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Peter J. Basser
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2020 – today
- 2023
- [j31]Kulam Najmudeen Magdoom, Alexandru Vlad Avram, Joelle E. Sarlls
, Dario Gasbarra, Peter J. Basser
:
A novel framework for in-vivo diffusion tensor distribution MRI of the human brain. NeuroImage 271: 120003 (2023) - [j30]Kadharbatcha S. Saleem
, Alexandru Vlad Avram
, Cecil Chern-Chyi Yen
, Kulam Najmudeen Magdoom, Vincent Schram, Peter J. Basser
:
Multimodal anatomical mapping of subcortical regions in marmoset monkeys using high-resolution MRI and matched histology with multiple stains. NeuroImage 281: 120311 (2023) - 2022
- [j29]Alexandru Vlad Avram
, Kadharbatcha S. Saleem, Michal E. Komlosh, Cecil Chern-Chyi Yen
, Frank Q. Ye, Peter J. Basser:
High-resolution cortical MAP-MRI reveals areal borders and laminar substructures observed with histological staining. NeuroImage 264: 119653 (2022) - 2021
- [j28]Susie Yi Huang, Thomas Witzel, Boris Keil
, Alina Scholz, Mathias Davids, Peter Dietz, Elmar Rummert, Rebecca Ramb, John E. Kirsch, Anastasia Yendiki
, Qiuyun Fan, Qiyuan Tian, Gabriel Ramos-Llordén, Hong-Hsi Lee, Aapo Nummenmaa, Berkin Bilgic
, Kawin Setsompop, Fuyixue Wang
, Alexandru Vlad Avram
, Michal E. Komlosh, Dan Benjamini
, Kulam Najmudeen Magdoom, Sudhir K. Pathak, Walter Schneider, Dmitry S. Novikov, Els Fieremans, Slimane Tounekti
, Choukri Mekkaoui, Jean Augustinack, Daniel R. Berger, Alexander Shapson-Coe, Jeff Lichtman, Peter J. Basser, Lawrence L. Wald, Bruce R. Rosen:
Connectome 2.0: Developing the next-generation ultra-high gradient strength human MRI scanner for bridging studies of the micro-, meso- and macro-connectome. NeuroImage 243: 118530 (2021) - [j27]Kadharbatcha S. Saleem, Alexandru Vlad Avram
, Daniel R. Glen, Cecil Chern-Chyi Yen
, Frank Q. Ye, Michal E. Komlosh, Peter J. Basser:
High-resolution mapping and digital atlas of subcortical regions in the macaque monkey based on matched MAP-MRI and histology. NeuroImage 245: 118759 (2021) - 2020
- [j26]Dan Benjamini
, Elizabeth B. Hutchinson, Michal E. Komlosh, Courtney J. Comrie
, Susan C. Schwerin
, Guofeng Zhang, Carlo Pierpaoli
, Peter J. Basser:
Direct and specific assessment of axonal injury and spinal cord microenvironments using diffusion correlation imaging. NeuroImage 221: 117195 (2020)
2010 – 2019
- 2019
- [j25]Alexandru Vlad Avram
, Joelle E. Sarlls
, Peter J. Basser:
Measuring non-parametric distributions of intravoxel mean diffusivities using a clinical MRI scanner. NeuroImage 185: 255-262 (2019) - [j24]Dan Benjamini
, Michal E. Komlosh, Nathan H. Williamson
, Peter J. Basser:
Generalized Mean Apparent Propagator MRI to Measure and Image Advective and Dispersive Flows in Medicine and Biology. IEEE Trans. Medical Imaging 38(1): 11-20 (2019) - 2018
- [j23]Jian Cheng
, Peter J. Basser:
Director Field Analysis (DFA): Exploring Local White Matter Geometric Structure in Diffusion MRI. Medical Image Anal. 43: 112-128 (2018) - [j22]Jian Cheng
, Dinggang Shen
, Pew-Thian Yap
, Peter J. Basser:
Single- and Multiple-Shell Uniform Sampling Schemes for Diffusion MRI Using Spherical Codes. IEEE Trans. Medical Imaging 37(1): 185-199 (2018) - [c20]Jian Cheng, Tao Liu, Feng Shi
, Ruiliang Bai, Jicong Zhang, Haogang Zhu, Dacheng Tao, Peter J. Basser:
On Quantifying Local Geometric Structures of Fiber Tracts. MICCAI (3) 2018: 392-400 - 2017
- [j21]Dan Benjamini
, Peter J. Basser:
Magnetic resonance microdynamic imaging reveals distinct tissue microenvironments. NeuroImage 163: 183-196 (2017) - [j20]Dario Gasbarra, Sinisa Pajevic, Peter J. Basser:
Eigenvalues of Random Matrices with Isotropic Gaussian Noise and the Design of Diffusion Tensor Imaging Experiments. SIAM J. Imaging Sci. 10(3): 1511-1548 (2017) - [c19]Jian Cheng
, Peter J. Basser:
Director Field Analysis to Explore Local White Matter Geometric Structure in Diffusion MRI. IPMI 2017: 427-439 - [i3]Jian Cheng, Peter J. Basser:
Director Field Analysis (DFA): Exploring Local White Matter Geometric Structure in diffusion MRI. CoRR abs/1706.01862 (2017) - [i2]Jian Cheng, Dinggang Shen, Pew-Thian Yap, Peter J. Basser:
Single- and Multiple-Shell Uniform Sampling Schemes for Diffusion MRI Using Spherical Codes. CoRR abs/1706.06682 (2017) - 2016
- [j19]Cheng Guan Koay, Ping Hong Yeh, John M. Ollinger, M. Okan Irfanoglu, Carlo Pierpaoli, Peter J. Basser, Terrence R. Oakes, Gerard Riedy:
Tract Orientation and Angular Dispersion Deviation Indicator (TOADDI): A framework for single-subject analysis in diffusion tensor imaging. NeuroImage 126: 151-163 (2016) - [j18]Alexandru Vlad Avram
, Joelle E. Sarlls
, Alan S. Barnett, Evren Özarslan, Cibu Thomas, M. Okan Irfanoglu, Elizabeth B. Hutchinson
, Carlo Pierpaoli, Peter J. Basser:
Clinical feasibility of using mean apparent propagator (MAP) MRI to characterize brain tissue microstructure. NeuroImage 127: 422-434 (2016) - [j17]Dan Benjamini
, Michal E. Komlosh, Lynne A. Holtzclaw
, Uri Nevo, Peter J. Basser:
White matter microstructure from nonparametric axon diameter distribution mapping. NeuroImage 135: 333-344 (2016) - [c18]Cornelia Wenger, Ze'ev Bomzon, Ricardo Salvador, Peter J. Basser, Pedro Cavaleiro Miranda:
Simplified realistic human head model for simulating Tumor Treating Fields (TTFields). EMBC 2016: 5664-5667 - 2015
- [c17]Cornelia Wenger
, Ricardo Salvador, Peter J. Basser, Pedro Cavaleiro Miranda:
Modeling Tumor Treating fields (TTFields) application within a realistic human head model. EMBC 2015: 2555-2558 - [c16]Cornelia Wenger
, Moshe Giladi, Ze'ev Bomzon, Ricardo Salvador, Peter J. Basser, Pedro Cavaleiro Miranda:
Modeling Tumor Treating Fields (TTFields) application in single cells during metaphase and telophase. EMBC 2015: 6892-6895 - [c15]Jian Cheng
, Dinggang Shen, Peter J. Basser, Pew-Thian Yap:
Joint 6D k-q Space Compressed Sensing for Accelerated High Angular Resolution Diffusion MRI. IPMI 2015: 782-793 - [c14]Evren Özarslan, Muhammet Memiç, Alexandru Vlad Avram, Maryam Afzali, Peter J. Basser, Carl-Fredrik Westin:
Rotating field gradient (RFG) MR offers improved orientational sensitivity. ISBI 2015: 955-958 - [c13]Jian Cheng
, Dinggang Shen, Pew-Thian Yap, Peter J. Basser:
Novel Single and Multiple Shell Uniform Sampling Schemes for Diffusion MRI Using Spherical Codes. MICCAI (1) 2015: 28-36 - [c12]Jian Cheng
, Dinggang Shen, Pew-Thian Yap, Peter J. Basser:
Tensorial Spherical Polar Fourier Diffusion MRI with Optimal Dictionary Learning. MICCAI (1) 2015: 174-182 - [p2]Maher Moakher
, Peter J. Basser:
Fiber Orientation Distribution Functions and Orientation Tensors for Different Material Symmetries. Visualization and Processing of Higher Order Descriptors for Multi-Valued Data 2015: 37-71 - [i1]Cheng Guan Koay, Ping Hong Yeh, John M. Ollinger, M. Okan Irfanoglu, Carlo Pierpaoli, Peter J. Basser, Terrence R. Oakes, Gerard Riedy:
Tract Orientation and Angular Dispersion Deviation Indicator (TOADDI): A framework for single-subject analysis in diffusion tensor imaging. CoRR abs/1510.02934 (2015) - 2014
- [j16]Alexander Cloninger, Wojciech Czaja, Ruiliang Bai, Peter J. Basser:
Solving 2D Fredholm Integral from Incomplete Measurements Using Compressive Sensing. SIAM J. Imaging Sci. 7(3): 1775-1798 (2014) - 2013
- [j15]Alexandru Vlad Avram
, Evren Özarslan
, Joelle E. Sarlls
, Peter J. Basser:
In vivo detection of microscopic anisotropy using quadruple pulsed-field gradient (qPFG) diffusion MRI on a clinical scanner. NeuroImage 64: 229-239 (2013) - [j14]Evren Özarslan
, Cheng Guan Koay, Timothy M. Shepherd, Michal E. Komlosh, M. Okan Irfanoglu, Carlo Pierpaoli, Peter J. Basser:
Mean apparent propagator (MAP) MRI: A novel diffusion imaging method for mapping tissue microstructure. NeuroImage 78: 16-32 (2013) - [j13]Michal E. Komlosh, Evren Özarslan
, M. J. Lizak, I. Horkayne-Szakaly, Raisa Z. Freidlin, F. Horkay, Peter J. Basser:
Mapping average axon diameters in porcine spinal cord white matter and rat corpus callosum using d-PFG MRI. NeuroImage 78: 210-216 (2013) - 2012
- [j12]Evren Özarslan
, Timothy M. Shepherd, Cheng Guan Koay, Stephen J. Blackband, Peter J. Basser:
Temporal scaling characteristics of diffusion as a new MRI contrast: Findings in rat hippocampus. NeuroImage 60(2): 1380-1393 (2012) - 2010
- [j11]Ofer Pasternak, Nir A. Sochen, Peter J. Basser:
The effect of metric selection on the analysis of diffusion tensor MRI data. NeuroImage 49(3): 2190-2204 (2010)
2000 – 2009
- 2009
- [c11]M. Okan Irfanoglu, Cheng Guan Koay, Sinisa Pajevic, Raghu Machiraju, Peter J. Basser:
Diffusion Tensor Field Registration in the Presence of Uncertainty. MICCAI (1) 2009: 181-189 - 2008
- [j10]Cheng Guan Koay, Uri Nevo, Lin-Ching Chang
, Carlo Pierpaoli, Peter J. Basser:
The Elliptical Cone of Uncertainty and Its Normalized Measures in Diffusion Tensor Imaging. IEEE Trans. Medical Imaging 27(6): 834-846 (2008) - 2007
- [j9]Peter J. Basser, Sinisa Pajevic:
Spectral decomposition of a 4th-order covariance tensor: Applications to diffusion tensor MRI. Signal Process. 87(2): 220-236 (2007) - [j8]Cheng Guan Koay, Lin-Ching Chang
, Carlo Pierpaoli, Peter J. Basser:
Error Propagation Framework for Diffusion Tensor Imaging via Diffusion Tensor Representations. IEEE Trans. Medical Imaging 26(8): 1017-1034 (2007) - [j7]Cheng Guan Koay, Lin-Ching Chang
, Carlo Pierpaoli, Peter J. Basser:
Erratum to "Error Propagation Framework for Diffusion Tensor Imaging via Diffusion Tensor Representations". IEEE Trans. Medical Imaging 26(10): 1424-1424 (2007) - [j6]Raisa Z. Freidlin, Evren Özarslan
, Michal E. Komlosh, Lin-Ching Chang
, Cheng Guan Koay, Derek K. Jones
, Peter J. Basser:
Parsimonious Model Selection for Tissue Segmentation and Classification Applications: A Study Using Simulated and Experimental DTI Data. IEEE Trans. Medical Imaging 26(11): 1576-1584 (2007) - [c10]Raisa Z. Freidlin, Yaniv Assaf, Peter J. Basser:
Multivariate Hypothesis Testing of Dti Data for Tissue Clustering. ISBI 2007: 776-779 - [c9]Raisa Z. Freidlin, Michal E. Komlosh, Murray H. Loew, Peter J. Basser:
Parsimonious model selection for tissue classification: a DTI study of zebrafish. Medical Imaging: Image Processing 2007: 65122T - 2006
- [c8]Evren Özarslan
, Peter J. Basser, Timothy M. Shepherd, Peter E. Thelwall, Baba C. Vemuri, Stephen J. Blackband:
Characterization of Anomalous Diffusion from MR Signal may be a New Probe to Tissue Microstructure. EMBC 2006: 2256-2259 - [c7]Valery Pickalov, Peter J. Basser:
3-D tomographic reconstruction of the average propagator from MRI data. ISBI 2006: 710-713 - [p1]Sinisa Pajevic, Akram Aldroubi
, Peter J. Basser:
Continuous Tensor Field Approximation of Diffusion Tensor MRI data. Visualization and Processing of Tensor Fields 2006: 299-314 - 2005
- [j5]Gustavo K. Rohde, Alan S. Barnett, Peter J. Basser, Carlo Pierpaoli:
Estimating intensity variance due to noise in registered images: Applications to diffusion tensor MRI. NeuroImage 26(3): 673-684 (2005) - [j4]Yaniv Assaf, Peter J. Basser:
Composite hindered and restricted model of diffusion (CHARMED) MR imaging of the human brain. NeuroImage 27(1): 48-58 (2005) - [c6]Gustavo Kunde Rohde, Alan S. Barnett, Peter J. Basser, Carlo Pierpaoli:
Estimating intensity variance due to noise in registered images. Medical Imaging: Image Processing 2005 - 2003
- [j3]Pedro Cavaleiro Miranda, Mark Hallett, Peter J. Basser:
The electric field induced in the brain by magnetic stimulation: a 3-D finite-element analysis of the effect of tissue heterogeneity and anisotropy. IEEE Trans. Biomed. Eng. 50(9): 1074-1085 (2003) - [j2]Peter J. Basser, Sinisa Pajevic:
A Normal Distribution for Tensor-valued Random Variables: Applications to Diffusion Tensor MRI. IEEE Trans. Medical Imaging 22(7): 785-794 (2003) - [c5]Gustavo K. Rohde, Sinisa Pajevic, Carlo Pierpaoli, Peter J. Basser:
A Comprehensive Approach for Multi-channel Image Registration. WBIR 2003: 214-223 - 2002
- [c4]Peter J. Basser, Sinisa Pajevic:
A normal distribution for tensor-valued random variables to analyze diffusion tensor MRI data. ISBI 2002: 927-930 - 2001
- [j1]Daniel C. Alexander
, Carlo Pierpaoli, Peter J. Basser, James C. Gee:
Spatial Transformations of Diffusion Tensor Magnetic Resonance Images. IEEE Trans. Medical Imaging 20(11): 1131-1139 (2001) - [c3]Song Zhang, Çagatay Demiralp, M. DaSilva, Daniel F. Keefe, David H. Laidlaw, Benjamin D. Greenberg, Peter J. Basser, Carlo Pierpaoli, E. A. Chiocca, Thomas S. Deisboeck:
Toward Application of Virtual Reality to Visualization of DT-MRI Volumes. MICCAI 2001: 1406-1408 - [c2]Song Zhang, Çagatay Demiralp, Daniel F. Keefe, M. DaSilva, David H. Laidlaw, Benjamin D. Greenberg, Peter J. Basser, Carlo Pierpaoli, E. A. Chiocca, Thomas S. Deisboeck:
An Immersive Virtual Environment for DT-MRI Volume Visualization Applications: A Case Study. IEEE Visualization 2001: 437-440 - 2000
- [c1]Daniel C. Alexander
, Carlo Pierpaoli, Peter J. Basser, James C. Gee:
Techniques for spatial normalization of diffusion tensor images. Medical Imaging: Image Processing 2000
Coauthor Index
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