Many temperate species experienced demographic and range contractions in response to climatic cha... more Many temperate species experienced demographic and range contractions in response to climatic changes during Pleistocene glaciations. In this study, we investigate the evolutionary history of the Tyrrhenian tree frog Hyla sarda, a species inhabiting the Corsica-Sardinia island system (Western Mediterranean basin). We used sequence analysis of two mitochondrial (overall 1229 bp) and three nuclear (overall 1692 bp) gene fragments to assess the phylogeography and demographic history of this species, and species distribution modelling (SDM) to predict its range variation over time. Phylogeographic, historical demographic and SDM analyses consistently indicate that H. sarda does not conform to the scenario generally expected for temperate species but rather underwent demographic and range expansion mostly during the last glacial phase. Palaeogeographic data and SDM analyses suggest that such expansion was driven by the glaciation-induced increase in lowland areas during marine regression. This unusual scenario suggests that at least some temperate species may not have suffered the adverse effects of glacial climate on their population size and range extent, owing to the mitigating effects of other glaciations-induced palaeoenvironmental changes. We discuss previous clues for the occurrence of such a scenario in other species and some possible challenges with its identification. Early phylogeographic literature suggested that responses to the Pleistocene glacial-interglacial cycles were expected to vary among species and regions. Our results point out that such variation may have been greater than previously thought.
ABSTRACT. An extended survey of taxa belonging to two genera of Cricetomyinae (Cricetomys and Sac... more ABSTRACT. An extended survey of taxa belonging to two genera of Cricetomyinae (Cricetomys and Saccostomus), one Gerbillinae (Gerbilliscus), eight Murinae (Acomys, Aethomys, Arvicanthis, Lemniscomys, Mus (Nannomys), Mastomys, Grammomys, Stenocephalemys) and one Myoxidae (Graphiurus) was carried out as part of the EU programme “Staplerat” involving Ethiopia, Kenya, Tanzania and Zambia. Here we report the diploid and autosomal fundamental numbers of these rodent taxa. Seventeen of them ...
We present a data set on the biodiversity of Italian freshwaters, including lakeshores and riverb... more We present a data set on the biodiversity of Italian freshwaters, including lakeshores and riverbanks of natural (N=379: springs, streams and lakes) and artificial (N=11: fountains) sites. The data set belongs partly to the Italian Long Term Ecological Research network (LTER-Italy) and partly to LifeWatch, the European e-Science infrastructure for biodiversity and ecosystem research. The data included cover a time period corresponding to the last fifty years (1962-2014). They span a large number of taxa from prokaryotes and unicellular eukaryotes to vertebrates and plants, including taxa linked to the aquatic habitat in at least part of their life cycles (like immature stages of insects, amphibians, birds and vascular plants). The data set consists of 6463 occurrence data and distribution records for 1738 species. The complete data set is available in csv file format via the LifeWatch Service Centre.
Small mammals ( Rodentia , Soricomorpha and Erinaceomorpha ) play a crucial ecological role for t... more Small mammals ( Rodentia , Soricomorpha and Erinaceomorpha ) play a crucial ecological role for their distribution and importance in food chains, as well as for being considered environmental bioindicators . Thus, they represent excellent models for understanding the evolutionary processes of ecosystems, population dynamics under changing environmental conditions, and habitat vulnerabilities. However, some rodents may help the spread of human diseases and are responsible for impacts on agriculture, forestry, and ecosystems. Consequently, small mammal species are often neglected in conservation biology, and only a few of them are protected according to national and European laws and directives. In this work, we summarize open questions related to Italian small mammals and analyze conservation issues linked to these species. We address research, management and conservation priorities by considering ongoing activities and the novelties as regards the taxonomy and zoogeography . In Italy,
The black rat Rattus rattus is recognized as one of the world’s most harmful invasive species. It... more The black rat Rattus rattus is recognized as one of the world’s most harmful invasive species. It has spread across the globe by passive human transport and the dynamics of colonization have been investigated in several areas of the world. However, data for the Mediterranean basin are still lacking. We investigated the black rat colonization of the western Mediterranean basin by means of mitochondrial genes. Mitochondrial control region and cytochrome b gene were sequenced in order to quantify genetic diversity of western Mediterranean black rats. Maximum likelihood phylogenetic analysis based on cytochrome b was used to assign specimens to a specific lineage of the R. rattus species complex. The mitochondrial control region was used to reconstruct phylogeographic pattern by statistical parsimony network and to asses historical demography of western Mediterranean black rats. The results show an unexpectedly low diversity considering that the Mediterranean basin has been a trade rout...
Many temperate species experienced demographic and range contractions in response to climatic cha... more Many temperate species experienced demographic and range contractions in response to climatic changes during Pleistocene glaciations. In this study, we investigate the evolutionary history of the Tyrrhenian tree frog Hyla sarda, a species inhabiting the Corsica-Sardinia island system (Western Mediterranean basin). We used sequence analysis of two mitochondrial (overall 1229 bp) and three nuclear (overall 1692 bp) gene fragments to assess the phylogeography and demographic history of this species, and species distribution modelling (SDM) to predict its range variation over time. Phylogeographic, historical demographic and SDM analyses consistently indicate that H. sarda does not conform to the scenario generally expected for temperate species but rather underwent demographic and range expansion mostly during the last glacial phase. Palaeogeographic data and SDM analyses suggest that such expansion was driven by the glaciation-induced increase in lowland areas during marine regression. This unusual scenario suggests that at least some temperate species may not have suffered the adverse effects of glacial climate on their population size and range extent, owing to the mitigating effects of other glaciations-induced palaeoenvironmental changes. We discuss previous clues for the occurrence of such a scenario in other species and some possible challenges with its identification. Early phylogeographic literature suggested that responses to the Pleistocene glacial-interglacial cycles were expected to vary among species and regions. Our results point out that such variation may have been greater than previously thought.
ABSTRACT. An extended survey of taxa belonging to two genera of Cricetomyinae (Cricetomys and Sac... more ABSTRACT. An extended survey of taxa belonging to two genera of Cricetomyinae (Cricetomys and Saccostomus), one Gerbillinae (Gerbilliscus), eight Murinae (Acomys, Aethomys, Arvicanthis, Lemniscomys, Mus (Nannomys), Mastomys, Grammomys, Stenocephalemys) and one Myoxidae (Graphiurus) was carried out as part of the EU programme “Staplerat” involving Ethiopia, Kenya, Tanzania and Zambia. Here we report the diploid and autosomal fundamental numbers of these rodent taxa. Seventeen of them ...
We present a data set on the biodiversity of Italian freshwaters, including lakeshores and riverb... more We present a data set on the biodiversity of Italian freshwaters, including lakeshores and riverbanks of natural (N=379: springs, streams and lakes) and artificial (N=11: fountains) sites. The data set belongs partly to the Italian Long Term Ecological Research network (LTER-Italy) and partly to LifeWatch, the European e-Science infrastructure for biodiversity and ecosystem research. The data included cover a time period corresponding to the last fifty years (1962-2014). They span a large number of taxa from prokaryotes and unicellular eukaryotes to vertebrates and plants, including taxa linked to the aquatic habitat in at least part of their life cycles (like immature stages of insects, amphibians, birds and vascular plants). The data set consists of 6463 occurrence data and distribution records for 1738 species. The complete data set is available in csv file format via the LifeWatch Service Centre.
Small mammals ( Rodentia , Soricomorpha and Erinaceomorpha ) play a crucial ecological role for t... more Small mammals ( Rodentia , Soricomorpha and Erinaceomorpha ) play a crucial ecological role for their distribution and importance in food chains, as well as for being considered environmental bioindicators . Thus, they represent excellent models for understanding the evolutionary processes of ecosystems, population dynamics under changing environmental conditions, and habitat vulnerabilities. However, some rodents may help the spread of human diseases and are responsible for impacts on agriculture, forestry, and ecosystems. Consequently, small mammal species are often neglected in conservation biology, and only a few of them are protected according to national and European laws and directives. In this work, we summarize open questions related to Italian small mammals and analyze conservation issues linked to these species. We address research, management and conservation priorities by considering ongoing activities and the novelties as regards the taxonomy and zoogeography . In Italy,
The black rat Rattus rattus is recognized as one of the world’s most harmful invasive species. It... more The black rat Rattus rattus is recognized as one of the world’s most harmful invasive species. It has spread across the globe by passive human transport and the dynamics of colonization have been investigated in several areas of the world. However, data for the Mediterranean basin are still lacking. We investigated the black rat colonization of the western Mediterranean basin by means of mitochondrial genes. Mitochondrial control region and cytochrome b gene were sequenced in order to quantify genetic diversity of western Mediterranean black rats. Maximum likelihood phylogenetic analysis based on cytochrome b was used to assign specimens to a specific lineage of the R. rattus species complex. The mitochondrial control region was used to reconstruct phylogeographic pattern by statistical parsimony network and to asses historical demography of western Mediterranean black rats. The results show an unexpectedly low diversity considering that the Mediterranean basin has been a trade rout...
Uploads
natural (N=379: springs, streams and lakes) and artificial (N=11: fountains) sites. The data set belongs partly to the Italian Long Term Ecological Research network (LTER-Italy) and partly to LifeWatch, the European e-Science infrastructure for biodiversity and ecosystem research. The data included cover a time period corresponding to the last fifty years (1962-2014). They span a large number of taxa from prokaryotes and unicellular eukaryotes to vertebrates and plants, including taxa linked to the aquatic habitat in at least part of their life cycles (like immature stages of insects, amphibians, birds and vascular plants). The data set consists of 6463 occurrence data and distribution records for 1738 species. The complete data set is available in csv file format via the LifeWatch Service Centre.
natural (N=379: springs, streams and lakes) and artificial (N=11: fountains) sites. The data set belongs partly to the Italian Long Term Ecological Research network (LTER-Italy) and partly to LifeWatch, the European e-Science infrastructure for biodiversity and ecosystem research. The data included cover a time period corresponding to the last fifty years (1962-2014). They span a large number of taxa from prokaryotes and unicellular eukaryotes to vertebrates and plants, including taxa linked to the aquatic habitat in at least part of their life cycles (like immature stages of insects, amphibians, birds and vascular plants). The data set consists of 6463 occurrence data and distribution records for 1738 species. The complete data set is available in csv file format via the LifeWatch Service Centre.