staining. FSCP was inhibited by tissue injury [32]. Anticoagulants generally block specific
IAA and insensitive to metal chelators (EDTA and 1,10 factor(s) of the intrinsic, extrinsic, and/or common coag
phenanthroline) and serine protease inhibitor PMSF, ulation pathways. FSCP showed a strong anticoagulant
suggesting it belongs to cysteine proteases. Seeds are activity both in vitro and in vivo. The APTT test evaluates
known to store remarkably high amounts of proteolytic the activity of the intrinsic pathway factors in the clot for
enzymes, including serine, cysteine, and aspartate pro mation, while the PT test estimates the initiation of clot
teases and metalloproteases [27]. Serine proteases and formation through the extrinsic pathway [33]. FSCP
metalloproteases from plant latex, ticks, earthworms, delayed the clotting time only in the APTT test, but not in
caterpillars, plant seeds, and snake, spider, and honeybee the PT test, suggesting the interference of this enzyme in
venoms have been comprehensively studied [2830], the intrinsic pathway of blood coagulation. However, the
while cysteine proteases remain the least characterized exact site of FSCP action on the intrinsic pathway
enzymes in plant seeds. remains obscure. The anticoagulant effect of FSCP both