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Robert M. Kirby
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- affiliation: University of Utah, Salt Lake City, UT, USA
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2020 – today
- 2024
- [j112]Khemraj Shukla
, Vivek Oommen
, Ahmad Peyvan, Michael Penwarden, Nicholas Plewacki, Luis Bravo, Anindya Ghoshal, Robert M. Kirby, George Em Karniadakis:
Deep neural operators as accurate surrogates for shape optimization. Eng. Appl. Artif. Intell. 129: 107615 (2024) - [j111]Ashok Jallepalli
, Marshall C. Galbraith, Robert Haimes, Robert M. Kirby:
Non-uniform knot (NUK) SIAC post-processing of flow fields produced through unstructured grid adaptation and optimization. J. Comput. Phys. 514: 113238 (2024) - [j110]Timbwoga A. J. Ouermi
, Robert M. Kirby
, Martin Berzins
:
Algorithm 1041: HiPPIS - A High-order Positivity-preserving Mapping Software for Structured Meshes. ACM Trans. Math. Softw. 50(1): 8:1-8:31 (2024) - [c82]Da Long, Wei W. Xing, Aditi S. Krishnapriyan, Robert M. Kirby, Shandian Zhe, Michael W. Mahoney:
Equation Discovery with Bayesian Spike-and-Slab Priors and Efficient Kernels. AISTATS 2024: 2413-2421 - [c81]Shibo Li, Xin Yu, Wei W. Xing, Robert M. Kirby, Akil Narayan, Shandian Zhe:
Multi-Resolution Active Learning of Fourier Neural Operators. AISTATS 2024: 2440-2448 - [c80]Shikai Fang, Xin Yu, Zheng Wang, Shibo Li, Mike Kirby, Shandian Zhe:
Functional Bayesian Tucker Decomposition for Continuous-indexed Tensor Data. ICLR 2024 - [c79]Shikai Fang, Madison Cooley, Da Long, Shibo Li, Mike Kirby, Shandian Zhe:
Solving High Frequency and Multi-Scale PDEs with Gaussian Processes. ICLR 2024 - [i61]Michael Penwarden, Houman Owhadi, Robert M. Kirby:
Kolmogorov n-Widths for Multitask Physics-Informed Machine Learning (PIML) Methods: Towards Robust Metrics. CoRR abs/2402.11126 (2024) - [i60]Madison Cooley, Shandian Zhe, Robert M. Kirby, Varun Shankar:
Polynomial-Augmented Neural Networks (PANNs) with Weak Orthogonality Constraints for Enhanced Function and PDE Approximation. CoRR abs/2406.02336 (2024) - [i59]Zachary Bastiani, Robert M. Kirby, Jacob D. Hochhalter, Shandian Zhe:
Complexity-Aware Deep Symbolic Regression with Robust Risk-Seeking Policy Gradients. CoRR abs/2406.06751 (2024) - 2023
- [j109]Ben Charoenwong
, Robert M. Kirby, Jonathan Reiter
:
Computer Science Abstractions to Help Reason About Decentralized Stablecoin Design. IEEE Access 11: 103201-103213 (2023) - [j108]Michael Penwarden, Shandian Zhe, Akil Narayan, Robert M. Kirby:
A metalearning approach for Physics-Informed Neural Networks (PINNs): Application to parameterized PDEs. J. Comput. Phys. 477: 111912 (2023) - [j107]Vidhi Zala
, Akil Narayan, Robert M. Kirby:
Convex optimization-based structure-preserving filter for multidimensional finite element simulations. J. Comput. Phys. 492: 112364 (2023) - [j106]Michael Penwarden
, Ameya D. Jagtap, Shandian Zhe, George Em Karniadakis, Robert M. Kirby:
A unified scalable framework for causal sweeping strategies for Physics-Informed Neural Networks (PINNs) and their temporal decompositions. J. Comput. Phys. 493: 112464 (2023) - [j105]T. A. J. Ouermi
, Robert M. Kirby, Martin Berzins:
ENO-based high-order data-bounded and constrained positivity-preserving interpolation. Numer. Algorithms 92(3): 1517-1551 (2023) - [c78]Shibo Li, Zheng Wang, Akil Narayan, Robert M. Kirby, Shandian Zhe:
Meta-Learning with Adjoint Methods. AISTATS 2023: 7239-7251 - [c77]Ben Charoenwong, Robert M. Kirby, Jonathan Reiter
:
Risk-Free Interest Rates in Decentralized Finance. BCCA 2023: 466-473 - [c76]Shashank Subramanian, Robert M. Kirby, Michael W. Mahoney, Amir Gholami:
Adaptive Self-Supervision Algorithms for Physics-Informed Neural Networks. ECAI 2023: 2234-2241 - [c75]Shibo Li, Michael Penwarden, Yiming Xu, Conor Tillinghast, Akil Narayan, Mike Kirby, Shandian Zhe:
Meta Learning of Interface Conditions for Multi-Domain Physics-Informed Neural Networks. ICML 2023: 19855-19881 - [c74]Shikai Fang, Xin Yu, Shibo Li, Zheng Wang, Mike Kirby, Shandian Zhe:
Streaming Factor Trajectory Learning for Temporal Tensor Decomposition. NeurIPS 2023 - [i58]Khemraj Shukla
, Vivek Oommen, Ahmad Peyvan, Michael Penwarden, Luis Bravo, Anindya Ghoshal, Robert M. Kirby, George Em Karniadakis:
Deep neural operators can serve as accurate surrogates for shape optimization: A case study for airfoils. CoRR abs/2302.00807 (2023) - [i57]Hongsup Oh, Roman Amici, Geoffrey F. Bomarito, Shandian Zhe, Robert M. Kirby, Jacob D. Hochhalter:
Genetic Programming Based Symbolic Regression for Analytical Solutions to Differential Equations. CoRR abs/2302.03175 (2023) - [i56]Michael Penwarden, Ameya D. Jagtap, Shandian Zhe, George Em Karniadakis, Robert M. Kirby:
A unified scalable framework for causal sweeping strategies for Physics-Informed Neural Networks (PINNs) and their temporal decompositions. CoRR abs/2302.14227 (2023) - [i55]Haocheng Dai, Michael Penwarden, Robert M. Kirby, Sarang C. Joshi:
Neural Operator Learning for Ultrasound Tomography Inversion. CoRR abs/2304.03297 (2023) - [i54]Shibo Li, Xin Yu, Wei W. Xing, Mike Kirby, Akil Narayan, Shandian Zhe:
Multi-Resolution Active Learning of Fourier Neural Operators. CoRR abs/2309.16971 (2023) - [i53]Da Long, Wei W. Xing
, Aditi S. Krishnapriyan, Robert M. Kirby, Shandian Zhe, Michael W. Mahoney:
Equation Discovery with Bayesian Spike-and-Slab Priors and Efficient Kernels. CoRR abs/2310.05387 (2023) - [i52]Timbwaoga A. J. Ouermi, Robert M. Kirby, Martin Berzins:
Algorithm xxxx: HiPPIS A High-Order Positivity-Preserving Mapping Software for Structured Meshes. CoRR abs/2310.08818 (2023) - [i51]Shikai Fang, Xin Yu, Shibo Li, Zheng Wang, Robert M. Kirby, Shandian Zhe:
Streaming Factor Trajectory Learning for Temporal Tensor Decomposition. CoRR abs/2310.17021 (2023) - [i50]Shikai Fang, Madison Cooley, Da Long, Shibo Li, Robert M. Kirby, Shandian Zhe:
Solving High Frequency and Multi-Scale PDEs with Gaussian Processes. CoRR abs/2311.04465 (2023) - [i49]Shikai Fang, Xin Yu, Zheng Wang, Shibo Li, Mike Kirby, Shandian Zhe:
Functional Bayesian Tucker Decomposition for Continuous-indexed Tensor Data. CoRR abs/2311.04829 (2023) - 2022
- [j104]Michael Penwarden
, Shandian Zhe, Akil Narayan, Robert M. Kirby:
Multifidelity modeling for Physics-Informed Neural Networks (PINNs). J. Comput. Phys. 451: 110844 (2022) - [j103]Edward Laughton
, Vidhi Zala, Akil Narayan, Robert M. Kirby, David Moxey
:
Fast Barycentric-Based Evaluation Over Spectral/hp Elements. J. Sci. Comput. 90(2): 78 (2022) - [j102]Yiming Xu
, Vahid Keshavarzzadeh, Robert M. Kirby, Akil Narayan
:
A Bandit-Learning Approach to Multifidelity Approximation. SIAM J. Sci. Comput. 44(1): 150- (2022) - [j101]Nghia Truong
, Cem Yuksel
, Chakrit Watcharopas, Joshua A. Levine
, Robert M. Kirby:
Particle Merging-and-Splitting. IEEE Trans. Vis. Comput. Graph. 28(12): 4546-4557 (2022) - [c73]Zheng Wang, Wei W. Xing, Robert M. Kirby, Shandian Zhe:
Physics Informed Deep Kernel Learning. AISTATS 2022: 1206-1218 - [c72]Shibo Li, Zheng Wang, Robert M. Kirby, Shandian Zhe:
Deep Multi-Fidelity Active Learning of High-Dimensional Outputs. AISTATS 2022: 1694-1711 - [c71]Shikai Fang, Akil Narayan, Robert M. Kirby, Shandian Zhe:
Bayesian Continuous-Time Tucker Decomposition. ICML 2022: 6235-6245 - [c70]Shibo Li, Robert M. Kirby, Shandian Zhe:
Decomposing Temporal High-Order Interactions via Latent ODEs. ICML 2022: 12797-12812 - [c69]Da Long, Zheng Wang, Aditi S. Krishnapriyan, Robert M. Kirby, Shandian Zhe, Michael W. Mahoney:
AutoIP: A United Framework to Integrate Physics into Gaussian Processes. ICML 2022: 14210-14222 - [c68]Han D. Tran, Milinda Fernando, Kumar Saurabh, Baskar Ganapathysubramanian, Robert M. Kirby, Hari Sundar:
A scalable adaptive-matrix SPMV for heterogeneous architectures. IPDPS 2022: 13-24 - [c67]Tan Minh Nguyen, Richard G. Baraniuk, Robert M. Kirby, Stanley J. Osher, Bao Wang:
Momentum Transformer: Closing the Performance Gap Between Self-attention and Its Linearization. MSML 2022: 189-204 - [c66]Shibo Li, Zheng Wang, Robert M. Kirby, Shandian Zhe:
Infinite-Fidelity Coregionalization for Physical Simulation. NeurIPS 2022 - [c65]Shibo Li, Jeff M. Phillips, Xin Yu, Robert M. Kirby, Shandian Zhe:
Batch Multi-Fidelity Active Learning with Budget Constraints. NeurIPS 2022 - [i48]Vahid Keshavarzzadeh, Shandian Zhe, Robert M. Kirby, Akil Narayan:
GP-HMAT: Scalable, O(n log(n)) Gaussian Process Regression with Hierarchical Low-Rank Matrices. CoRR abs/2201.00888 (2022) - [i47]Marta D'Elia, Hang Deng, Cedric G. Fraces, Krishna C. Garikipati, Lori Graham-Brady, Amanda A. Howard, George Em Karniadakis, Vahid Keshavarzzadeh, Robert M. Kirby, J. Nathan Kutz, Chunhui Li
, Xing Liu, Hannah Lu, Pania Newell, Daniel O'Malley, Masa Prodanovic, Gowri Srinivasan, Alexandre M. Tartakovsky, Daniel M. Tartakovsky, Hamdi A. Tchelepi, Bozo Vazic, Hari S. Viswanathan, Hongkyu Yoon, Piotr Zarzycki:
Machine Learning in Heterogeneous Porous Materials. CoRR abs/2202.04137 (2022) - [i46]Da Long, Zheng Wang, Aditi S. Krishnapriyan, Robert M. Kirby, Shandian Zhe, Michael W. Mahoney:
AutoIP: A United Framework to Integrate Physics into Gaussian Processes. CoRR abs/2202.12316 (2022) - [i45]Vidhi Zala, Akil Narayan, Robert M. Kirby:
Convex Optimization-Based Structure-Preserving Filter For Multidimensional Finite Element Simulations. CoRR abs/2203.09748 (2022) - [i44]Jarom D. Hogue, Robert M. Kirby, Akil Narayan:
Dimensionality Reduction in Deep Learning via Kronecker Multi-layer Architectures. CoRR abs/2204.04273 (2022) - [i43]Timbwaoga A. J. Ouermi, Robert M. Kirby, Martin Berzins:
ENO-Based High-Order Data-Bounded and Constrained Positivity-Preserving Interpolation. CoRR abs/2204.06168 (2022) - [i42]Shibo Li, Zheng Wang, Robert M. Kirby, Shandian Zhe:
Infinite-Fidelity Coregionalization for Physical Simulation. CoRR abs/2207.00678 (2022) - [i41]Shashank Subramanian, Robert M. Kirby, Michael W. Mahoney, Amir Gholami:
Adaptive Self-supervision Algorithms for Physics-informed Neural Networks. CoRR abs/2207.04084 (2022) - [i40]Tan M. Nguyen, Richard G. Baraniuk, Robert M. Kirby, Stanley J. Osher, Bao Wang:
Momentum Transformer: Closing the Performance Gap Between Self-attention and Its Linearization. CoRR abs/2208.00579 (2022) - [i39]Shibo Li, Michael Penwarden, Robert M. Kirby, Shandian Zhe:
Meta Learning of Interface Conditions for Multi-Domain Physics-Informed Neural Networks. CoRR abs/2210.12669 (2022) - [i38]Shibo Li, Jeff M. Phillips, Xin Yu, Robert M. Kirby, Shandian Zhe:
Batch Multi-Fidelity Active Learning with Budget Constraints. CoRR abs/2210.12704 (2022) - 2021
- [j100]Vahid Keshavarzzadeh, Mitra Alirezaei, Tolga Tasdizen, Robert M. Kirby:
Image-Based Multiresolution Topology Optimization Using Deep Disjunctive Normal Shape Model. Comput. Aided Des. 130: 102947 (2021) - [j99]Max Carlson, Xiaoning Zheng, Hari Sundar, George Em Karniadakis, Robert M. Kirby:
An open-source parallel code for computing the spectral fractional Laplacian on 3D complex geometry domains. Comput. Phys. Commun. 261: 107695 (2021) - [j98]Wei W. Xing
, Robert M. Kirby, Shandian Zhe
:
Deep coregionalization for the emulation of simulation-based spatial-temporal fields. J. Comput. Phys. 428: 109984 (2021) - [j97]Vahid Keshavarzzadeh, Robert M. Kirby, Akil Narayan
:
Multilevel Designed Quadrature for Partial Differential Equations with Random Inputs. SIAM J. Sci. Comput. 43(2): A1412-A1440 (2021) - [j96]Vidhi Zala, Robert M. Kirby, Akil Narayan
:
Structure-Preserving Nonlinear Filtering for Continuous and Discontinuous Galerkin Spectral/hp Element Methods. SIAM J. Sci. Comput. 43(6): A3713-A3732 (2021) - [j95]Valerio Pascucci, Mike Kirby:
Message from VIS 2020 General Chairs. IEEE Trans. Vis. Comput. Graph. 27(2): xvii (2021) - [j94]Harsh Bhatia
, Robert M. Kirby, Valerio Pascucci
, Peer-Timo Bremer
:
Vector Field Decompositions Using Multiscale Poisson Kernel. IEEE Trans. Vis. Comput. Graph. 27(9): 3781-3793 (2021) - [c64]Zheng Wang, Wei W. Xing, Robert Michael Kirby, Shandian Zhe:
Multi-Fidelity High-Order Gaussian Processes for Physical Simulation. AISTATS 2021: 847-855 - [c63]Majid Rasouli, Robert M. Kirby, Hari Sundar:
A Compressed, Divide and Conquer Algorithm for Scalable Distributed Matrix-Matrix Multiplication. HPC Asia 2021: 110-119 - [c62]Harsh Bhatia, Steve Petruzza
, Rushil Anirudh, Attila Gyulassy, Robert M. Kirby, Valerio Pascucci
, Peer-Timo Bremer:
Data-Driven Estimation of Temporal-Sampling Errors in Unsteady Flows. ISVC (1) 2021: 235-248 - [c61]Shibo Li, Robert M. Kirby, Shandian Zhe:
Batch Multi-Fidelity Bayesian Optimization with Deep Auto-Regressive Networks. NeurIPS 2021: 25463-25475 - [c60]Aditi S. Krishnapriyan, Amir Gholami, Shandian Zhe, Robert M. Kirby, Michael W. Mahoney:
Characterizing possible failure modes in physics-informed neural networks. NeurIPS 2021: 26548-26560 - [c59]Shikai Fang, Robert M. Kirby, Shandian Zhe:
Bayesian streaming sparse Tucker decomposition. UAI 2021: 558-567 - [i37]Mani Razi, Robert M. Kirby, Akil Narayan:
Kernel optimization for Low-Rank Multi-Fidelity Algorithms. CoRR abs/2101.01769 (2021) - [i36]Edward Laughton, Vidhi Zala, Akil Narayan, Robert M. Kirby, David Moxey:
Fast Barycentric-Based Evaluation Over Spectral/hp Elements. CoRR abs/2103.03594 (2021) - [i35]Yiming Xu, Vahid Keshavarzzadeh, Robert M. Kirby, Akil Narayan:
A bandit-learning approach to multifidelity approximation. CoRR abs/2103.15342 (2021) - [i34]Wei W. Xing, Akeel A. Shah, Peng Wang, Shandian Zhe, Qian Fu, Robert M. Kirby:
Residual Gaussian Process: A Tractable Nonparametric Bayesian Emulator for Multi-fidelity Simulations. CoRR abs/2104.03743 (2021) - [i33]M. Keith Ballard, Roman Amici, Varun Shankar, Lauren A. Ferguson, Michael Braginsky, Robert M. Kirby:
Towards an Extrinsic, CG-XFEM Approach Based on Hierarchical Enrichments for Modeling Progressive Fracture. CoRR abs/2104.14704 (2021) - [i32]Vidhi Zala, Robert M. Kirby, Akil Narayan:
Structure-preserving Nonlinear Filtering for Continuous and Discontinuous Galerkin Spectral/hp Element Methods. CoRR abs/2106.08316 (2021) - [i31]Shibo Li, Robert M. Kirby, Shandian Zhe:
Batch Multi-Fidelity Bayesian Optimization with Deep Auto-Regressive Networks. CoRR abs/2106.09884 (2021) - [i30]Michael Penwarden, Shandian Zhe, Akil Narayan, Robert M. Kirby:
Multifidelity Modeling for Physics-Informed Neural Networks (PINNs). CoRR abs/2106.13361 (2021) - [i29]Nghia Truong, Cem Yuksel, Chakrit Watcharopas, Joshua A. Levine, Robert M. Kirby:
Particle Merging-and-Splitting. CoRR abs/2107.08093 (2021) - [i28]Aditi S. Krishnapriyan, Amir Gholami, Shandian Zhe, Robert M. Kirby, Michael W. Mahoney:
Characterizing possible failure modes in physics-informed neural networks. CoRR abs/2109.01050 (2021) - [i27]Shibo Li, Zheng Wang, Akil Narayan, Robert Michael Kirby, Shandian Zhe:
Meta-Learning with Adjoint Methods. CoRR abs/2110.08432 (2021) - [i26]Michael Penwarden, Shandian Zhe, Akil Narayan, Robert M. Kirby:
Physics-Informed Neural Networks (PINNs) for Parameterized PDEs: A Metalearning Approach. CoRR abs/2110.13361 (2021) - 2020
- [j93]David Moxey
, Chris D. Cantwell, Yan Bao
, Andrea Cassinelli
, Giacomo Castiglioni
, Sehun Chun
, Emilia Juda, Ehsan Kazemi, Kilian Lackhove, Julian Marcon
, Gianmarco Mengaldo, Douglas Serson
, Michael Turner, Hui Xu, Joaquim Peiró, Robert M. Kirby, Spencer J. Sherwin
:
Nektar++: Enhancing the capability and application of high-fidelity spectral/hp element methods. Comput. Phys. Commun. 249: 107110 (2020) - [j92]Vahid Keshavarzzadeh
, Robert M. Kirby, Akil Narayan
:
Generation of nested quadrature rules for generic weight functions via numerical optimization: Application to sparse grids. J. Comput. Phys. 400 (2020) - [j91]David Moxey
, Roman Amici, Mike Kirby:
Efficient Matrix-Free High-Order Finite Element Evaluation for Simplicial Elements. SIAM J. Sci. Comput. 42(3): C97-C123 (2020) - [j90]Vidhi Zala
, Mike Kirby, Akil Narayan
:
Structure-Preserving Function Approximation via Convex Optimization. SIAM J. Sci. Comput. 42(5): A3006-A3029 (2020) - [j89]Ashok Jallepalli, Joshua A. Levine, Robert M. Kirby:
The Effect of Data Transformations on Scalar Field Topological Analysis of High-Order FEM Solutions. IEEE Trans. Vis. Comput. Graph. 26(1): 162-172 (2020) - [c58]Wei W. Xing
, Shireen Y. Elhabian, Robert Michael Kirby, Ross T. Whitaker, Shandian Zhe:
Infinite ShapeOdds: Nonparametric Bayesian Models for Shape Representations. AAAI 2020: 6462-6469 - [c57]Max Carlson, Robert M. Kirby, Hari Sundar:
A scalable framework for solving fractional diffusion equations. ICS 2020: 2:1-2:11 - [c56]Shibo Li, Wei W. Xing
, Robert M. Kirby, Shandian Zhe:
Scalable Gaussian Process Regression Networks. IJCAI 2020: 2456-2462 - [c55]Shibo Li, Wei W. Xing, Robert M. Kirby, Shandian Zhe:
Multi-Fidelity Bayesian Optimization via Deep Neural Networks. NeurIPS 2020 - [i25]Shibo Li, Wei W. Xing, Mike Kirby, Shandian Zhe:
Scalable Variational Gaussian Process Regression Networks. CoRR abs/2003.11489 (2020) - [i24]Zheng Wang, Wei W. Xing
, Robert Michael Kirby, Shandian Zhe:
Multi-Fidelity High-Order Gaussian Processes for Physical Simulation. CoRR abs/2006.04972 (2020) - [i23]Zheng Wang, Wei W. Xing, Robert Michael Kirby, Shandian Zhe:
Physics Regularized Gaussian Processes. CoRR abs/2006.04976 (2020) - [i22]Shibo Li, Wei W. Xing
, Mike Kirby, Shandian Zhe:
Multi-Fidelity Bayesian Optimization via Deep Neural Networks. CoRR abs/2007.03117 (2020) - [i21]Vidhi Zala, Robert M. Kirby, Akil Narayan:
Structure-preserving function approximation via convex optimization. CoRR abs/2008.08223 (2020) - [i20]T. A. J. Ouermi, Robert M. Kirby, Martin Berzins:
Numerical Testing of a New Positivity-Preserving Interpolation Algorithm. CoRR abs/2009.08535 (2020) - [i19]Shibo Li, Robert M. Kirby, Shandian Zhe:
Deep Multi-Fidelity Active Learning of High-dimensional Outputs. CoRR abs/2012.00901 (2020) - [i18]Daniel J. Perry, Vahid Keshavarzzadeh, Shireen Y. Elhabian, Robert M. Kirby, Michael Gleicher, Ross T. Whitaker:
Visualization of topology optimization designs with representative subset selection. CoRR abs/2012.14901 (2020)
2010 – 2019
- 2019
- [j88]Mani Razi, Robert M. Kirby, Akil Narayan
:
Fast predictive multi-fidelity prediction with models of quantized fidelity levels. J. Comput. Phys. 376: 992-1008 (2019) - [j87]Martin Vymazal, David Moxey
, Chris D. Cantwell
, Spencer J. Sherwin
, Robert M. Kirby:
On weak Dirichlet boundary conditions for elliptic problems in the continuous Galerkin method. J. Comput. Phys. 394: 732-744 (2019) - [j86]David Moxey
, Shankar P. Sastry, Robert M. Kirby:
Interpolation Error Bounds for Curvilinear Finite Elements and Their Implications on Adaptive Mesh Refinement. J. Sci. Comput. 78(2): 1045-1062 (2019) - [j85]Ashok Jallepalli
, Robert Haimes, Robert M. Kirby:
Adaptive Characteristic Length for L-SIAC Filtering of FEM Data. J. Sci. Comput. 79(1): 542-563 (2019) - [j84]Ashok Jallepalli
, Robert M. Kirby:
Efficient Algorithms for the Line-SIAC Filter. J. Sci. Comput. 80(2): 743-761 (2019) - [j83]Xiaozhou Li
, Jennifer K. Ryan
, Robert M. Kirby, Kees Vuik
:
Smoothness-Increasing Accuracy-Conserving (SIAC) Filtering for Discontinuous Galerkin Solutions over Nonuniform Meshes: Superconvergence and Optimal Accuracy. J. Sci. Comput. 81(3): 1150-1180 (2019) - [j82]Daniel J. Perry, Robert M. Kirby, Akil Narayan
, Ross T. Whitaker:
Allocation Strategies for High Fidelity Models in the Multifidelity Regime. SIAM/ASA J. Uncertain. Quantification 7(1): 203-231 (2019) - [j81]Vahid Keshavarzzadeh, Robert M. Kirby, Akil Narayan
:
Convergence Acceleration for Time-Dependent Parametric Multifidelity Models. SIAM J. Numer. Anal. 57(3): 1344-1368 (2019) - [c54]Shandian Zhe, Wei W. Xing, Robert M. Kirby:
Scalable High-Order Gaussian Process Regression. AISTATS 2019: 2611-2620 - [c53]Majid Rasouli, Vidhi Zala
, Robert M. Kirby, Hari Sundar:
Scalable Lazy-update Multigrid Preconditioners. HPEC 2019: 1-7 - [c52]Jian Wang, Wei W. Xing
, Robert M. Kirby, Miaomiao Zhang:
Data-Driven Model Order Reduction for Diffeomorphic Image Registration. IPMI 2019: 694-705 - [i17]David Moxey, Chris D. Cantwell, Yan Bao, Andrea Cassinelli, Giacomo Castiglioni, Sehun Chun, Emilia Juda, Ehsan Kazemi, Kilian Lackhove, Julian Marcon
, Gianmarco Mengaldo, Douglas Serson, Michael Turner, Hui Xu, Joaquim Peiró, Robert M. Kirby, Spencer J. Sherwin:
Nektar++: enhancing the capability and application of high-fidelity spectral/hp element methods. CoRR abs/1906.03489 (2019) - [i16]Ashok Jallepalli, Joshua A. Levine, Robert M. Kirby:
The Effect of Data Transformations on Scalar Field Topological Analysis of High-Order FEM Solutions. CoRR abs/1907.07224 (2019) - [i15]Wei W. Xing
, Robert M. Kirby, Shandian Zhe:
Deep Coregionalization for the Emulation of Spatial-Temporal Fields. CoRR abs/1910.07577 (2019) - [i14]Max Carlson, Robert M. Kirby, Hari Sundar:
A Scalable Framework for Solving Fractional Diffusion Equations. CoRR abs/1911.11906 (2019) - [i13]Christoph Heinzl
, Robert Michael Kirby, Stepan V. Lomov, Guillermo Requena, Rüdiger Westermann:
Visual Computing in Materials Sciences (Dagstuhl Seminar 19151). Dagstuhl Reports 9(4): 1-42 (2019) - 2018
- [j80]Thomas Torsney-Weir
, Torsten Möller, Michael Sedlmair, Robert M. Kirby:
Hypersliceplorer: Interactive visualization of shapes in multiple dimensions. Comput. Graph. Forum 37(3): 229-240 (2018) - [j79]T. A. J. Ouermi, Robert M. Kirby, Martin Berzins:
Performance Optimization Strategies for WRF Physics Schemes Used in Weather Modeling. Int. J. Netw. Comput. 8(2): 301-327 (2018) - [j78]Anindya Bhaduri
, Yanyan He, Michael D. Shields
, Lori Graham-Brady
, Robert M. Kirby:
Stochastic collocation approach with adaptive mesh refinement for parametric uncertainty analysis. J. Comput. Phys. 371: 732-750 (2018) - [j77]Varun Shankar
, Akil Narayan
, Robert M. Kirby:
RBF-LOI: Augmenting Radial Basis Functions (RBFs) with Least Orthogonal Interpolation (LOI) for solving PDEs on surfaces. J. Comput. Phys. 373: 722-735 (2018) - [j76]Vidhi Zala
, Varun Shankar
, Shankar P. Sastry, Robert M. Kirby:
Curvilinear Mesh Adaptation Using Radial Basis Function Interpolation and Smoothing. J. Sci. Comput. 77(1): 397-418 (2018) - [j75]Vahid Keshavarzzadeh, Robert M. Kirby, Akil Narayan
:
Numerical Integration in Multiple Dimensions with Designed Quadrature. SIAM J. Sci. Comput. 40(4): A2033-A2061 (2018) - [j74]Varun Shankar
, Robert M. Kirby, Aaron L. Fogelson:
Robust Node Generation for Mesh-free Discretizations on Irregular Domains and Surfaces. SIAM J. Sci. Comput. 40(4): A2584-A2608 (2018) - [j73]Ashok Jallepalli, Julia Docampo-Sánchez
, Jennifer K. Ryan
, Robert Haimes, Robert M. Kirby:
On the Treatment of Field Quantities and Elemental Continuity in FEM Solutions. IEEE Trans. Vis. Comput. Graph. 24(1): 903-912 (2018) - [j72]Tim Dwyer, Niklas Elmqvist
, Brian D. Fisher, Steven Franconeri, Ingrid Hotz, Robert Michael Kirby, Shixia Liu, Tobias Schreck, Xiaoru Yuan:
Preface. IEEE Trans. Vis. Comput. Graph. 24(1): xi-xv (2018) - [j71]Marc Rautenhaus
, Michael Böttinger
, Stephan Siemen, Robert Hoffman, Robert M. Kirby
, Mahsa Mirzargar
, Niklas Röber, Rüdiger Westermann:
Visualization in Meteorology - A Survey of Techniques and Tools for Data Analysis Tasks. IEEE Trans. Vis. Comput. Graph. 24(12): 3268-3296 (2018) - [c51]Majid Rasouli, Vidhi Zala
, Robert M. Kirby, Hari Sundar:
Improving Performance and Scalability of Algebraic Multigrid through a Specialized MATVEC. HPEC 2018: 1-7 - [i12]Vidhi Zala, Varun Shankar, Shankar P. Sastry, Robert M. Kirby:
Curvilinear Mesh Adaptation using Radial Basis Function Interpolation and Smoothing. CoRR abs/1804.03358 (2018) - [i11]Vahid Keshavarzzadeh, Robert M. Kirby, Akil Narayan:
Numerical Integration in Multiple Dimensions with Designed Quadrature. CoRR abs/1804.06501 (2018) - [i10]Varun Shankar, Robert M. Kirby, Aaron L. Fogelson:
Robust Node Generation for Meshfree Discretizations on Irregular Domains and Surfaces. CoRR abs/1806.02972 (2018) - [i9]Varun Shankar, Akil Narayan, Robert M. Kirby:
RBF-LOI: Augmenting Radial Basis Functions (RBFs) with Least Orthogonal Interpolation (LOI) for Solving PDEs on Surfaces. CoRR abs/1807.02775 (2018) - [i8]Vahid Keshavarzzadeh, Robert M. Kirby, Akil Narayan:
Parametric Topology Optimization with Multi-Resolution Finite Element Models. CoRR abs/1808.10367 (2018) - [i7]Daniel J. Perry, Robert M. Kirby, Akil Narayan, Ross T. Whitaker:
Allocation strategies for high fidelity models in the multifidelity regime. CoRR abs/1812.11601 (2018) - 2017
- [b3]Tobias Preusser, Robert M. Kirby, Torben Pätz:
Stochastic Partial Differential Equations for Computer Vision with Uncertain Data. Synthesis Lectures on Visual Computing, Morgan & Claypool Publishers 2017, ISBN 978-3-031-01466-6 - [j70]Mahsa Mirzargar
, Ashok Jallepalli
, Jennifer K. Ryan
, Robert M. Kirby:
Hexagonal Smoothness-Increasing Accuracy-Conserving Filtering. J. Sci. Comput. 73(2-3): 1072-1093 (2017) - [j69]Julia Docampo-Sánchez
, Jennifer K. Ryan, Mahsa Mirzargar, Robert M. Kirby:
Multi-Dimensional Filtering: Reducing the Dimension Through Rotation. SIAM J. Sci. Comput. 39(5) (2017) - [j68]Gennady L. Andrienko
, Shixia Liu, John T. Stasko, Niklas Elmqvist
, Bongshin Lee, Kwan-Liu Ma, James P. Ahrens
, Robert M. Kirby, Jos B. T. M. Roerdink:
Preface. IEEE Trans. Vis. Comput. Graph. 23(1): xi-xv (2017) - [c50]T. A. J. Ouermi, Aaron Knoll, Robert M. Kirby, Martin Berzins:
Optimization Strategies for WRF Single-Moment 6-Class Microphysics Scheme (WSM6) on Intel Microarchitectures. CANDAR 2017: 146-152 - [c49]T. A. J. Ouermi, Aaron Knoll, Robert M. Kirby, Martin Berzins:
OpenMP 4 Fortran Modernization of WSM6 for KNL. PEARC 2017: 12:1-12:8 - [i6]Mahsa Mirzargar, Ross T. Whitaker, Robert M. Kirby:
Exploration of Heterogeneous Data Using Robust Similarity. CoRR abs/1710.02862 (2017) - 2016
- [j67]Mukund Raj, Mahsa Mirzargar, J. Samuel Preston, Robert M. Kirby, Ross T. Whitaker:
Evaluating Shape Alignment via Ensemble Visualization. IEEE Computer Graphics and Applications 36(3): 60-71 (2016) - [j66]Xiaozhou Li
, Jennifer K. Ryan
, Robert Michael Kirby, Cornelis Vuik
:
Smoothness-Increasing Accuracy-Conserving (SIAC) filters for derivative approximations of discontinuous Galerkin (DG) solutions over nonuniform meshes and near boundaries. J. Comput. Appl. Math. 294: 275-296 (2016) - [j65]Sergey Yakovlev, David Moxey
, Robert M. Kirby, Spencer J. Sherwin
:
To CG or to HDG: A Comparative Study in 3D. J. Sci. Comput. 67(1): 192-220 (2016) - [j64]Mahsa Mirzargar, Jennifer K. Ryan
, Robert M. Kirby:
Smoothness-Increasing Accuracy-Conserving (SIAC) Filtering and Quasi-Interpolation: A Unified View. J. Sci. Comput. 67(1): 237-261 (2016) - [c48]James King, Thomas Gilray, Robert M. Kirby, Matthew Might:
Dynamic Sparse-Matrix Allocation on GPUs. ISC 2016: 61-80 - 2015
- [b2]Tiago Etiene, Robert M. Kirby, Cláudio T. Silva:
An Introduction to Verification of Visualization Techniques. Synthesis Lectures on Visual Computing, Morgan & Claypool Publishers 2015, ISBN 978-3-031-01459-8 - [j63]Le Liu, Mahsa Mirzargar, Robert M. Kirby, Ross T. Whitaker, Donald H. House:
Visualizing Time-Specific Hurricane Predictions, with Uncertainty, from Storm Path Ensembles. Comput. Graph. Forum 34(3): 371-380 (2015) - [j62]Zhisong Fu, Sergey Yakovlev, Robert Michael Kirby, Ross T. Whitaker:
Fast parallel solver for the levelset equations on unstructured meshes. Concurr. Comput. Pract. Exp. 27(7): 1639-1657 (2015) - [j61]Chris D. Cantwell
, David Moxey
, A. Comerford, A. Bolis, G. Rocco, Gianmarco Mengaldo
, Daniele De Grazia, Sergey Yakovlev, J.-E. Lombard, D. Ekelschot, B. Jordi, Hui Xu
, Yumnah Mohamied, Claes Eskilsson
, B. Nelson, Peter E. J. Vos, C. Biotto, Robert Michael Kirby, Spencer J. Sherwin
:
Nektar++: An open-source spectral/hp element framework. Comput. Phys. Commun. 192: 205-219 (2015) - [j60]Yanyan He, Mahsa Mirzargar, Robert M. Kirby:
Mixed aleatory and epistemic uncertainty quantification using fuzzy set theory. Int. J. Approx. Reason. 66: 1-15 (2015) - [j59]Varun Shankar
, Grady B. Wright, Robert M. Kirby, Aaron L. Fogelson:
A Radial Basis Function (RBF)-Finite Difference (FD) Method for Diffusion and Reaction-Diffusion Equations on Surfaces. J. Sci. Comput. 63(3): 745-768 (2015) - [j58]Jennifer K. Ryan
, Xiaozhou Li
, Robert M. Kirby, Kees Vuik
:
One-Sided Position-Dependent Smoothness-Increasing Accuracy-Conserving (SIAC) Filtering Over Uniform and Non-uniform Meshes. J. Sci. Comput. 64(3): 773-817 (2015) - [c47]T. James Lewis, Shankar P. Sastry, Robert Michael Kirby, Ross T. Whitaker:
A GPU-Based MIS Aggregation Strategy: Algorithms, Comparisons, and Applications within AMG. HiPC 2015: 214-223 - [c46]Mahsa Mirzargar, Yanyan He, Robert Michael Kirby:
Application of Uncertainty Modeling Frameworks to Uncertain Isosurface Extraction. IUKM 2015: 336-349 - 2014
- [j57]Harsh Bhatia, Valerio Pascucci
, Robert M. Kirby, Peer-Timo Bremer:
Extracting Features from Time-Dependent Vector Fields Using Internal Reference Frames. Comput. Graph. Forum 33(3): 21-30 (2014) - [j56]Zhisong Fu, T. James Lewis, Robert M. Kirby, Ross T. Whitaker:
Architecting the finite element method pipeline for the GPU. J. Comput. Appl. Math. 257: 195-211 (2014) - [j55]Chris D. Cantwell
, Sergey Yakovlev, Robert M. Kirby, Nicholas S. Peters, Spencer J. Sherwin
:
High-order spectral/hp element discretisation for reaction-diffusion problems on surfaces: Application to cardiac electrophysiology. J. Comput. Phys. 257: 813-829 (2014) - [j54]Hanieh Mirzaee, Jennifer K. Ryan
, Robert M. Kirby:
Smoothness-Increasing Accuracy-Conserving (SIAC) Filters for Discontinuous Galerkin Solutions: Application to Structured Tetrahedral Meshes. J. Sci. Comput. 58(3): 690-704 (2014) - [j53]James King, Sergey Yakovlev, Zhisong Fu, Robert M. Kirby, Spencer J. Sherwin
:
Exploiting Batch Processing on Streaming Architectures to Solve 2D Elliptic Finite Element Problems: A Hybridized Discontinuous Galerkin (HDG) Case Study. J. Sci. Comput. 60(2): 457-482 (2014) - [j52]Blake Nelson, Robert M. Kirby, Steven G. Parker:
Algorithm 940: Optimal Accumulator-Based Expression Evaluation through the Use of Expression Templates. ACM Trans. Math. Softw. 40(3): 21:1-21:21 (2014) - [j51]Blake Nelson, Robert M. Kirby, Robert Haimes:
GPU-Based Volume Visualization from High-Order Finite Element Fields. IEEE Trans. Vis. Comput. Graph. 20(1): 70-83 (2014) - [j50]Tiago Etiene, Daniel Jönsson
, Timo Ropinski
, Carlos Eduardo Scheidegger, João Luiz Dihl Comba
, Luis Gustavo Nonato, Robert M. Kirby, Anders Ynnerman, Cláudio T. Silva:
Verifying Volume Rendering Using Discretization Error Analysis. IEEE Trans. Vis. Comput. Graph. 20(1): 140-154 (2014) - [j49]Mahsa Mirzargar, Ross T. Whitaker, Robert M. Kirby:
Curve Boxplot: Generalization of Boxplot for Ensembles of Curves. IEEE Trans. Vis. Comput. Graph. 20(12): 2654-2663 (2014) - [c45]Jessie France, Yaniv Gur, Robert M. Kirby, Chris R. Johnson:
A Bayesian Approach to Quantifying Uncertainty in Tikhonov Solutions for the Inverse Problem of Electrocardiography. CinC 2014: 529-532 - [i5]Varun Shankar, Grady B. Wright, Robert M. Kirby, Aaron L. Fogelson:
A Radial Basis Function (RBF)-Finite Difference (FD) Method for Diffusion and Reaction-Diffusion Equations on Surfaces. CoRR abs/1404.0812 (2014) - 2013
- [j48]Robert M. Kirby, Miriah D. Meyer:
Visualization Collaborations: What Works and Why. IEEE Computer Graphics and Applications 33(6): 82-88 (2013) - [j47]Torben Pätz, Robert M. Kirby, Tobias Preusser:
Ambrosio-Tortorelli Segmentation of Stochastic Images: Model Extensions, Theoretical Investigations and Numerical Methods. Int. J. Comput. Vis. 103(2): 190-212 (2013) - [j46]Dafang Wang, Robert M. Kirby, Robert S. MacLeod, Chris R. Johnson:
Inverse electrocardiographic source localization of ischemia: An optimization framework and finite element solution. J. Comput. Phys. 250: 403-424 (2013) - [j45]Hanieh Mirzaee, James King, Jennifer K. Ryan
, Robert M. Kirby:
Smoothness-Increasing Accuracy-Conserving Filters for Discontinuous Galerkin Solutions over Unstructured Triangular Meshes. SIAM J. Sci. Comput. 35(1) (2013) - [j44]Zhisong Fu, Robert M. Kirby, Ross T. Whitaker:
A Fast Iterative Method for Solving the Eikonal Equation on Tetrahedral Domains. SIAM J. Sci. Comput. 35(5) (2013) - [j43]Ross T. Whitaker, Mahsa Mirzargar, Robert M. Kirby:
Contour Boxplots: A Method for Characterizing Uncertainty in Feature Sets from Simulation Ensembles. IEEE Trans. Vis. Comput. Graph. 19(12): 2713-2722 (2013) - [c44]Tiago Etiene, Robert M. Kirby, Cláudio T. Silva:
A Study Of Discretization Errors In Volume Rendering Integral Approximations. EuroRV³@EuroVis 2013 - [c43]Shankar P. Sastry, Robert M. Kirby:
On Interpolation Errors over Quadratic Nodal Triangular Finite Elements. IMR 2013: 349-366 - [c42]James King, Robert M. Kirby:
A scalable, efficient scheme for evaluation of stencil computations over unstructured meshes. SC 2013: 79:1-79:12 - [e1]Paul Rosenthal, Robert S. Laramee, Mike Kirby, Gordon L. Kindlmann:
2nd EuroVis Workshop on Reproducibility, Verification, and Validation in Visualization, EuroRV³@EuroVis 2013, Leipzig, Germany, June 17-18, 2013. Eurographics Association 2013, ISBN 978-3-905674-56-9 [contents] - [i4]Varun Shankar, Grady B. Wright, Robert M. Kirby, Aaron L. Fogelson:
Augmenting the Immersed Boundary Method with Radial Basis Functions (RBFs) for the Modeling of Platelets in Hemodynamic Flows. CoRR abs/1304.7479 (2013) - [i3]Mary W. Hall, Robert M. Kirby, Feifei Li, Miriah D. Meyer, Valerio Pascucci, Jeff M. Phillips, Robert Ricci, Jacobus E. van der Merwe, Suresh Venkatasubramanian:
Rethinking Abstractions for Big Data: Why, Where, How, and What. CoRR abs/1306.3295 (2013) - [i2]Varun Shankar, Grady B. Wright, Aaron L. Fogelson, Robert M. Kirby:
A Radial Basis Function (RBF)-Finite Difference Method for the Simulation of Reaction-Diffusion Equations on Stationary Platelets within the Augmented Forcing Method. CoRR abs/1310.5207 (2013) - 2012
- [j42]Tobias Martin, Elaine Cohen, Robert M. Kirby:
Mixed-element volume completion from NURBS surfaces. Comput. Graph. 36(5): 548-554 (2012) - [j41]Robert M. Kirby, Spencer J. Sherwin
, Bernardo Cockburn
:
To CG or to HDG: A Comparative Study. J. Sci. Comput. 51(1): 183-212 (2012) - [j40]Hanieh Mirzaee, Jennifer K. Ryan
, Robert M. Kirby:
Efficient Implementation of Smoothness-Increasing Accuracy-Conserving (SIAC) Filters for Discontinuous Galerkin Solutions. J. Sci. Comput. 52(1): 85-112 (2012) - [j39]James King, Hanieh Mirzaee, Jennifer K. Ryan
, Robert M. Kirby:
Smoothness-Increasing Accuracy-Conserving (SIAC) Filtering for Discontinuous Galerkin Solutions: Improved Errors Versus Higher-Order Accuracy. J. Sci. Comput. 53(1): 129-149 (2012) - [j38]Hanne Tiesler, Robert M. Kirby, Dongbin Xiu, Tobias Preusser:
Stochastic Collocation for Optimal Control Problems with Stochastic PDE Constraints. SIAM J. Control. Optim. 50(5): 2659-2682 (2012) - [j37]Tobias Martin, Elaine Cohen, Mike Kirby:
Direct Isosurface Visualization of Hex-Based High-Order Geometry and Attribute Representations. IEEE Trans. Vis. Comput. Graph. 18(5): 753-766 (2012) - [j36]Tiago Etiene, Luis Gustavo Nonato, Carlos Eduardo Scheidegger, Julien Tierny, Thomas J. Peters, Valerio Pascucci
, Robert M. Kirby, Cláudio T. Silva:
Topology Verification for Isosurface Extraction. IEEE Trans. Vis. Comput. Graph. 18(6): 952-965 (2012) - [j35]Blake Nelson, Eric Liu, Robert M. Kirby, Robert Haimes:
ElVis: A System for the Accurate and Interactive Visualization of High-Order Finite Element Solutions. IEEE Trans. Vis. Comput. Graph. 18(12): 2325-2334 (2012) - [c41]Markus Üffinger, Filip Sadlo, Mike Kirby, Charles D. Hansen, Thomas Ertl:
FTLE Computation Beyond First-Order Approximation. Eurographics (Short Papers) 2012: 61-64 - [i1]Varun Shankar, Grady B. Wright, Aaron L. Fogelson, Robert M. Kirby:
A Study of Different Modeling Choices For Simulating Platelets Within the Immersed Boundary Method. CoRR abs/1210.1885 (2012) - 2011
- [j34]Ganesh Gopalakrishnan, Robert M. Kirby, Stephen F. Siegel, Rajeev Thakur
, William Gropp
, Ewing L. Lusk, Bronis R. de Supinski, Martin Schulz
, Greg Bronevetsky:
Formal analysis of MPI-based parallel programs. Commun. ACM 54(12): 82-91 (2011) - [j33]Samuel A. Isaacson
, Robert M. Kirby:
Numerical solution of linear Volterra integral equations of the second kind with sharp gradients. J. Comput. Appl. Math. 235(14): 4283-4301 (2011) - [j32]Sarah E. Geneser, Jacob D. Hinkle
, Robert M. Kirby, Brian Wang, Bill Salter, Sarang C. Joshi:
Quantifying variability in radiation dose due to respiratory-induced tumor motion. Medical Image Anal. 15(4): 640-649 (2011) - [j31]Guodong Li, Robert Palmer, Michael Delisi, Ganesh Gopalakrishnan, Robert M. Kirby:
Formal specification of MPI 2.0: Case study in specifying a practical concurrent programming API. Sci. Comput. Program. 76(2): 65-81 (2011) - [j30]Hanieh Mirzaee, Liangyue Ji, Jennifer K. Ryan
, Robert M. Kirby:
Smoothness-Increasing Accuracy-Conserving (SIAC) Postprocessing for Discontinuous Galerkin Solutions over Structured Triangular Meshes. SIAM J. Numer. Anal. 49(5): 1899-1920 (2011) - [j29]Zhisong Fu, Won-Ki Jeong, Yongsheng Pan, Robert M. Kirby, Ross T. Whitaker:
A Fast Iterative Method for Solving the Eikonal Equation on Triangulated Surfaces. SIAM J. Sci. Comput. 33(5): 2468-2488 (2011) - [j28]Dafang Wang, Robert M. Kirby, Chris R. Johnson:
Finite-Element-Based Discretization and Regularization Strategies for 3-D Inverse Electrocardiography. IEEE Trans. Biomed. Eng. 58(6): 1827-1838 (2011) - [j27]Blake Nelson, Robert M. Kirby, Robert Haimes:
GPU-Based Interactive Cut-Surface Extraction From High-Order Finite Element Fields. IEEE Trans. Vis. Comput. Graph. 17(12): 1803-1811 (2011) - [c40]Anh Vo, Ganesh Gopalakrishnan, Robert M. Kirby, Bronis R. de Supinski, Martin Schulz
, Greg Bronevetsky:
Large Scale Verification of MPI Programs Using Lamport Clocks with Lazy Update. PACT 2011: 330-339 - [c39]Dafang Wang, Robert M. Kirby, Rob S. MacLeod, Chris R. Johnson:
An optimization framework for inversely estimating myocardial transmembrane potentials and localizing ischemia. EMBC 2011: 1680-1683 - 2010
- [j26]Peter E. J. Vos, Spencer J. Sherwin
, Robert M. Kirby:
From h to p efficiently: Implementing finite and spectral/hp element methods to achieve optimal performance for low- and high-order discretisations. J. Comput. Phys. 229(13): 5161-5181 (2010) - [j25]Hanieh Mirzaee, Jennifer K. Ryan
, Robert M. Kirby:
Quantification of Errors Introduced in the Numerical Approximation and Implementation of Smoothness-Increasing Accuracy Conserving (SIAC) Filtering of Discontinuous Galerkin (DG) Fields. J. Sci. Comput. 45(1-3): 447-470 (2010) - [j24]Salman Pervez, Ganesh Gopalakrishnan, Robert M. Kirby, Rajeev Thakur
, William Gropp
:
Formal methods applied to high-performance computing software design: a case study of MPI one-sided communication-based locking. Softw. Pract. Exp. 40(1): 23-43 (2010) - [j23]Yu Yang, Xiaofang Chen, Ganesh Gopalakrishnan, Robert M. Kirby:
Distributed dynamic partial order reduction. Int. J. Softw. Tools Technol. Transf. 12(2): 113-122 (2010) - [j22]Dafang Wang, Robert M. Kirby, Chris R. Johnson:
Resolution Strategies for the Finite-Element-Based Solution of the ECG Inverse Problem. IEEE Trans. Biomed. Eng. 57(2): 220-237 (2010) - [c38]Guodong Li, Ganesh Gopalakrishnan, Robert M. Kirby, Daniel J. Quinlan:
A symbolic verifier for CUDA programs. PPoPP 2010: 357-358 - [c37]Sarvani S. Vakkalanka, Anh Vo, Ganesh Gopalakrishnan, Robert M. Kirby:
Precise Dynamic Analysis for Slack Elasticity: Adding Buffering without Adding Bugs. EuroMPI 2010: 152-159 - [c36]Ganesh Gopalakrishnan, Robert M. Kirby:
Top ten ways to make formal methods for HPC practical. FoSER 2010: 137-142
2000 – 2009
- 2009
- [j21]Tobias Martin, Elaine Cohen, Robert Michael Kirby:
Volumetric parameterization and trivariate B-spline fitting using harmonic functions. Comput. Aided Geom. Des. 26(6): 648-664 (2009) - [j20]David Walfisch, Jennifer K. Ryan
, Robert M. Kirby, Robert Haimes:
One-Sided Smoothness-Increasing Accuracy-Conserving Filtering for Enhanced Streamline Integration through Discontinuous Fields. J. Sci. Comput. 38(2): 164-184 (2009) - [j19]Igor Melatti, Robert Palmer, Geoffrey Sawaya, Yu Yang, Robert M. Kirby, Ganesh Gopalakrishnan:
Parallel and distributed model checking in Eddy. Int. J. Softw. Tools Technol. Transf. 11(1): 13-25 (2009) - [j18]J. Samuel Preston, Tolga Tasdizen, Christi M. Terry, Alfred K. Cheung, Robert M. Kirby:
Using the Stochastic Collocation Method for the Uncertainty Quantification of Drug Concentration Due to Depot Shape Variability. IEEE Trans. Biomed. Eng. 56(3): 609-620 (2009) - [j17]Tiago Etiene, Carlos Eduardo Scheidegger, Luis Gustavo Nonato, Robert M. Kirby, Cláudio T. Silva:
Verifiable Visualization for Isosurface Extraction. IEEE Trans. Vis. Comput. Graph. 15(6): 1227-1234 (2009) - [c35]Sarvani S. Vakkalanka, Anh Vo, Ganesh Gopalakrishnan, Robert M. Kirby:
Reduced Execution Semantics of MPI: From Theory to Practice. FM 2009: 724-740 - [c34]Sarah E. Geneser, Robert M. Kirby, Brian Wang, Bill Salter, Sarang C. Joshi:
Incorporating Patient Breathing Variability into a Stochastic Model of Dose Deposition for Stereotactic Body Radiation Therapy. IPMI 2009: 688-700 - [c33]Anh Vo, Sarvani S. Vakkalanka, Michael Delisi, Ganesh Gopalakrishnan, Robert M. Kirby, Rajeev Thakur
:
Formal verification of practical MPI programs. PPoPP 2009: 261-270 - [c32]Ganesh Gopalakrishnan, Robert M. Kirby:
Practical Formal Verification of MPI and Thread Programs. PVM/MPI 2009: 8 - [c31]Sriram Aananthakrishnan, Michael Delisi, Sarvani S. Vakkalanka, Anh Vo, Ganesh Gopalakrishnan, Robert M. Kirby, Rajeev Thakur:
How Formal Dynamic Verification Tools Facilitate Novel Concurrency Visualizations. PVM/MPI 2009: 261-270 - [c30]Anh Vo, Sarvani S. Vakkalanka, Jason Williams, Ganesh Gopalakrishnan, Robert M. Kirby, Rajeev Thakur:
Sound and Efficient Dynamic Verification of MPI Programs with Probe Non-determinism. PVM/MPI 2009: 271-281 - [c29]Sarvani S. Vakkalanka, Grzegorz Szubzda, Anh Vo, Ganesh Gopalakrishnan, Robert M. Kirby, Rajeev Thakur:
Static-Analysis Assisted Dynamic Verification of MPI Waitany Programs (Poster Abstract). PVM/MPI 2009: 329-330 - 2008
- [j16]Robert M. Kirby, Cláudio T. Silva:
The Need for Verifiable Visualization. IEEE Computer Graphics and Applications 28(5): 78-83 (2008) - [j15]Tobias Preusser, Hanno Scharr
, Kai Krajsek
, Robert M. Kirby:
Building Blocks for Computer Vision with Stochastic Partial Differential Equations. Int. J. Comput. Vis. 80(3): 375-405 (2008) - [j14]Jan S. Hesthaven, Robert M. Kirby:
Filtering in Legendre spectral methods. Math. Comput. 77(263): 1425-1452 (2008) - [j13]Sarah E. Geneser, Robert M. Kirby, Robert S. MacLeod:
Application of Stochastic Finite Element Methods to Study the Sensitivity of ECG Forward Modeling to Organ Conductivity. IEEE Trans. Biomed. Eng. 55(1): 31-40 (2008) - [j12]Michael Steffen, Sean Curtis, Robert M. Kirby, Jennifer K. Ryan
:
Investigation of Smoothness-Increasing Accuracy-Conserving Filters for Improving Streamline Integration through Discontinuous Fields. IEEE Trans. Vis. Comput. Graph. 14(3): 680-692 (2008) - [j11]Miriah D. Meyer, Ross T. Whitaker, Robert M. Kirby, Christian Ledergerber, Hanspeter Pfister
:
Particle-based Sampling and Meshing of Surfaces in Multimaterial Volumes. IEEE Trans. Vis. Comput. Graph. 14(6): 1539-1546 (2008) - [c28]Sarvani S. Vakkalanka, Ganesh Gopalakrishnan, Robert M. Kirby:
Dynamic Verification of MPI Programs with Reductions in Presence of Split Operations and Relaxed Orderings. CAV 2008: 66-79 - [c27]Ganesh Gopalakrishnan, Robert M. Kirby:
Runtime verification methods for MPI. IPDPS 2008: 1-5 - [c26]Sarvani S. Vakkalanka, Michael Delisi, Ganesh Gopalakrishnan, Robert M. Kirby:
Scheduling considerations for building dynamic verification tools for MPI. PADTAD 2008: 3 - [c25]Guodong Li, Michael Delisi, Ganesh Gopalakrishnan, Robert M. Kirby:
Formal specification of the MPI-2.0 standard in TLA+. PPoPP 2008: 283-284 - [c24]Sarvani S. Vakkalanka, Subodh Sharma, Ganesh Gopalakrishnan, Robert M. Kirby:
ISP: a tool for model checking MPI programs. PPoPP 2008: 285-286 - [c23]Sarvani S. Vakkalanka, Michael Delisi, Ganesh Gopalakrishnan, Robert M. Kirby, Rajeev Thakur
, William Gropp
:
Implementing Efficient Dynamic Formal Verification Methods for MPI Programs. PVM/MPI 2008: 248-256 - [c22]Subodh Sharma
, Sarvani S. Vakkalanka, Ganesh Gopalakrishnan, Robert M. Kirby, Rajeev Thakur
, William Gropp
:
A Formal Approach to Detect Functionally Irrelevant Barriers in MPI Programs. PVM/MPI 2008: 265-273 - [c21]Tim Kröger, Inga Altrogge, Olaf Konrad, Robert M. Kirby, Tobias Preusser:
Estimation of Probability Density Functions for Parameter Sensitivity Analyses. SimVis 2008: 61-74 - [c20]Tobias Martin, Elaine Cohen, Mike Kirby:
Volumetric parameterization and trivariate b-spline fitting using harmonic functions. Symposium on Solid and Physical Modeling 2008: 269-280 - [c19]Yu Yang, Xiaofang Chen, Ganesh Gopalakrishnan, Robert M. Kirby:
Efficient Stateful Dynamic Partial Order Reduction. SPIN 2008: 288-305 - 2007
- [j10]C. W. Hamman, Robert M. Kirby, Martin Berzins:
Parallelization and scalability of a spectral element channel flow solver for incompressible Navier-Stokes equations. Concurr. Comput. Pract. Exp. 19(10): 1403-1422 (2007) - [j9]Elijah P. Newren, Aaron L. Fogelson, Robert D. Guy, Robert M. Kirby:
Unconditionally stable discretizations of the immersed boundary equations. J. Comput. Phys. 222(2): 702-719 (2007) - [j8]Robert M. Kirby, Zohar Yosibash
, George E. Karniadakis:
Towards stable coupling methods for high-order discretization of fluid-structure interaction: Algorithms and observations. J. Comput. Phys. 223(2): 489-518 (2007) - [j7]Sean Curtis, Robert M. Kirby, Jennifer K. Ryan
, Chi-Wang Shu
:
Postprocessing for the Discontinuous Galerkin Method over Nonuniform Meshes. SIAM J. Sci. Comput. 30(1): 272-289 (2007) - [j6]Miriah D. Meyer, Blake Nelson, Robert M. Kirby, Ross T. Whitaker:
Particle Systems for Efficient and Accurate High-Order Finite Element Visualization. IEEE Trans. Vis. Comput. Graph. 13(5): 1015-1026 (2007) - [j5]Miriah D. Meyer, Robert M. Kirby, Ross T. Whitaker:
Topology, Accuracy, and Quality of Isosurface Meshes Using Dynamic Particles. IEEE Trans. Vis. Comput. Graph. 13(6): 1704-1711 (2007) - [c18]Robert Palmer, Michael Delisi, Ganesh Gopalakrishnan, Robert M. Kirby:
An Approach to Formalization and Analysis of Message Passing Libraries. FMICS 2007: 164-181 - [c17]Ganesh Gopalakrishnan, Robert M. Kirby:
Formal Analysis for Debugging and Performance Optimization of MPI. IPDPS 2007: 1-6 - [c16]Robert Palmer, Ganesh Gopalakrishnan, Robert M. Kirby:
Semantics driven dynamic partial-order reduction of MPI-based parallel programs. PADTAD 2007: 43-53 - [c15]Salman Pervez, Ganesh Gopalakrishnan, Robert M. Kirby, Robert Palmer, Rajeev Thakur
, William Gropp
:
Practical Model-Checking Method for Verifying Correctness of MPI Programs. PVM/MPI 2007: 344-353 - [c14]Yu Yang, Xiaofang Chen, Ganesh Gopalakrishnan, Robert M. Kirby:
Distributed Dynamic Partial Order Reduction Based Verification of Threaded Software. SPIN 2007: 58-75 - [c13]Ganesh Gopalakrishnan, Robert M. Kirby:
Formal Methods for MPI Programs. Festschrift honoring Gary Lindstrom 2007: 19-27 - 2006
- [j4]Allen R. Sanderson, Robert M. Kirby, Chris R. Johnson, Lingfa Yang:
Advanced Reaction-Diffusion Models for Texture Synthesis. J. Graph. Tools 11(3): 47-71 (2006) - [j3]Blake Nelson, Robert M. Kirby:
Ray-Tracing Polymorphic Multidomain Spectral/hp Elements for Isosurface Rendering. IEEE Trans. Vis. Comput. Graph. 12(1): 114-125 (2006) - [c12]Robert M. Kirby, Cullen R. Johnson, Martin Berzins:
Involving Undergraduates in Computational Science and Engineering Research: Successes and Challenges. International Conference on Computational Science (2) 2006: 147-154 - [c11]Ganesh Gopalakrishnan, Robert M. Kirby:
Toward reliable and efficient message passing software through formal analysis. IPDPS 2006 - [c10]Salman Pervez, Ganesh Gopalakrishnan, Robert M. Kirby, Rajeev Thakur
, William D. Gropp
:
Formal Verification of Programs That Use MPI One-Sided Communication. PVM/MPI 2006: 30-39 - [c9]Igor Melatti, Robert Palmer, Geoffrey Sawaya, Yu Yang, Robert M. Kirby, Ganesh Gopalakrishnan:
Parallel and Distributed Model Checking in Eddy. SPIN 2006: 108-125 - 2005
- [j2]Robert M. Kirby, George E. Karniadakis:
Selecting the Numerical Flux in Discontinuous Galerkin Methods for Diffusion Problems. J. Sci. Comput. 22(1): 385-411 (2005) - [j1]David H. Laidlaw, Robert M. Kirby, Cullen D. Jackson, J. Scott Davidson, Timothy S. Miller, Marco da Silva, William H. Warren, Michael J. Tarr:
Comparing 2D Vector Field Visualization Methods: A User Study. IEEE Trans. Vis. Comput. Graph. 11(1): 59-70 (2005) - [c8]Martin Berzins, Robert M. Kirby, Cullen R. Johnson:
Integrating Teaching and Research in HPC: Experiences and Opportunities. International Conference on Computational Science (2) 2005: 36-43 - [c7]David E. Breen, Mike Kirby, Aaron E. Lefohn, Ken Museth, Tobias Preusser, Guillermo Sapiro, Ross T. Whitaker:
Level Set and PDE Methods for Visualization. IEEE Visualization 2005: 125 - [c6]Robert Palmer, Steve Barrus, Yu Yang, Ganesh Gopalakrishnan, Robert M. Kirby:
Gauss: A Framework for Verifying Scientific Computing Software. SoftMC@CAV 2005: 95-106 - [p1]Robert M. Kirby, Daniel F. Keefe, David H. Laidlaw:
Painting and Visualization. The Visualization Handbook 2005: 873-891 - 2004
- [c5]Allen R. Sanderson, Chris R. Johnson, Robert M. Kirby:
Display of Vector Fields Using a Reaction-Diffusion Model. IEEE Visualization 2004: 115-122 - 2003
- [b1]George E. Karniadakis, Robert M. Kirby:
Parallel Scientific Computing in C++ and MPI - A Seamless Approach to Parallel Algorithms and their Implementation. Cambridge University Press 2003, ISBN 978-0-521-52080-5, pp. I-XI, 1-616 - 2001
- [c4]David H. Laidlaw, Robert M. Kirby, J. Scott Davidson, Timothy S. Miller, Marco da Silva, William H. Warren, Michael J. Tarr:
Quantitative Comparative Evaluation of 2D Vector Field Visualization Methods. IEEE Visualization 2001: 143-150 - 2000
- [c3]Andrew S. Forsberg, David H. Laidlaw, Andries van Dam, Robert M. Kirby, George E. Karniadakis, Jonathan L. Elion:
Immersive virtual reality for visualizing flow through an artery. IEEE Visualization 2000: 457-460
1990 – 1999
- 1999
- [c2]George-Sosei Karamanos, Constantinos Evangelinos, Richard C. Boes, Robert M. Kirby, George E. Karniadakis:
Direct Numerical Simulation of Turbulence with a PC/Linux Cluster: Fact or Fiction? SC 1999: 53 - [c1]Robert M. Kirby, H. Marmanis, David H. Laidlaw:
Visualizing Multivalued Data from 2D Incompressible Flows Using Concepts from Painting. IEEE Visualization 1999: 333-340
Coauthor Index
aka: George E. Karniadakis
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