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ORCIDEroma Abeysinghe
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2020 – today
- 2024
[j2]Christian G. Fink
, Pavel Sanda, Logan Bayer, Eroma Abeysinghe, Maxim Bazhenov, Giri P. Krishnan:
Python/NEURON code for simulating biophysically realistic thalamocortical dynamics during sleep. Softw. Impacts 21: 100667 (2024)- [c30]Yasith Jayawardana, Dimuthu Wannipurage, Eroma Abeysinghe, Suresh Marru:
Enhancing Research Productivity: Seamless Integration of Personal Devices and HPC Resources with the Cybershuttle Notebook Gateway. PEARC 2024: 41:1-41:5 - 2023
- [c29]Suresh Marru, Marlon E. Pierce, Beth Plale, Sudhakar Pamidighantam, Dimuthu Wannipurage, Marcus Christie, Isuru Ranawaka, Eroma Abeysinghe, Rob Quick, Emad Tajkhorshid, Seid Koric, Jim Basney, Mariano Spivak, Barry Isralewitz, Rafael C. Bernardi, Diego Enry Barreto Gomes, Giri P. Krishnan, Maxim Bazhenov, Shava Smallen, Amit Majumdar, Anton Arkhipov, Kael Dai, Xiao-Ping Liu, Kenneth Yoshimoto:
Cybershuttle: An End-to-End Cyberinfrastructure Continuum to Accelerate Discovery in Science and Engineering. PEARC 2023: 26-34 - [c28]Isuru Ranawaka, Eroma Abeysinghe, Dimuthu Wannipurage, Dinuka De Silva, Emre H. Brookes, Suresh Marru, Marcus Christie, Sudhakar Pamidighantam, Marlon E. Pierce:
Airavata Metascheduler: A Reliable, Fault Tolerant, and Resource-Aware Job Scheduling Service. PEARC 2023: 35-42 - [c27]Eroma Abeysinghe, Cameron W. Smith, Liang Wang, James Juno, Matthew Mccall, Marlon E. Pierce, Mark S. Shephard:
Defining a Cyberinfrastructure for Plasma Science and Space Weather Simulations. PEARC 2023: 169-172 - 2022
- [c26]Justin Tran, Eroma Abeysinghe, John F. LaDisa Jr., Alison L. Marsden, Marlon E. Pierce:
SimVascular Gateway for Education and Research. PEARC 2022: 73:1-73:4 - [c25]Dinuka De Silva, Derek Weitzel, Joseph Yesselman, Marcus Christie, Robert Quick, Eroma Abeysinghe, Marlon E. Pierce:
Building the RNAMake Gateway on PATh: a Student-Led Design Project. PEARC 2022: 86:1-86:2 - [i2]Dimuthu Wannipurage, Indrajit Deb, Eroma Abeysinghe, Sudhakar Pamidighantam, Suresh Marru, Marlon E. Pierce, Aaron T. Frank:
Experiences with managing data parallel computational workflows for High-throughput Fragment Molecular Orbital (FMO) Calculations. CoRR abs/2201.12237 (2022) - 2021
- [c24]Suresh Marru, Tanya Kuruvilla, Eroma Abeysinghe, Donald F. McMullen, Marlon E. Pierce, David Gene Morgan, Steven L. Tait, Roger W. Innes:
User-Centric Design and Evolvable Architecture for Science Gateways: A Case Study. CCGRID 2021: 267-276 - [i1]Dimuthu Wannipurage, Isuru Ranawaka, Eroma Abeysinghe, Marcus Christie, Suresh Marru, Marlon E. Pierce:
A Multi-Protocol, Secure, and Dynamic Data Storage Integration Frameworkfor Multi-tenanted Science Gateway Middleware. CoRR abs/2107.03882 (2021) - 2020
- [j1]Marcus A. Christie, Anuj Bhandar, Supun Nakandala, Suresh Marru, Eroma Abeysinghe, Sudhakar Pamidighantam, Marlon E. Pierce:
Managing authentication and authorization in distributed science gateway middleware. Future Gener. Comput. Syst. 111: 780-785 (2020) - [c23]Marcus Christie, Suresh Marru, Eroma Abeysinghe, Dimuthu Upeksha, Sudhakar Pamidighantam, Stephen Paul Adithela, Eldho Mathulla, Aarushi Bisht, Shivam Rastogi, Marlon E. Pierce:
An extensible Django-based web portal for Apache Airavata. PEARC 2020: 160-167 - [c22]Jennifer R. Dierauer, Chen Zhu, Lei Gong, Alan Walsh, Sudhakar Pamidighantam, Jun Wang, Marcus Christie, Eroma Abeysinghe:
FutureWater Indiana: A science gateway for spatio-temporal modeling of water in Wabash basin with a focus on climate change. PEARC 2020: 252-261 - [c21]Sudhakar Pamidighantam, Jun Wang, Marcus Christie, Eroma Abeysinghe, Kevin M. Ellett, Ryan Kammer, Sean Yaw, Richard S. Middleton, Brendan A. Hoover:
A Science Gateway for Simulating the Economics of Carbon Sequestration Technologies: SimCCS2.0. PEARC 2020: 262-269 - [c20]In Kwon Choi, Eroma Abeysinghe, Eric Coulter, Suresh Marru, Marlon E. Pierce, Xiaowen Liu:
TopPIC Gateway: A Web Gateway for Top-Down Mass Spectrometry Data Interpretation. PEARC 2020: 461-464 - [c19]Bowei Kang, Eroma Abeysinghe, Divyansh Agarwal, Quanli Wang, Sudhakar Pamidighantam, Mo Huang, Nancy Ruonan Zhang, Jingshu Wang:
Online Single-cell RNA-seq Data Denoising with Transfer Learning. PEARC 2020: 469-472
2010 – 2019
- 2019
- [c18]Dimuthu Wannipurage, Suresh Marru, Marlon E. Pierce, Eroma Abeysinghe, Sudhakar Pamidighantam, Marcus Christie, Gourav Shenoy, Ajinkya Dhamnaskar, Lahiru Jayathilaka:
Implementing a Flexible, Fault Tolerant Job Management System for Science Gateways. PEARC 2019: 15:1-15:8 - [c17]Suresh Marru, Marlon E. Pierce, Eroma Abeysinghe, Sudhakar Pamidighantam, Marcus Christie, Dimuthu Wannipurage:
Experiences from scaling scale Science Gateway operations. PEARC 2019: 102:1-102:4 - [c16]Meghna Babbar-Sebens, Samuel J. Rivera, Eroma Abeysinghe, Suresh Marru, Marlon E. Pierce, Eric Coulter, Majid Farahani, Dimuthu Wannipurage, Marcus Christie:
InterACTWEL Science Gateway for Adaptation Planning in Food-Energy-Water Sectors of Local Communities. PEARC 2019: 110:1-110:4 - [c15]Eroma Abeysinghe, Michal Brylinski, Marcus Christie, Suresh Marru, Marlon E. Pierce:
LSU Computational System Biology Gateway for Education. PEARC 2019: 112:1-112:4 - [c14]Eric Lease Morgan, Eroma Abeysinghe, Sudhakar Pamidighantam, Eric Coulter, Suresh Marru, Marlon E. Pierce:
The Distant Reader: Tool for Reading. PEARC 2019: 124:1-124:4 - [c13]Adison A. Kleinsasser, Sudhakar Pamidighantam, Douglas M. Jennewein, Joseph D. Madison, Marcus Christie, Eroma Abeysinghe, Suresh Marru, Marlon E. Pierce:
The USD Science Gateway: A Bridge Between Research and Advanced Computing. PEARC 2019: 125:1-125:4 - 2018
- [c12]Zhong Wang, Marcus A. Christie, Eroma Abeysinghe, Tinyi Chu, Suresh Marru, Marlon E. Pierce, Charles G. Danko:
Building a Science Gateway For Processing and Modeling Sequencing Data Via Apache Airavata. PEARC 2018: 39:1-39:7 - [c11]Kyle Levi, Mats Rynge, Eroma Abeysinghe, Robert A. Edwards:
Searching the Sequence Read Archive using Jetstream and Wrangler. PEARC 2018: 50:1-50:7 - [c10]Yinzhi Wang, Sudhakar Pamidighantam, Sean Yaw, Eroma Abeysinghe, Suresh Marru, Marcus Christie, Kevin M. Ellett, Marlon E. Pierce, Richard S. Middleton:
A New Science Gateway to Provide Decision Support on Carbon Capture and Storage Technologies. PEARC 2018: 76:1-76:3 - [c9]Cameron W. Smith, Eroma Abeysinghe, Suresh Marru, Kenneth E. Jansen:
PHASTA Science Gateway for High Performance Computational Fluid Dynamics. PEARC 2018: 94:1-94:4 - [c8]Joseph D. Madison, Eroma Abeysinghe, Sudhakar Pamidighantam, Suresh Marru, Marcus Christie, Douglas M. Jennewein, Marlon E. Pierce:
Science Gateway Implementation at the University of South Dakota: Applications in Research and Education. PEARC 2018: 97:1-97:4 - [c7]Sai Susheel Sunkara, Chet Langin, Marlon E. Pierce, Eroma Abeysinghe, Sudhakar Pamidighantam, Suresh Marru:
Simplifying Access to Campus Resources at Southern Illinois University with a Science Gateway. PEARC 2018: 98:1-98:4 - [c6]Marlon E. Pierce, Suresh Marru, Eroma Abeysinghe, Sudhakar Pamidighantam, Marcus Christie, Dimuthu Wannipurage:
Supporting Science Gateways Using Apache Airavata and SciGaP Services. PEARC 2018: 99:1-99:4 - [c5]Eroma Abeysinghe, Michal Brylinski, Marcus Christie, Suresh Marru, Marlon E. Pierce:
The CSBG - LSU Gateway: Web based Hosted Gateway for Computational System Biology Application Tools from Louisiana State University. PEARC 2018: 100:1-100:4 - [c4]Nathan M. Wilson, Suresh Marru, Eroma Abeysinghe, Marcus A. Christie, Gabriel D. Maher, Adam R. Updegrove, Marlon E. Pierce, Alison L. Marsden:
Using a Science Gateway to Deliver SimVascular Software as a Service for Classroom Instruction. PEARC 2018: 102:1-102:4 - 2017
- [c3]Cameron W. Smith, Eroma Abeysinghe:
The PHASTA Science Gateway: Web-based Execution of Adaptive Computational Fluid Dynamics Simulations. PEARC 2017: 70:1-70:4 - 2016
- [c2]Sudhakar Pamidighantam, Supun Nakandala, Eroma Abeysinghe, Chathuri Wimalasena, Shameera Rathnayaka, Suresh Marru, Marlon E. Pierce:
Community Science Exemplars in SEAGrid Science Gateway: Apache Airavata Based Implementation of Advanced Infrastructure. ICCS 2016: 1927-1939 - [c1]Supun Nakandala, Sudhakar Pamidighantam, Shameera Yodage, Nipurn Doshi, Eroma Abeysinghe, Chathuri Peli Kankanamalage, Suresh Marru, Marlon E. Pierce:
Anatomy of the SEAGrid Science Gateway. XSEDE 2016: 40:1-40:8
Coauthor Index
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