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Attention-based Instance Segmentation Network for Cell Segmentation

Published: 23 January 2021 Publication History

Abstract

Segmentation of cell images has been widely explored in medical image analysis and clinical aided diagnoses. Instance segmentation technology, which can detect and distinguish each cell object has been a hot topic in recent years. However, the complex background interference and densely distribution in cell images always make the instance segmentation challenging. This study proposes a new instance segmentation algorithm based on the typical Mask R-CNN, named as attention-based instance segmentation network (AIS-Mask) for more accurate cell segmentation. Specially, an attention module is introduced and imposed on the top-down multi-scale information flow of the feature pyramid network (FPN) for extracting more efficient features and suppressing the background interference simultaneously. Experiments on the cell dataset from the Chinese cargo spacecraft TZ-1 demonstrate the impressing performance of our AIS-Mask under complex background interference. Both the quantitative evaluation and qualitative visual results show that the proposed AIS-Mask outperforms the state-of-the-art Mask R-CNN.

References

[1]
Wang, J.T., W.Y. Liu, and L.U. Shuo, Application of Watershed Algorithm to Cell Image Segmentation.Journal of Southwest Jiaotong University, 2002.p.290-294.
[2]
LeCun, Y., Y. Bengio, and G. Hinton, Deep learning.Nature, 2015. 521 (7553): p. 436-444.
[3]
Ronneberger, O., P. Fischer, and T. Brox, U-Net: Convolutional Networks for Biomedical Image Segmentation. Medical Image Computing and Computer-Assisted Intervention(MICCAI). 2015. p. 234-241.
[4]
Shelhamer, E., J. Long, and T. Darrell, Fully Convolutional Networks for Semantic Segmentation. IEEE Conference on Computer Vision and Pattern Recognition. 2015.p.3431-3440
[5]
Zhou, Z., UNet++: A Nested U-Net Architecture for Medical Image Segmentation. DLMIA. 2018.p.3-11
[6]
He, K.M., Mask R-CNN, IEEE International Conference on Computer Vision. 2017. p. 2980-2988.
[7]
Ren, S.Q., Faster R-CNN: Towards Real-Time Object Detection with Region Proposal Networks.IEEE Transactions on Pattern Analysis and Machine Intelligence, 2017. 39 (6): p. 1137-1149.
[8]
Kavukcuoglu, K., Recurrent Models of Visual Attention.Advances in Neural Information Processing Systems(NIPS), 2014.3: p. 2204-2212
[9]
Bahdanau, D., K. Cho, and Y. Bengio, Neural Machine Translation by Jointly Learning to Align and Translate, in ICLR. 2014. arXiv:1409.0473
[10]
Ba, J., V. Mnih, and K. Kavukcuoglu, Multiple Object Recognition with Visual Attention, in ICLR. 2015. arXiv:1412.7755
[11]
Oktay, O., Attention U-Net: Learning Where to Look for the Pancreas, MIDL. 2018. arXiv:1804.03999
[12]
Chen, L.C., Attention to Scale: Scale-aware Semantic Image Segmentation. IEEE Conference on Computer Vision and Pattern Recognition. 2016.p.3640-3649
[13]
Fu, J., Dual Attention Network for Scene Segmentation.IEEE Conference on Computer Vision and Pattern Recognition. 2019.p.3146-3154
[14]
Chen, H., BlendMask: Top-Down Meets Bottom-Up for Instance Segmentation. IEEE Conference on Computer Vision and Pattern Recognition. 2020.p.8573-8581
[15]
Shu, L., Path Aggregation Network for Instance Segmentation. IEEE Conference on Computer Vision and Pattern Recognition. 2018.p.8759-8768
[16]
Ghosh, S., Understanding Deep Learning Techniques for Image Segmentation. ACM Computing Surveys, 2019. arXiv:1907.06119
[17]
Oda, H., BESNet: Boundary-Enhanced Segmentation of Cells in Histopathological Images. 21st International Conference, Granada, Spain, September 16–20, 2018, Proceedings, Part II. 2018. p. 228-236.
[18]
Li, Y., Fully Convolutional Instance-aware Semantic Segmentation, in CVPR. 2016.p.2359-2367

Cited By

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  • (2024)Deep learning for quantifying spatial patterning and formation process of early differentiated human‐induced pluripotent stem cells with micropattern imagesJournal of Microscopy10.1111/jmi.13346296:1(79-93)Online publication date: 12-Jul-2024
  • (2024)Segmentation of Instances in an Image with Custom Neural Networks2024 3rd International Conference on Artificial Intelligence For Internet of Things (AIIoT)10.1109/AIIoT58432.2024.10574618(1-6)Online publication date: 3-May-2024

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cover image ACM Other conferences
ICCCV '20: Proceedings of the 3rd International Conference on Control and Computer Vision
August 2020
114 pages
ISBN:9781450388023
DOI:10.1145/3425577
Permission to make digital or hard copies of all or part of this work for personal or classroom use is granted without fee provided that copies are not made or distributed for profit or commercial advantage and that copies bear this notice and the full citation on the first page. Copyrights for components of this work owned by others than ACM must be honored. Abstracting with credit is permitted. To copy otherwise, or republish, to post on servers or to redistribute to lists, requires prior specific permission and/or a fee. Request permissions from [email protected]

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Association for Computing Machinery

New York, NY, United States

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Published: 23 January 2021

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Author Tags

  1. attention mechanism
  2. cell segmentation
  3. instance segmentation
  4. multi-scale features

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View all
  • (2024)Deep learning for quantifying spatial patterning and formation process of early differentiated human‐induced pluripotent stem cells with micropattern imagesJournal of Microscopy10.1111/jmi.13346296:1(79-93)Online publication date: 12-Jul-2024
  • (2024)Segmentation of Instances in an Image with Custom Neural Networks2024 3rd International Conference on Artificial Intelligence For Internet of Things (AIIoT)10.1109/AIIoT58432.2024.10574618(1-6)Online publication date: 3-May-2024

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