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- extended-abstractJuly 2018
Automated synchronization and boundary condition application for the Cactus Framework
PEARC '18: Proceedings of the Practice and Experience on Advanced Research Computing: Seamless CreativityArticle No.: 81, Pages 1–3https://doi.org/10.1145/3219104.3229256The Einstein Toolkit (ETK) is an open-source software platform for computational simulations in relativistic astrophysics and gravitational physics. The Cactus Framework (Cactus) comprises the core component of the ETK and handles creation of distributed ...
- extended-abstractJuly 2018
Simplifying Access to Campus Resources at Southern Illinois University with a Science Gateway
PEARC '18: Proceedings of the Practice and Experience on Advanced Research Computing: Seamless CreativityArticle No.: 98, Pages 1–4https://doi.org/10.1145/3219104.3229252Not all the researchers are comfortable in using High Performance Computing (HPC) Systems. Southern Illinois University's Office of Information Technology (OIT) Research Computing assists our researchers to get on these systems and use them for their ...
- research-articleJuly 2018
Seamless Utilization of Heterogeneous XSede Resources to Accelerate Processing of a High Value Functional Neuroimaging Dataset
PEARC '18: Proceedings of the Practice and Experience on Advanced Research Computing: Seamless CreativityArticle No.: 49, Pages 1–8https://doi.org/10.1145/3219104.3219161We describe the technical effort used to process a voluminous high value human neuroimaging dataset on the Open Science Grid with opportunistic use of idle HPC resources to boost computing capacity more than 5-fold. With minimal software development ...
- research-articleJuly 2018
Supporting distributed, interactive Jupyter and RStudio in a scheduled HPC environment with Spark using Open OnDemand
- Jeremy W. Nicklas,
- Doug Johnson,
- Shameema Oottikkal,
- Eric Franz,
- Brian McMichael,
- Alan Chalker,
- David E. Hudak
PEARC '18: Proceedings of the Practice and Experience on Advanced Research Computing: Seamless CreativityArticle No.: 26, Pages 1–8https://doi.org/10.1145/3219104.3219149Open OnDemand supports Interactive HPC web applications enabling the interactive and distributed environments for Jupyter and RStudio running on an HPC cluster. These web applications provide a simple user-interface for building and submitting the batch ...
- research-articleJuly 2018
SciApps: a Bioinformatics Workflow Platform Powered by XSEDE and CyVerse
PEARC '18: Proceedings of the Practice and Experience on Advanced Research Computing: Seamless CreativityArticle No.: 48, Pages 1–5https://doi.org/10.1145/3219104.3219109SciApps, a lightweight bioinformatics workflow system powered by the CyVerse infrastructure, uses the Agave Science API to manage the entire cycle of analysis jobs between XSEDE HPC and the CyVerse Data Store. SciApps provides a graphical user interface ...
