Lecture 24-28
Lecture 24-28
Lecture 24-28
LECTURE # 33
Biology Lecture # 05
Two nucleosomes
Chemical Composition of DNA
DNA is a complex macromolecule (large molecule). DNA stands for Deoxyribose
Nucleic Acid. The smallest unit of DNA is called a “nucleotide”; nucleotides join to
make polynucleotide. We can say that DNA consists of nucleotides joined together.
Nucleotides
Each nucleotide consists of:
1. Deoxyribose sugar
2. Phosphate group
3. Nitrogenous base
phas
Ana
Meta
phas Telophase
e
Structure of a nucleotide
There are four nucleotides based upon four different nitrogenous bases attached to them.
Nitrogenous bases are of two types: purines and pyrimidine. Purines include two bases
Adenine and Guanine which have a double ringed structure. Pyrimidine bases include the
other ones called Thymine and Cytosine that have single ringed structure.
Mechanism of Gene Action
Genes express themselves by making proteins. Making the proteins by DNA occur by
two processes called transcription and translation. Transcription is formation of a form
of RNA from DNA called messenger RNA (mRNA). mRNA is formed inside the nucleus
in eukaryotes and in nucleoid region in prokaryotes. The next process is translation,
which is formation of a protein or peptide by mRNA with the help of another organelle
called ribosome.
Replication is another function of DNA. It is doubling of DNA molecule to make two
copies of itself. Replication occurs before cell division to make copies of DNA for the
daughter cells.
Genetic code is a term used for the parts of DNA that code for proteins. A codon is a 3
nucleotides code for an amino acid, i.e., codon is a 3 nucleotide set of DNA molecule that
codes for a protein.
Transcription and Translation
• Transcription = DNA mRNA
• Translation = mRNA Protein
• The following scheme is called the central dogma of molecular biology / genetics
DNA RNA Protein
Transcription
• DNA mRNA
The process of transcription involves an enzyme called RNA polymerase. One strand of
DNA act as the template strand which is actually coded into the mRNA.
• Steps of transcription
Deoxyribose sugar
P
Transcription Process
• RNA polymerase moves on the gene, the helix unwinds and make a
complementary strand of RNA. This strand of mRNA protrudes out of
transcription bubble.
• At end of the gene there is a stop sequence. Usually it is a series of GC
base pairs followed by a series of AT base pairs.
• These sequences make a hair pin loop like structure which stops RNA
polymerase from transcribing.
• Thymine is coded as uracil in mRNA.
Promoter region on
DNA
RNA Template
Gene: the coding region
polymerase strand
Exon
Process of Translation
Initiation:
• The mRNA binds to the small unit of ribosome.
• The large ribosomal subunit has 3 binding sites called E (Exit), P (Peptidyl), and
A (Aminocyl).
• When the first codon (triplet code) is aligned at the P site then the large ribosomal
subunit attaches to the small subunit.
A ribosome
• A tRNA carrying the amino acid methionine attaches to the start codon (AUG) on
the messenger RNA.
Elongation:
• A tRNA with its amino acid attaches to the A binding site.
• Peptide bond formation occurs between the methionine and the amino acid carried
at the A binding site.
• Ribosome moves in the 3' direction down the messenger RNA by three bases,
shifting the tRNA and polypeptide chain to the P Binding site.
• The A binding site is open and a vacant tRNA (without amino acid) is in the E
binding site.
• Now, the next tRNA brings another amino acid and bind to A site.
• A peptide bond is formed between the second and this new (thirs) amino acid.
• Ribosome moves in 3’ direction and the vacant tRNA is released from the E site.
• This process continues until a stop codon arrives on mRNA.
• A Releasing factor comes and binds to the A site in place of stop codon. The
polypeptide chain separates from tRNA and ribosome. Then ribosomal units
disassemble again. mRNA molecule also released which has been coded.
Peptide bond is formed between the amino acids brought by tRNAs present on P and A
sites.
Growing polypeptide is present on P site and empty amino acid on E site. New
tRNA with an amino acid will come and attach on A site.
Exercise