default search action
Google
Google Scholar
Semantic Scholar
Internet Archive Scholar
CiteSeerX
ORCIDMarcel H. Schulz
Person information
- affiliation: Max Planck Institute for Informatics
- affiliation: Carnegie Mellon University, Lane Center for Computational Biology
- affiliation: Max Planck Institute for Molecular Genetics
Refine list
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
2020 – today
- 2023
[j28]Dennis Hecker
, Fatemeh Behjati-Ardakani, Alexander Karollus, Julien Gagneur, Marcel H. Schulz:
The adapted Activity-By-Contact model for enhancer-gene assignment and its application to single-cell data. Bioinform. 39(2) (2023)- [c5]Sascha Schmalhofer, Marwin Möller, Nikoletta Katsaouni, Marcel H. Schulz, Lars Hedrich:
Debugging Low Power Analog Neural Networks for Edge Computing. DATE 2023: 1-2 - 2022
- [j27]Nikoletta Katsaouni, Florian Aul, Lukas Krischker, Sascha Schmalhofer, Lars Hedrich, Marcel H. Schulz:
Energy efficient convolutional neural networks for arrhythmia detection. Array 13: 100127 (2022) - [j26]Timothy Warwick, Sandra Seredinski, Nina M. Krause, Jasleen Kaur Bains, Lara Althaus, James A Oo, Alessandro Bonetti, Anne Dueck, Stefan Engelhardt, Harald Schwalbe, Matthias S. Leisegang, Marcel H. Schulz, Ralf P. Brandes:
A universal model of RNA.DNA: DNA triplex formation accurately predicts genome-wide RNA-DNA interactions. Briefings Bioinform. 23(6) (2022) - 2021
- [j25]Peter Ebert, Marcel H. Schulz:
Fast detection of differential chromatin domains with SCIDDO. Bioinform. 37(9): 1198-1205 (2021) - [j24]Michael Scherer, Florian Schmidt, Olga Lazareva, Jörn Walter, Jan Baumbach, Marcel H. Schulz, Markus List:
Machine learning for deciphering cell heterogeneity and gene regulation. Nat. Comput. Sci. 1(3): 183-191 (2021) - [j23]Beatriz Serrano-Solano, Melanie Christine Föll, Cristóbal Gallardo-Alba, Anika Erxleben, Helena Rasche, Saskia D. Hiltemann, Matthias Fahrner, Mark J. Dunning, Marcel H. Schulz, Beáta Scholtz, Dave Clements, Anton Nekrutenko, Bérénice Batut, Björn A. Grüning:
Fostering accessible online education using Galaxy as an e-learning platform. PLoS Comput. Biol. 17(5) (2021) - 2020
- [j22]Nina Baumgarten, Florian Schmidt, Marcel H. Schulz:
Improved linking of motifs to their TFs using domain information. Bioinform. 36(6): 1655-1662 (2020) - [j21]Shounak Chakraborty, Stefan Canzar, Tobias Marschall, Marcel H. Schulz:
Chromatyping: Reconstructing Nucleosome Profiles from NOMe Sequencing Data. J. Comput. Biol. 27(3): 330-341 (2020) - [j20]Nina Baumgarten, Dennis Hecker, Sivarajan Karunanithi, Florian Schmidt, Markus List, Marcel H. Schulz:
EpiRegio: analysis and retrieval of regulatory elements linked to genes. Nucleic Acids Res. 48(Webserver-Issue): W193-W199 (2020)
2010 – 2019
- 2019
- [j19]Florian Schmidt, Marcel H. Schulz:
On the problem of confounders in modeling gene expression. Bioinform. 35(4): 711-719 (2019) - [j18]Florian Schmidt, Fabian Kern, Peter Ebert, Nina Baumgarten, Marcel H. Schulz:
TEPIC 2 - an extended framework for transcription factor binding prediction and integrative epigenomic analysis. Bioinform. 35(9): 1608-1609 (2019) - [j17]Markus List, Azim Dehghani Amirabad, Dennis Kostka, Marcel H. Schulz:
Large-scale inference of competing endogenous RNA networks with sparse partial correlation. Bioinform. 35(14): i596-i604 (2019) - 2018
- [j16]Andrea Hornáková, Markus List, Jilles Vreeken, Marcel H. Schulz:
JAMI: fast computation of conditional mutual information for ceRNA network analysis. Bioinform. 34(17): 3050-3051 (2018) - [j15]Florian Schmidt, Markus List, Engin Cukuroglu, Sebastian Köhler, Jonathan Göke, Marcel H. Schulz:
An ontology-based method for assessing batch effect adjustment approaches in heterogeneous datasets. Bioinform. 34(17): i908-i916 (2018) - [j14]Dilip A. Durai, Marcel H. Schulz:
In silico read normalization using set multi-cover optimization. Bioinform. 34(19): 3273-3280 (2018) - [c4]Shounak Chakraborty, Stefan Canzar, Tobias Marschall, Marcel H. Schulz:
Chromatyping: Reconstructing Nucleosome Profiles from NOMe Sequencing Data. RECOMB 2018: 21-36 - [i2]Fatemeh Behjati-Ardakani, Florian Schmidt, Marcel H. Schulz:
Predicting transcription factor binding using ensemble random forest models. F1000Research 7: 1603 (2018) - 2017
- [j13]Tim Kehl, Lara Schneider, Florian Schmidt, Daniel Stöckel, Nico Gerstner, Christina Backes, Eckart Meese, Andreas Keller, Marcel H. Schulz, Hans-Peter Lenhof:
RegulatorTrail: a web service for the identification of key transcriptional regulators. Nucleic Acids Res. 45(Webserver-Issue): W146-W153 (2017) - [p2]Marcel H. Schulz, Ziv Bar-Joseph:
Probabilistic Models for Error Correction of Nonuniform Sequencing Data. Algorithms for Next-Generation Sequencing Data 2017: 131-145 - [p1]David Weese, Marcel H. Schulz, Hugues Richard:
DNA-Seq Error Correction Based on Substring Indices. Algorithms for Next-Generation Sequencing Data 2017: 147-166 - 2016
- [j12]Dilip A. Durai, Marcel H. Schulz:
Informed kmer selection for de novo transcriptome assembly. Bioinform. 32(11): 1670-1677 (2016) - [i1]Azim Dehghani Amirabad, Marcel H. Schulz:
Multitask regression for condition-specific prioritization of miRNA targets in transcripts. PeerJ Prepr. 4: e2377 (2016) - 2015
- [j11]Peter Ebert, Fabian Müller, Karl Nordström, Thomas Lengauer, Marcel H. Schulz:
A general concept for consistent documentation of computational analyses. Database J. Biol. Databases Curation 2015 (2015) - 2014
- [j10]Marcel H. Schulz, David Weese, Manuel Holtgrewe, Viktoria Dimitrova, Sijia Niu, Knut Reinert, Hugues Richard:
Fiona: a parallel and automatic strategy for read error correction. Bioinform. 30(17): 356-363 (2014) - 2012
- [j9]Anne-Katrin Emde, Marcel H. Schulz, David Weese, Ruping Sun, Martin Vingron, Vera M. Kalscheuer, Stefan A. Haas, Knut Reinert:
Detecting genomic indel variants with exact breakpoints in single- and paired-end sequencing data using SplazerS. Bioinform. 28(5): 619-627 (2012) - [j8]Jonathan Göke, Marcel H. Schulz, Julia Lasserre, Martin Vingron:
Estimation of pairwise sequence similarity of mammalian enhancers with word neighbourhood counts. Bioinform. 28(5): 656-663 (2012) - [j7]Marcel H. Schulz, Daniel R. Zerbino, Martin Vingron, Ewan Birney:
Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels. Bioinform. 28(8): 1086-1092 (2012) - [j6]Sebastian Bauer, Sebastian Köhler, Marcel H. Schulz, Peter N. Robinson:
Bayesian ontology querying for accurate and noise-tolerant semantic searches. Bioinform. 28(19): 2502-2508 (2012) - [j5]Marcel H. Schulz, William E. Devanny, Anthony Gitter, Shan Zhong, Jason Ernst, Ziv Bar-Joseph:
DREM 2.0: Improved reconstruction of dynamic regulatory networks from time-series expression data. BMC Syst. Biol. 6: 104 (2012) - 2011
- [j4]Peter Huggins, Shan Zhong, Idit Shiff, Rachel Beckerman, Oleg Laptenko, Carol Prives, Marcel H. Schulz, Itamar Simon, Ziv Bar-Joseph:
DECOD: fast and accurate discriminative DNA motif finding. Bioinform. 27(17): 2361-2367 (2011) - [j3]Marcel H. Schulz, Sebastian Köhler, Sebastian Bauer, Peter N. Robinson:
Exact score distribution computation for ontological similarity searches. BMC Bioinform. 12: 441 (2011)
2000 – 2009
- 2009
- [j2]Kai Ye, Marcel H. Schulz, Quan Long, Rolf Apweiler, Zemin Ning:
Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads. Bioinform. 25(21): 2865-2871 (2009) - [c3]Marcel H. Schulz, Sebastian Köhler, Sebastian Bauer, Martin Vingron, Peter N. Robinson:
Exact Score Distribution Computation for Similarity Searches in Ontologies. WABI 2009: 298-309 - 2008
- [j1]Marcel H. Schulz, Sebastian Bauer, Peter N. Robinson:
The generalised k-Truncated Suffix Tree for time-and space-efficient searches in multiple DNA or protein sequences. Int. J. Bioinform. Res. Appl. 4(1): 81-95 (2008) - [c2]David Weese, Marcel H. Schulz:
Efficient String Mining under Constraints Via the Deferred Frequency Index. ICDM 2008: 374-388 - [c1]Marcel H. Schulz, David Weese, Tobias Rausch, Andreas Döring, Knut Reinert, Martin Vingron:
Fast and Adaptive Variable Order Markov Chain Construction. WABI 2008: 306-317
Coauthor Index
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from 
to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the 
of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from 
, 
, and 
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from 
.
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2025-01-20 23:04 CET by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by:
