Published November 7, 2017
| Version v1.0
Dataset
Open
A Simulated Heterozygous Diploid Genome for Third-gen Sequencing, Assembly, and Curation
Description
A simulated heterozygous diploid genome based on Saccharomyces cerevisiae, and S. paradoxus homologous chromosomes.
Simulated PacBio subreads were generated from both parent haplomes and mixed together. A phased assembly was produced using FALCON assembler and FALCON Unzip (doi:10.1038/nmeth.4035). This dataset and assembly were then used to validate the Purge Haplotigs pipeline (https://bitbucket.org/mroachawri/purge_haplotigs). See workflow.sh for commands, comments and file descriptions.
Files
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Files
(120.9 MB)
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