default search action
Google
Google Scholar
Semantic Scholar
Internet Archive Scholar
CiteSeerX
ORCIDArtem Cherkasov
Person information
Refine list
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
2020 – today
- 2024
[j41]Hazem Mslati
, Francesco Gentile, Mohit Pandey, Fuqiang Ban, Artem Cherkasov:
PROTACable Is an Integrative Computational Pipeline of 3-D Modeling and Deep Learning To Automate the De Novo Design of PROTACs. J. Chem. Inf. Model. 64(8): 3034-3046 (2024)- 2023
- [j40]Olivia Garland, Mariia Radaeva, Mohit Pandey, Artem Cherkasov, Nada Lallous:
PurificationDB: database of purification conditions for proteins. Database J. Biol. Databases Curation 2023 (2023) - [j39]Olivia Garland, Anh-Tien Ton, Shoeib Moradi, Jason R. Smith, Suzana Kovacic, Kurtis Ng, Mohit Pandey, Fuqiang Ban, Jaeyong Lee, Marija Vuckovic, Liam J. Worrall, Robert N. Young, Ralph Pantophlet, Natalie C. J. Strynadka, Artem Cherkasov:
Large-Scale Virtual Screening for the Discovery of SARS-CoV-2 Papain-like Protease (PLpro) Non-covalent Inhibitors. J. Chem. Inf. Model. 63(7): 2158-2169 (2023) - [i3]Tony Shen, Mohit Pandey, Jason R. Smith, Artem Cherkasov, Martin Ester:
TacoGFN: Target Conditioned GFlowNet for Structure-Based Drug Design. CoRR abs/2310.03223 (2023) - 2022
- [j38]Jean Charle Yaacoub, James Gleave, Francesco Gentile, Abraham C. Stern, Artem Cherkasov:
DD-GUI: a graphical user interface for deep learning-accelerated virtual screening of large chemical libraries (Deep Docking). Bioinform. 38(4): 1146-1148 (2022) - [j37]Mohit Pandey, Michael Fernández, Francesco Gentile, Olexandr Isayev, Alexander Tropsha, Abraham C. Stern, Artem Cherkasov:
The transformational role of GPU computing and deep learning in drug discovery. Nat. Mach. Intell. 4(3): 211-221 (2022) - 2021
- [j36]Hazem Mslati, Francesco Gentile, Carl Perez, Artem Cherkasov:
Comprehensive Consensus Analysis of SARS-CoV-2 Drug Repurposing Campaigns. J. Chem. Inf. Model. 61(8): 3771-3788 (2021) - [j35]Daniel Robert Korn, Vera Pervitsky, Tesia M. Bobrowski, Vinicius M. Alves, Charles Schmitt, Chris Bizon, Nancy Baker, Rada Chirkova, Artem Cherkasov, Eugene N. Muratov, Alexander Tropsha:
COVID-19 Knowledge Extractor (COKE): A Curated Repository of Drug-Target Associations Extracted from the CORD-19 Corpus of Scientific Publications on COVID-19. J. Chem. Inf. Model. 61(12): 5734-5741 (2021) - 2020
- [j34]Godwin Woo, Michael Fernández, Michael Hsing, Nathan A. Lack, Ayse Derya Cavga, Artem Cherkasov:
DeepCOP: deep learning-based approach to predict gene regulating effects of small molecules. Bioinform. 36(3): 813-818 (2020) - [j33]Mariia Radaeva, Xuesen Dong, Artem Cherkasov:
The Use of Methods of Computer-Aided Drug Discovery in the Development of Topoisomerase II Inhibitors: Applications and Future Directions. J. Chem. Inf. Model. 60(8): 3703-3721 (2020)
2010 – 2019
- 2019
- [j32]Michael Fernández, Fuqiang Ban, Godwin Woo, Olexandr Isayev, Carl Perez, Valery Fokin, Alexander Tropsha, Artem Cherkasov:
Quantitative Structure-Price Relationship (QS$R) Modeling and the Development of Economically Feasible Drug Discovery Projects. J. Chem. Inf. Model. 59(4): 1306-1313 (2019) - [c4]Vibudh Agrawal, Francesco Gentile, Michael Hsing, Fuqiang Ban, Artem Cherkasov:
Progressive Docking - Deep Learning Based Approach for Accelerated Virtual Screening. ICANN (Workshop) 2019: 737-740 - [i2]Zaccary Alperstein, Artem Cherkasov, Jason Tyler Rolfe:
All SMILES VAE. CoRR abs/1905.13343 (2019) - 2018
- [j31]Michael Fernández, Fuqiang Ban, Godwin Woo, Michael Hsing, Takeshi Yamazaki, Eric Leblanc, Paul S. Rennie, William J. Welch, Artem Cherkasov:
Toxic Colors: The Use of Deep Learning for Predicting Toxicity of Compounds Merely from Their Graphic Images. J. Chem. Inf. Model. 58(8): 1533-1543 (2018) - [i1]Qingyuan Feng, Evgenia V. Dueva, Artem Cherkasov, Martin Ester:
PADME: A Deep Learning-based Framework for Drug-Target Interaction Prediction. CoRR abs/1807.09741 (2018) - 2017
- [j30]Tong He, Marten Heidemeyer, Fuqiang Ban, Artem Cherkasov, Martin Ester:
SimBoost: a read-across approach for predicting drug-target binding affinities using gradient boosting machines. J. Cheminformatics 9(1): 24:1-24:14 (2017) - [j29]Fuqiang Ban, Kush Dalal, Huifang Li, Eric Leblanc, Paul S. Rennie, Artem Cherkasov:
Best Practices of Computer-Aided Drug Discovery: Lessons Learned from the Development of a Preclinical Candidate for Prostate Cancer with a New Mechanism of Action. J. Chem. Inf. Model. 57(5): 1018-1028 (2017) - 2016
- [j28]Naman Paul, Lavinia A. Carabet, Nada Lallous, Takeshi Yamazaki, Martin E. Gleave, Paul S. Rennie, Artem Cherkasov:
Cheminformatics Modeling of Adverse Drug Responses by Clinically Relevant Mutants of Human Androgen Receptor. J. Chem. Inf. Model. 56(12): 2507-2516 (2016) - 2013
- [j27]Huifang Li, Xin Ren, Eric Leblanc, Kate Frewin, Paul S. Rennie, Artem Cherkasov:
Identification of Novel Androgen Receptor Antagonists Using Structure- and Ligand-Based Methods. J. Chem. Inf. Model. 53(1): 123-130 (2013) - 2012
- [j26]Artem Cherkasov:
Targeting protein-protein interactions using methods of cheminformatics. J. Cheminformatics 4(S-1): 3 (2012) - 2011
- [j25]Iurii Sushko, Sergii Novotarskyi, Robert Körner, Anil Kumar Pandey, Matthias Rupp, Wolfram Teetz, Stefan Brandmaier, Ahmed Abdelaziz, Volodymyr V. Prokopenko, Vsevolod Yu. Tanchuk, Roberto Todeschini, Alexandre Varnek, Gilles Marcou, Peter Ertl, Vladimir Potemkin, Maria A. Grishina, Johann Gasteiger, Christof H. Schwab, Igor I. Baskin, Vladimir A. Palyulin, Eugene V. Radchenko, William J. Welsh, Vladyslav V. Kholodovych, Dmitriy Chekmarev, Artem Cherkasov, João Aires-de-Sousa, Qing-You Zhang, Andreas Bender, Florian Nigsch, Luc Patiny, Antony J. Williams, Valery Tkachenko, Igor V. Tetko:
Online chemical modeling environment (OCHEM): web platform for data storage, model development and publishing of chemical information. J. Comput. Aided Mol. Des. 25(6): 533-554 (2011) - [j24]Iurii Sushko, Anil Kumar Pandey, Sergii Novotarskyi, Robert Körner, Matthias Rupp, Wolfram Teetz, Stefan Brandmaier, Ahmed Abdelaziz, Volodymyr V. Prokopenko, Vsevolod Yu. Tanchuk, Roberto Todeschini, Alexandre Varnek, Gilles Marcou, Peter Ertl, Vladimir Potemkin, Maria A. Grishina, Johann Gasteiger, Igor I. Baskin, Vladimir A. Palyulin, Eugene V. Radchenko, William J. Welsh, Vladyslav V. Kholodovych, Dmitriy Chekmarev, Artem Cherkasov, João Aires-de-Sousa, Qing-You Zhang, Andreas Bender, Florian Nigsch, Luc Patiny, Antony J. Williams, Valery Tkachenko, Igor V. Tetko:
Online chemical modeling environment (OCHEM): web platform for data storage, model development and publishing of chemical information. J. Cheminformatics 3(S-1): 20 (2011) - 2010
- [j23]Alexander Schönhuth, Raheleh Salari, Fereydoun Hormozdiari, Artem Cherkasov, Süleyman Cenk Sahinalp:
Towards Improved Assessment of Functional Similarity in Large-Scale Screens: A Study on Indel Length. J. Comput. Biol. 17(1): 1-20 (2010) - [j22]Michael Hsing, Kendall G. Byler, Artem Cherkasov:
Prediction of highly-connected 'hub'-proteins in protein interaction networks using QSAR. J. Cheminformatics 2(S-1): 35 (2010) - [j21]Iurii Sushko, Sergii Novotarskyi, Robert Körner, Anil Kumar Pandey, Artem Cherkasov, Jiazhong Li, Paola Gramatica, Katja Hansen, Timon Schroeter, Klaus-Robert Müller, Lili Xi, Huanxiang Liu, Xiaojun Yao, Tomas Öberg, Farhad Hormozdiari, Phuong Dao, Süleyman Cenk Sahinalp, Roberto Todeschini, Pavel G. Polishchuk, Anatoly G. Artemenko, Victor Kuzmin, Todd Martin, Douglas M. Young, Denis Fourches, Eugene N. Muratov, Alexander Tropsha, Igor I. Baskin, Dragos Horvath, Gilles Marcou, Christophe Muller, Alexandre Varnek, Volodymyr V. Prokopenko, Igor V. Tetko:
Applicability Domains for Classification Problems: Benchmarking of Distance to Models for Ames Mutagenicity Set. J. Chem. Inf. Model. 50(12): 2094-2111 (2010)
2000 – 2009
- 2009
- [j20]Fereydoun Hormozdiari, Raheleh Salari, Michael Hsing, Alexander Schönhuth, Simon K. Chan, Süleyman Cenk Sahinalp, Artem Cherkasov:
The Effect of Insertions and Deletions on Wirings in Protein-Protein Interaction Networks: A Large-Scale Study. J. Comput. Biol. 16(2): 159-167 (2009) - 2008
- [j19]Michael Hsing, Artem Cherkasov:
Indel PDB: A database of structural insertions and deletions derived from sequence alignments of closely related proteins. BMC Bioinform. 9 (2008) - [j18]Michael Hsing, Kendall G. Byler, Artem Cherkasov:
The use of Gene Ontology terms for predicting highly-connected 'hub' nodes in protein-protein interaction networks. BMC Syst. Biol. 2: 80 (2008) - [j17]Hao Zhu, Alexander Tropsha, Denis Fourches, Alexandre Varnek, Ester Papa, Paola Gramatica, Tomas Öberg, Phuong Dao, Artem Cherkasov, Igor V. Tetko:
Combinatorial QSAR Modeling of Chemical Toxicants Tested against Tetrahymena pyriformis. J. Chem. Inf. Model. 48(4): 766-784 (2008) - [j16]Osvaldo Andrade Santos-Filho, Artem Cherkasov:
Using Molecular Docking, 3D-QSAR, and Cluster Analysis for Screening Structurally Diverse Data Sets of Pharmacological Interest. J. Chem. Inf. Model. 48(10): 2054-2065 (2008) - [c3]Raheleh Salari, Alexander Schönhuth, Fereydoun Hormozdiari, Artem Cherkasov, Süleyman Cenk Sahinalp:
The Relation between Indel Length and Functional Divergence: A Formal Study. WABI 2008: 330-341 - 2007
- [j15]Christopher D. Fjell, Robert E. W. Hancock, Artem Cherkasov:
AMPer: a database and an automated discovery tool for antimicrobial peptides. Bioinform. 23(9): 1148-1155 (2007) - [j14]Simon K. Chan, Michael Hsing, Fereydoun Hormozdiari, Artem Cherkasov:
Relationship between insertion/deletion (indel) frequency of proteins and essentiality. BMC Bioinform. 8 (2007) - [j13]Emre Karakoç, Artem Cherkasov, Süleyman Cenk Sahinalp:
Novel approaches for small biomolecule classification and structural similarity search. SIGKDD Explor. 9(1): 14-21 (2007) - [c2]Emre Karakoç, Süleyman Cenk Sahinalp, Artem Cherkasov:
Comparative QSAR Analysis of Bacterial-, Fungalplant- and Human Metabolites. Pacific Symposium on Biocomputing 2007: 133-144 - 2006
- [j12]Yvonne Y. Li, Steven J. M. Jones, Artem Cherkasov:
Selective Targeting of Indel-inferred Differences in Spatial Structures of Homologous Proteins. J. Bioinform. Comput. Biol. 4(2): 403-414 (2006) - [j11]Artem Cherkasov:
Can 'Bacterial-Metabolite-Likeness' Model Improve Odds of 'in Silico' Antibiotic Discovery?. J. Chem. Inf. Model. 46(3): 1214-1222 (2006) - [j10]Emre Karakoç, Süleyman Cenk Sahinalp, Artem Cherkasov:
Comparative QSAR- and Fragments Distribution Analysis of Drugs, Druglikes, Metabolic Substances, and Antimicrobial Compounds. J. Chem. Inf. Model. 46(5): 2167-2182 (2006) - [c1]Emre Karakoç, Artem Cherkasov, Süleyman Cenk Sahinalp:
Distance based algorithms for small biomolecule classification and structural similarity search. ISMB (Supplement of Bioinformatics) 2006: 243-251 - 2005
- [j9]Artem Cherkasov, Zheng Shi, Yvonne Y. Li, Steven J. M. Jones, Magid Fallahi, Geoffrey L. Hammond:
'Inductive' Charges on Atoms in Proteins: Comparative Docking with the Extended Steroid Benchmark Set and Discovery of a Novel SHBG Ligand. J. Chem. Inf. Model. 45(6): 1842-1853 (2005) - 2004
- [j8]Artem Cherkasov, Steven J. M. Jones:
Structural characterization of genomes by large scale sequence-structure threading. BMC Bioinform. 5: 37 (2004) - [j7]Artem Cherkasov, Steven J. M. Jones:
An approach to large scale identification of non-obvious structural similarities between proteins. BMC Bioinform. 5: 61 (2004) - [j6]Artem Cherkasov, Shannan J. Ho Sui, Robert C. Brunham, Steven J. M. Jones:
Structural characterization of genomes by large scale sequence-structure threading: application of reliability analysis in structural genomics. BMC Bioinform. 5: 101 (2004) - [j5]Michael Hsing, Joel L. Bellenson, Conor Shankey, Artem Cherkasov:
Modeling of cell signaling pathways in macrophages by semantic networks. BMC Bioinform. 5: 156 (2004) - 2003
- [j4]Artem Cherkasov:
Inductive Electronegativity Scale. Iterative Calculation of Inductive Partial Charges. J. Chem. Inf. Comput. Sci. 43(6): 2039-2047 (2003) - 2000
- [j3]Artem Cherkasov, Mats Jonsson:
A New Method for Estimation of Homolytic C-H Bond Dissociation Enthalpies. J. Chem. Inf. Comput. Sci. 40(5): 1222-1226 (2000)
1990 – 1999
- 1999
- [j2]Artem Cherkasov, Mats Jonsson:
Substituent Effects on Thermochemical Properties of C-, N-, O-, and S-Centered Radicals. Physical Interpretation of Substituent Effects. J. Chem. Inf. Comput. Sci. 39(6): 1057-1063 (1999) - 1998
- [j1]Artem Cherkasov, Mats Jonsson:
Substituent Effects on Thermochemical Properties of Free Radicals. New Substituent Scales for C-Centered Radicals. J. Chem. Inf. Comput. Sci. 38(6): 1151-1156 (1998)
Coauthor Index
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from 
to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the 
of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from 
, 
, and 
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from 
.
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2024-10-07 22:17 CEST by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by:
