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2020 – today
- 2024
[j6]Florian Borchert
, Ignacio Llorca, Matthieu-P. Schapranow:
Improving biomedical entity linking for complex entity mentions with LLM-based text simplification. Database J. Biol. Databases Curation 2024 (2024)- [j5]Keno K. Bressem, Jens-Michalis Papaioannou, Paul Grundmann, Florian Borchert, Lisa C. Adams, Leonhard Liu, Felix Busch, Lina Xu, Jan P. Loyen, Stefan Markus Niehues, Moritz Augustin, Lennart Grosser, Marcus R. Makowski, Hugo J. W. L. Aerts, Alexander Löser:
medBERT.de: A comprehensive German BERT model for the medical domain. Expert Syst. Appl. 237(Part C): 121598 (2024) - 2023
- [j4]Nektarios Ladas, Florian Borchert, Stefan Franz, Alina Rehberg, Natalia Strauch, Kim Katrin Sommer, Michael Marschollek, Matthias Gietzelt:
Programming techniques for improving rule readability for rule-based information extraction natural language processing pipelines of unstructured and semi-structured medical texts. Health Informatics J. 29(2): 146045822311646 (2023) - [j3]Matthieu-P. Schapranow, Florian Borchert, Nina Bougatf, Hauke Hund, Roland Eils:
Software-Tool Support for Collaborative, Virtual, Multi-Site Molecular Tumor Boards. SN Comput. Sci. 4(4): 358 (2023) - [c11]Ignacio Llorca, Florian Borchert, Matthieu-P. Schapranow:
A Meta-dataset of German Medical Corpora: Harmonization of Annotations and Cross-corpus NER Evaluation. ClinicalNLP@ACL 2023: 171-181 - [c10]Sandro Steinwand, Florian Borchert, Silvia Winkler, Matthieu-P. Schapranow:
GGTWEAK: Gene Tagging with Weak Supervision for German Clinical Text. AIME 2023: 183-192 - [c9]Julian Hugo, Susanne Ibing, Florian Borchert, Jan-Philipp Sachs, Judy Cho, Ryan C. Ungaro, Erwin P. Böttinger:
Machine Learning Based Prediction of Incident Cases of Crohn's Disease Using Electronic Health Records from a Large Integrated Health System. AIME 2023: 293-302 - [c8]Niklas Kammer, Florian Borchert, Silvia Winkler, Gerard de Melo, Matthieu-P. Schapranow:
Resolving Elliptical Compounds in German Medical Text. BioNLP@ACL 2023: 292-305 - [c7]Florian Borchert, Ignacio Llorca, Matthieu-P. Schapranow:
Cross-Lingual Candidate Retrieval and Re-ranking for Biomedical Entity Linking. CLEF 2023: 135-147 - [i4]Keno K. Bressem, Jens-Michalis Papaioannou, Paul Grundmann, Florian Borchert, Lisa C. Adams, Leonhard Liu, Felix Busch, Lina Xu, Jan P. Loyen, Stefan Markus Niehues, Moritz Augustin, Lennart Grosser, Marcus R. Makowski, Hugo J. W. L. Aerts, Alexander Löser:
MEDBERT.de: A Comprehensive German BERT Model for the Medical Domain. CoRR abs/2303.08179 (2023) - [i3]Florian Borchert, Ignacio Llorca, Roland Roller, Bert Arnrich, Matthieu-P. Schapranow:
xMEN: A Modular Toolkit for Cross-Lingual Medical Entity Normalization. CoRR abs/2310.11275 (2023) - [i2]Danielly F. O. de Paula, Florian Borchert, Ariane Sasso, Falk Uebernickel:
Understanding emotions in the context of IT-based self-monitoring. CoRR abs/2311.05449 (2023) - 2022
- [c6]Florian Borchert, Matthieu-P. Schapranow:
HPI-DHC @ BioASQ DisTEMIST: Spanish Biomedical Entity Linking with Pre-trained Transformers and Cross-lingual Candidate Retrieval. CLEF (Working Notes) 2022: 244-258 - [c5]Florian Borchert, Christina Lohr, Luise Modersohn, Jonas Witt, Thomas Langer, Markus Follmann, Matthias Gietzelt, Bert Arnrich, Udo Hahn, Matthieu-P. Schapranow:
GGPONC 2.0 - The German Clinical Guideline Corpus for Oncology: Curation Workflow, Annotation Policy, Baseline NER Taggers. LREC 2022: 3650-3660 - 2021
- [j2]Florian Borchert, Andreas Mock, Aurelie Tomczak, Jonas Hügel, Samer Alkarkoukly, Alexander Knurr, Anna-Lena Volckmar, Albrecht Stenzinger, Peter Schirmacher, Jürgen Debus, Dirk Jäger, Thomas Longerich, Stefan Fröhling, Roland Eils, Nina Bougatf, Ulrich Sax, Matthieu-P. Schapranow:
Knowledge bases and software support for variant interpretation in precision oncology. Briefings Bioinform. 22(6) (2021) - [j1]Florian Borchert, Andreas Mock, Aurelie Tomczak, Jonas Hügel, Samer Alkarkoukly, Alexander Knurr, Anna-Lena Volckmar, Albrecht Stenzinger, Peter Schirmacher, Jürgen Debus, Dirk Jäger, Thomas Longerich, Stefan Fröhling, Roland Eils, Nina Bougatf, Ulrich Sax, Matthieu-P. Schapranow:
Knowledge bases and software support for variant interpretation in precision oncology. Briefings Bioinform. 22(6) (2021) - [c4]Florian Borchert, Laura Meister, Thomas Langer, Markus Follmann, Bert Arnrich, Matthieu-P. Schapranow:
Controversial Trials First: Identifying Disagreement Between Clinical Guidelines and New Evidence. AMIA 2021 - [c3]Aadil Rasheed, Florian Borchert, Lasse Kohlmeyer, Richard Henkenjohann, Matthieu-P. Schapranow:
A Comparison of Concept Embeddings for German Clinical Corpora. BIBM 2021: 2314-2321 - [c2]Richard Henkenjohann, Benjamin Bergner, Florian Borchert, Nina Bougatf, Hauke Hund, Roland Eils, Matthieu-P. Schapranow:
An Engineering Approach Towards Multi-site Virtual Molecular Tumor Board Software. IHAW 2021: 156-170 - 2020
- [c1]Florian Borchert, Christina Lohr, Luise Modersohn, Thomas Langer, Markus Follmann, Jan-Philipp Sachs, Udo Hahn, Matthieu-P. Schapranow:
GGPONC: A Corpus of German Medical Text with Rich Metadata Based on Clinical Practice Guidelines. LOUHI@EMNLP 2020: 38-48 - [i1]Florian Borchert, Christina Lohr, Luise Modersohn, Thomas Langer, Markus Follmann, Jan-Philipp Sachs, Udo Hahn, Matthieu-P. Schapranow:
GGPONC: A Corpus of German Medical Text with Rich Metadata Based on Clinical Practice Guidelines. CoRR abs/2007.06400 (2020)
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last updated on 2024-12-10 20:47 CET by the dblp team
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