Regular Article The Three-Center-Four-Electron (3c-4e) Bond Nature Revisited. An Atoms-In-Molecules Theory (AIM) and ELF Study
Regular Article The Three-Center-Four-Electron (3c-4e) Bond Nature Revisited. An Atoms-In-Molecules Theory (AIM) and ELF Study
Regular Article The Three-Center-Four-Electron (3c-4e) Bond Nature Revisited. An Atoms-In-Molecules Theory (AIM) and ELF Study
DOI 10.1007/s002140000231
Regular article
The three-center-four-electron (3c-4e) bond nature revisited.
An atoms-in-molecules theory (AIM) and ELF study
Jose Molina Molina, Jose A. Dobado
Grupo de ModelizacioÂn y DisenÄo Molecular, Instituto de BiotecnologõÂ a, Campus Fuentenueva s/n, Universidad de Granada,
18071-Granada, Spain, e-mail: dobado@ugr.es; Tel.: +34-958-243186; Fax: +34-958-243186
Received: 1 June 2000 / Accepted: 4 October 2000 / Published online: 19 January 2001
Ó Springer-Verlag 2001
Abstract. Theoretical calculations (B3LYP/6±311+ clear from accurate ab initio calculations that d orbitals
+G**) were performed on a series of formally hyper- do not participate in bonding, but act solely as
valent compounds showing linear three-center geome- polarization functions [1, 5]. The bonding schemes
tries. The bonding nature was analyzed by the electron presented in the literature for hypervalent compounds
density, q(r), and electron-localization function (ELF) arise from dierent analyses of the electronic wave
topologies, including calculations of the AIM charges function, indicating the importance of a rigorous and
and NMR chemical shifts (GIAO method). In addition, observation-based interpretation of the theoretical
a quantitative analysis was also performed of the results [6]. The bonding properties of dierent linear,
localization and delocalization indexes, obtained from three-center hypervalent compounds have been charac-
the electron-pair density in conjunction with the de- terized by the Rundle [7] and Pimentel [8] three-center-
®nition of an atom in a molecule. Furthermore, the four-electron model (3c-4e). The application of this
populations and ¯uctuations in the ELF basins were also model to the [F3]) molecule is depicted in Fig. 1.
evaluated. The compounds studied presented linear (1± A valence bond description of the 3c-4e scheme was
5), T-shaped (6±9), and bipyramidal structures (10±15). performed by Linnett [9]. The 3c-4e model postulates
Our results support the 3c-4e model for the linear (1±5) three MOs, Y1 with bonding nature, Y3 with antibonding,
structures, but reveal for the T-shaped (6±9) structures and Y2 with no bonding character. These three MOs yield
only a small contribution from this model. In addition, an overall bond order of 0.5 with two electrons almost
there is no evidence to support the 3c-4e bond scheme localized on the external ¯uorines with atomic charges of
for the bipyramidal compounds (10±15). )0.5 e). This scheme has also been extended to other
hypervalent molecules such as F3Cl, [F3S]), F4S, F5P,
Key words: Ab initio calculations ± Atoms-in- [F5Si]) or F6S, with dierent trigonal-bipyramid or oc-
molecules ± Bond theory ± Three-center-four-electron tahedral geometries. Furthermore, an explanation of the
bond ± Electron localization function dissimilar ligand equatorial and axial bond lengths to the
central atom is rationalized by these geometrical ar-
rangements. Another point of view in the description of
these hypervalent structures is the Generalized Valence
Bond approach summarized by the democracy principle
1 Introduction proposed by Cooper et al. [10], in which a particular atom
uses any of its valence electrons in the chemical bonding,
The bond nature in hypervalent compounds has long based on the principle of minimizing the total energy.
been controversial, and has been the object of several In recent years, an observation-based interpretative
recent reviews [1, 2]. Special attention has been focused tool has been extensively used, the atoms-in-molecules
on chalcogen oxides [3] and ylides [4]. Historically, the (AIM) theory [11]. In this context, AIM has been used in
bonding nature for these compounds has been based the bonding description of dierent hypervalent com-
on an spxd y hybridization scheme. However, it is now pounds [3,4a,6,12]. A complementary method to study
the chemical bonding is the electron-localization func-
tion (ELF) [13] analysis of Becke and Edgecombe [14].
This work is dedicated to Professor SerafõÂ n Fraga
Moreover, the ELF topological analysis has been
Professor Jose Molina Molina passed away on the 13th June 2000 also used to de®ne chemical bonding including that in
Contribution to the Proceedings of the 2000 Symposium on hypervalent molecules [12].
Chemical Bonding: State of the Art in Conceptual Quantum An appropriate de®nition of bonding indexes is of
Chemistry. great importance for the bonding characterization of
329
where which P(Wi,Wj) is the pair population, and the ¯uctuation contri-
B
1 X
N
1 jrqj2
3 2=3 5=3 X
N bution PijB .
2 2
D ruj ; Dh 3p2 q ; q uj i6j
ij
2 j1
8 q 10 j1
depicted in Table 1. Integration of the density in the F-Cl lengthening ca. 0.4 AÊ compared to 19. The
atomic basins gave the AIM atomic charges. Moreover, negative charge was located mainly on the two
the GIAO method was used to generate the corre- terminal atoms, giving a highly positive hydrogen
sponding isotropic chemical shifts for the dierent atoms atom in 1, and an slightly positive chlorine atom in 3.
(see Figs. 2±4). By contrast, the central atoms for 2 and 5 remained
The following trends are extracted from the geomet- almost neutral. Moreover, for 4 the ¯uorine had
rical parameters and electronic properties. a negative value and was similar to the terminal
chlorines.
1) The linear anionic structures (1±5) lengthened their
2) The T-shaped structures (6±9) (with lone pairs at the
bonds by more than 0.2 AÊ compared to the corre-
central atom) had larger ¯uorine axial bonds than the
sponding reference compounds (16±19). Further-
corresponding equatorial ones (>0.1 AÊ). However,
more, the main dierences appeared in 4 with a
332
the dierences with the reference compounds were bonds, but with notable covalent character in accord
shorter than in the linear structures. with q(r)>0.1 e/ao3 positive Ñ2q(r)>0.35 e/ao5 and neg-
3) The ¯uorine axial/equatorial bond length dierences ative Ed(r) values. Furthermore, the dierences in the
for 10±15 (without lone pairs at the central atom) numerical values for the axial/equatorial bonds were
were very small (<0.08 AÊ). very small.
4) The atomic charges on the Fa and Fe atoms were very The 19F-NMR chemical shifts were calculated to
similar for 7±15; however, the largest dierence was evaluate the dierences in the chemical environment,
found for 7 (0.16 e)). giving the linear structures trends similar to the ref-
erence compounds. Moreover, the T-shaped structures
The nature of the F-X bond has been analyzed,
(6±9) presented sharply dierent axial shifts (dFa)
considering the q(r) topology (see Table 1), yielding the
compared to the equatorial values, the largest dier-
linear structures (1±5) a very polar unstabilized behavior
ences being found for structure 7 and 8 (>100 ppm).
with small q(r) values, positive Ñ2q(r), small k1/k3
The axial/equatorial dierences were due mainly to the
and Ed(r) values close to zero at the BCPs. However,
chemical environment of these compounds, with
structure 1 deviated from these trends due to the strong
equatorial disposition for the central atom lone pairs.
electrostatic interaction between the hydrogen and the
The largest dierences in 7 and 8 are explained by the
two ¯uorines (q(r) 0.170 e/ao3 and Ñ2q(r) )0.29
existence of two lone pairs, in contrast to the only one
e/ao5). The sulfur derivatives enhanced the S-F covalent
for 6 and 9. The axial/equatorial shifts values were
character, giving higher q(r) and negative Ñ2q(r) values.
very similar for the structures without lone pairs on the
In addition, the numerical values matched the geomet-
central atom (10±15), excluding 12 which has another
rical results. The remaining structures with Cl (7), P (11±
two equatorial hydrogens.
13) and Si (14) as the central atom displayed highly polar
333
According to the above-mentioned trends, the struc- nal nuclei should appear in this model. Compounds
tures can be classi®ed in three main groups. One has 10±15 (above-mentioned group 1) with a bipyramidal
structures 10±15 without lone pairs on the central atom, structure, displayed linear F-X-F moiety and a 3c-4e
in which the axial/equatorial ¯uorine bonds had similar bond has been assigned, particularly for 13 (PF5). Com-
behavior for the geometries and electronic properties. pounds 10±14 displayed two dierent bonding schemes
The second group (6±9) has marked dierences in the for the axial/equatorial bonds, with the 3c-4e for the axial
axial/equatorial geometries and electronic properties. ones and three 2c-2e for the equatorial ones. In contrast,
For these structures, the dierences may be due to the the bonding scheme in 15 was previously described in the
axial/equatorial bonding nature or to the electronic en- literature as three 3c-4e bonds with an additional bonding
vironment. In the third group, linear structures 1±5 have MO [2b], resulting in six equivalent F-S bonds. Com-
markedly dierent properties compared to the parent pounds 13 and 14 displayed D3h symmetry with three
compounds (16±19). Among the three groups, the latter equivalents equatorial bonds and two axial ones. The
displayed characteristics compatible with the 3c-4e bond theoretical axial/equatorial bond lengths are similar with
scheme. longer axial distances. Furthermore, as previously men-
For a qualitative as well as quantitative evaluation of tioned, all the geometrical and electronic properties were
the 3c-4e bond, the electron localization and delocal- similar. In addition, the localization and delocalization
ization indexes [21] were calculated, and the numerical indexes for both bonds were equivalent [F(Fa,Fa)=9.21
values are presented in Table 2. In addition, a topolog- and F(Fe,Fe)=9.20 e) for 13]. In general, the delocal-
ical ELF study was also made, including the numerical ization indexes were very similar with larger values for the
populations and ¯uctuations for the dierent basins, to X-Fe bonds. On the other hand, the electron population
evaluate the electronic delocalization for these structures of the ELF valence basins had the same trends
(see Table 3). [V(Si,Fe)=1.24 and V(Si,Fa)=1.18 e) for 14] and the
The Rundle [7] and Pimentel [8] 3c-4e bond model has monosynaptic valence basins at the ¯uorine-atom popu-
a non-bonding Y2 MO with two electrons (see Fig. 1). lations (lone pairs) were also similar and independent of
Therefore, an electron delocalization between the termi- the axial/equatorial nature for 13 and 14. In addition, the
334
overall electronic localization trends for the axial/equa- of this group, in agreement with HaÈser's results based on
torial bonds were highly similar to the parent compounds a one center-expansion technique for the PF5 molecule
(21 and 22). For compounds 13 and 14, non-electron [22d]. The small dierences found between the axial/
delocalization was found between the axial ¯uorines, with equatorial bonds are explained by the dierent chemical
only an axial/equatorial delocalization similar in magni- surroundings for these bonds.
tude to the d(F1,F2) in the parent compounds. The second group of compounds (6±9) displayed
Similar observations resulted analyzing the ¯uctua- dierent T-shaped geometries with lone pairs on the
tion contributions of the ELF valence basins in the V(F) central atom. These structures presented marked dif-
basins (see Table 3), with an extremely small axial-axial ferences in the chemical axial/equatorial properties
contribution (<1%). (bond lengths, charges and chemical shifts), the dier-
Compounds 10 and 15 had sulfur as the central ences in the localization and delocalization for these
atom and the localization characteristic for the ¯uo- structures between the axial/equatorial bonds were now
rine in 15 and both Fa and Fe in 10 had the same not negligible with an increase in the d(Fa,Fa) values
values (ca. 8.9 e)). Analogous behavior was found for from 0.06 in 9 to 0.15 in 7. The V(Fa) basin ¯uctuation
the remaining compounds in this group (11 and 12), contributions from the other axial basins also have
including no electron delocalization between axial larger values than in the former group (ca. 2%). These
atoms. results support a small contribution to these structures
From all the above electronic localization and delo- of the 3c-4e model, due mainly to a slight electron
calization results, we conclude that there is no evidence delocalization between the axial ¯uorine atoms. How-
to support the 3c-4e model in the Fa-X-Fa substructure ever, the dierent behavior of the axial/equatorial atoms
335
Table 3. Continued
V(F2)a 7.49 1.41 1.7 V(F1); V(F) 6.93 1.00 19 V(F,Cl); 43 V(Cl)
6 V(S);
71 V(F2);
1 V(F3)a
9, F4S V(S,F3)e 0.89 0.68 9.5 V(S); V(Cl) 6.41 1.14 39 V(F); 11 V(F,Cl)
4 V(S,Fe);
3 V(S,Fa);
3.5 V(Fa);
58 V(F3);
3.6 V(Fe)
V(S,F1)a 0.52 0.44 14.5 V(S); 20, FPH2 V(P,H1) 2.00 0.58 26 V(P,H2); 37 V(P); 13 V(F); 6 V(P,F)
5 V(S,Fe);
56 V(F1)
V(S) 2.50 1.13 5.5 V(S,Fe); V(P,F) 0.79 0.61 6 V(P,H); 9 V(P); 67 V(F)
5.5 V(S,Fa);
17 V(Fa);
10 V(Fe)
V(F3)e 6.88 1.37 4 V(S); V(P) 2.09 0.81 27 V(P,H); 15 V(F); 7 V(P,F)
14.6 V(S,F3);
59.5 V(F3);
1.5 V(Fe);
1.5 V(Fa)
V(F1)a 7.18 1.40 7 V(S); V(F) 7.91 1.40 3 V(P,H); 60 V(F); 15 V(P,F)
8 V(S,F1);
65 V(F1);
2 V(Fe)
10, F4SO V(S,F3)e 0.97 0.73 5 V(S,O); 21, PF3 V(P,F1) 0.96 0.71 9 V(P); 67 V(F1); 3 V(P,F2); 3.5 V(F2)
2.6 V(S,F4)e;
9 V(Fe);
4 V(Fa);
58 V(F3);
5 V(S,Fa)
V(S,F1)a 0.93 0.71 8 V(S,O); V(F1) 6.80 1.40 6 V(P); 18 V(P,F1); 57 V(F1)
5 V(S,Fe);
57 V(F1);
5 V(Fe)
V(F3)e 6.84 1.37 15.6 V(S,F3); V(P) 2.23 0.85 7 V(P,F); 16 V(F)
1.5 V(Fa);
59 V(F3)
V(F1)a 6.93 1.23 11 V(S,F1); 22, SiF4 V(Si,F1) 1.24 0.83 76 V(F1); 1.4 V(Si,F2)
69 V(F1)
11, F2PH3 V(P,H1) 2.07 0.58 17 V(P,H2); V(F1) 6.33 1.09 63 V(F1); 20 V(Si,F1); 1 V(F2); 2.5 V(F2)
8 V(P,F);
15 V(F)
V(P,F1) 0.87 0.65 6.5 V(P,H); 23, SF2 V(S,F) 0.58 0.48 62 V(F); 12 V(S); 1.5 V(S,F2); 2.5 V(F2)
69 V(F1);
<1 V(P,F2)
V(F1) 6.85 1.10 2.5 V(P,H); V(F) 6.95 1.35 61 V(F); 10.5 V(S,F); 6 V(S); 1.5 V(F2)
13 V(P,F1);
35 V(F1);
<1 V(F2)
V(S) 2.29 0.94 17 V(F); 6 V(S,F); 30 V(S2)
a
Arrows indicate a nonsynaptic basin directed to the joined atom
arose mainly from their dierent chemical surroundings The latter showed a noticeable electron delocalization.
(lone pairs). The delocalization observed in the linear compounds (1±
The linear structures presented the largest overall 5) is re¯ected also in the ELF ¯uctuation contributions
dierences compared to 16±19. The localization indexes values between the terminal basins, e.g., a value of 17%
were highly dierent, and the delocalization ones for 4. This delocalization observed for the linear com-
between the terminal atoms were larger with values in pounds strongly supports the 3c-4e model, in agreement
the 0.15±0.42 range between terminal atoms, for 3 and 4. with previous results [17a].
337
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