Codes related to the project "Threshold-based epidemic dynamics in systems with memory"

Illustrate how to fit ODEs to time-series data in OpenBUGS with R

tsiR: An R package for time-series Susceptible-Infected-Recovered models of epidemics

Graph based epidemic simulations.

SEIR epidemic model

SARS-CoV-2 disease model

Explore strategies of social distancing on epidemic w/ SIR model and R - from Gandon, Lion, Day

Implementation of SIR algorithm

A basic SIR model to improve my understanding on the subject.

An epidemic stimulator, developed and built by brute force to learn more on biological systems.

UTLDR: an agent-based framework for modeling infectious diseases and public interventions

A framework to fit an ensemble of epidemic models to one or multiple regions at once

Simulator for SIR and SEIR model with cookbook for epidemiological models with a simple data tracker like vaccine tracker,data on deaths,cases,etc

This repository contains the lab and the project done during the course of modelling and simulation

The MetaWards R package. This supports easy install of MetaWards R bindings from GitHub

Analyzing the spread of the novel Coronavirus COVID-19

This repository contains reproducible research on an epidemiological model for understanding COVID-19 spreading rates, as part of the DTU Data Science course 22100: R for Bio Data Science

👨‍👩‍👦‍👦ABM research 👨‍👩‍👧‍👦

Compare disease transmission in a social network with universal mixing

Start on a project for using genetic algorithms to adjust parameters in an epidemic model