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The Receiver Operational Characteristic for Binary Classification with Multiple Indices and Its Application to the Neuroimaging Study of Alzheimer's Disease

Published: 01 January 2013 Publication History

Abstract

Given a single index, the receiver operational characteristic (ROC) curve analysis is routinely utilized for characterizing performances in distinguishing two conditions/groups in terms of sensitivity and specificity. Given the availability of multiple data sources (referred to as multi-indices), such as multimodal neuroimaging data sets, cognitive tests, and clinical ratings and genomic data in Alzheimer's disease (AD) studies, the single-index-based ROC underutilizes all available information. For a long time, a number of algorithmic/analytic approaches combining multiple indices have been widely used to simultaneously incorporate multiple sources. In this study, we propose an alternative for combining multiple indices using logical operations, such as "AND,” "OR,” and "at least $(n)$” (where $(n)$ is an integer), to construct multivariate ROC (multiV-ROC) and characterize the sensitivity and specificity statistically associated with the use of multiple indices. With and without the "leave-one-out” cross-validation, we used two data sets from AD studies to showcase the potentially increased sensitivity/specificity of the multiV-ROC in comparison to the single-index ROC and linear discriminant analysis (an analytic way of combining multi-indices). We conclude that, for the data sets we investigated, the proposed multiV-ROC approach is capable of providing a natural and practical alternative with improved classification accuracy as compared to univariate ROC and linear discriminant analysis.

References

[1]
W.G. Rosen, R.C. Mohs, and K.L. Davis, "A New Rating Scale for Alzheimer's Disease," Am J. Psychiatry, vol. 141, pp. 1356-1364, 1984.
[2]
A. Rey, "L'examen Psychologique Dans Les Cas D'encephalopathie Traumatique," Archiv Psychologie, vol. 28, pp. 286-340, 1941.
[3]
J.C. Morris, "The Clinical Dementia Rating (CDR): Current Version and Scoring Rules," Neurology, vol. 43, pp. 2412-2414, 1993.
[4]
M.F. Folstein, S.E. Folstein, and P.R. McHugh, "Mini-Mental State a Practical Method for Grading the Cognitive State of Patients for the Clinician," J. Psychiatric Research, vol. 12, no. 3, pp. 189-198, 1975.
[5]
D.S. Karow, L.K. McEvoy, C. Fennema-Notestine, D.J. Hagler, R.G. Jennings, J.B. Brewer, C.K. Hoh, and A.M. Dale, "Relative Capability of MR Imaging and FDG PET to Depict Changes Associated with Prodromal and Early Alzheimer Disease," Radiology, vol. 256, pp. 932-942, 2010.
[6]
J.L. Whitwell, M.M. Shiung, S.A. Przybelski, S.D. Weigand, D.S. Knopman, B.F. Boeve, R.C. Petersen, and C.R. Jack, "MRI Patterns of Atrophy Associated with Progression to AD in Amnestic Mild Cognitive Impairment," Neurology, vol. 70, pp. 512-520, 2008.
[7]
Greicius MD et al., "Default-Mode Network Activity Distinguishes Alzheimer's Disease from Healthy Aging: Evidence from Functional MRI," Proc. Nat'l Academy of Sciences USA, vol. 101, pp. 4637-4642, 2004.
[8]
X. Wu et al., "Altered Default Mode Network Connectivity in Alzheimer's Disease--A Resting Functional MRI and Bayesian Network Study," Human Brain Mapping, vol. 32, pp. 1868-1881, 2011.
[9]
K. Herholz et al., "Discrimination between Alzheimer Dementia and Controls by Automated Analysis of Multicenter FDG PET," NeuroImage, vol. 17, pp. 302-316, 2002.
[10]
D.R. Thal et al., "Phases of a Beta-Deposition in the Human Brain and Its Relevance for the Development of AD," Neurology, vol. 58, pp. 1791-1800, 2002.
[11]
A.S. Fleisher et al., "Using Positron Emission Tomography and Florbetapir F 18 to Image Cortical Amyloid in Patients with Mild Cognitive Impairment or Dementia Due to Alzheimer Disease," Archives of Neurology, vol. 68, pp. 1404-1411, 2011.
[12]
D. Goodenough, K. Rossman, and L. Lusted, "Radiographic Applications of Receiver Operating Characteristic (ROC) Curves," Radiology, vol. 110, pp. 89-95, 1974.
[13]
J. Swets, "ROC Curve Analysis Applied to the Evaluation of Medical Imaging Techniques," Invest Radiology, vol. 14, pp. 109- 121, 1979.
[14]
C. Xiong et al., "Combining Correlated Diagnostic Tests: Application to Neuropathologic Diagnosis of Alzheimer's Disease," Medical Decision Making, vol. 24, no. 6, 659-669, 2004.
[15]
F. Gao et al., "Estimating Optimum Linear Combination of Multiple Correlated Diagnostic Tests at a Fixed Specificity with Receiver Operating Characteristic Curves," J. Data Science, vol. 6, pp. 1-11, 2008.
[16]
J. Ye et al., "Heterogeneous Data Fusion for Alzheimer's Disease Study," Proc. 14th ACM SIGKDD Int'l Conf. Knowledge Discovery and Data Mining (KDD), 2008.
[17]
N. Balakrishnan, Handbook of the Logistic Distribution. Marcel Dekker, Inc., 1991.
[18]
B. Krishnapuram et al., "Sparse Multinomial Logistic Regression: Fast Algorithms and Generalization Bounds," IEEE Trans Pattern Analysis and Machine Intelligence, vol. 27, no. 6, pp. 957-968, June 2005.
[19]
R.A. Fisher, "The Use of Multiple Measurements in Taxonomic Problems," Ann. of Eugenics, vol. 7, no. 2, pp. 179-188, 1936.
[20]
R.O. Duda, P.E. Hart, and D.H. Stork, Pattern Classification, second ed. Wiley Interscience, 2000.
[21]
R.A. Fisher, "The Statistical Utilization of Multiple Measurements," Ann. Eugenics, vol. 8, pp. 376-386, 1938.
[22]
V.N. Vapnik, The Nature of Statistical Learning Theory. Springer, 1995.
[23]
S.M. Landau et al., "Associations between Cognitive, Functional, and FDG-PET Measures of Decline in AD and MCI," Neurobiology of Aging, vol. 32, pp. 1207-1218, 2011.
[24]
K. Chen et al., "Linking Functional and Structural Brain Images with Multivariate Network Analyses: A Novel Application of the Partial Least Square Method," NeuroImage, vol. 47, pp. 602-610, 2009.
[25]
G.E. Alexander et al., "Age-Related Regional Network of MRI Gray Matter in the Rhesus Macaque," J. Neuroscience, vol. 28, no. 11, pp. 2710-2718, 2008.
[26]
R. Li et al., "Large-Scale Directional Connections among Multi Resting-State Neural Networks in Human Brain: A Functional MRI and Bayesian Network Modeling Study," NeuroImage, vol. 51, pp. 1035-1042, 2011.
[27]
E.K. Shultz, "Multivariate Receiver-Operating Characteristic Curve Analysis: Prostate Cancer Screening as an Example," Clinical Chemistry, vol. 41, pp. 1248-1255, 1995.
[28]
K. Chen et al., "The Alzheimer's Disease Neuroimaging Initiative, Characterizing Alzheimer's Disease Using a Hypometabolic Convergence Index," NeuroImage, vol. 56, pp. 52-60, 2011.
[29]
R. Li et al., "Attention-Related Networks in Alzheimer's Disease: A Resting Functional MRI Study," Human Brain Mapping, vol. 33, pp. 1076-88, 2011.
[30]
R. Payam, T. Lei, and L. Huan, "Cross Validation," Encyclopedia of Database Systems, M. Tamer Özsu and L. Liu, eds., Springer, 2009.

Cited By

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  • (2016)Name Similarity for Composite Element Name MatchingProceedings of the 7th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics10.1145/2975167.2975203(345-354)Online publication date: 2-Oct-2016

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Published In

cover image IEEE/ACM Transactions on Computational Biology and Bioinformatics
IEEE/ACM Transactions on Computational Biology and Bioinformatics  Volume 10, Issue 1
January 2013
270 pages

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IEEE Computer Society Press

Washington, DC, United States

Publication History

Published: 01 January 2013
Published in TCBB Volume 10, Issue 1

Author Tags

  1. Accuracy
  2. Alzheimer's dementia (AD)
  3. Alzheimer's disease
  4. Biomarkers
  5. Human computer interaction
  6. Indexes
  7. Neuroimaging
  8. Sensitivity and specificity
  9. multiV-ROC
  10. multiple indices
  11. receiver operational characteristic (ROC)

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  • (2016)Name Similarity for Composite Element Name MatchingProceedings of the 7th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics10.1145/2975167.2975203(345-354)Online publication date: 2-Oct-2016

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