Abstract
Morphological analysis of longitudinal MR images plays a key role in monitoring disease progression for prostate cancer patients, who are placed under an active surveillance program. In this paper, we describe a learning-based image registration algorithm to quantify changes on regions of interest between a pair of images from the same patient, acquired at two different time points. Combining intensity-based similarity and gland segmentation as weak supervision, the population-data-trained registration networks significantly lowered the target registration errors (TREs) on holdout patient data, compared with those before registration and those from an iterative registration algorithm. Furthermore, this work provides a quantitative analysis on several longitudinal-data-sampling strategies and, in turn, we propose a novel regularisation method based on maximum mean discrepancy, between differently-sampled training image pairs. Based on 216 3D MR images from 86 patients, we report a mean TRE of 5.6 mm and show statistically significant differences between the different training data sampling strategies.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Similar content being viewed by others
References
Abadi, M., et al.: Tensorflow: Large-scale machine learning on heterogeneous distributed systems. arXiv preprint arXiv:1603.04467 (2016)
Balakrishnan, G., Zhao, A., Sabuncu, M.R., Guttag, J., Dalca, A.V.: Voxelmorph: a learning framework for deformable medical image registration. IEEE Trans. Med. Imaging 38(8), 1788–1800 (2019)
Bousmalis, K., Trigeorgis, G., Silberman, N., Krishnan, D., Erhan, D.: Domain separation networks. In: Advances in Neural Information Processing Systems, pp. 343–351 (2016)
Gretton, A., Borgwardt, K.M., Rasch, M.J., Schölkopf, B., Smola, A.: A kernel two-sample test. J. Mach. Learn. Res. 13(Mar), 723–773 (2012)
Hu, S., Wei, L., Gao, Y., Guo, Y., Wu, G., Shen, D.: Learning-based deformable image registration for infant MR images in the first year of life. Med. Phys. 44(1), 158–170 (2017)
Hu, Y., et al.: Weakly-supervised convolutional neural networks for multimodal image registration. Med. image anal. 49, 1–13 (2018)
Kim, C.K., Park, B.K., Lee, H.M., Kim, S.S., Kim, E.: MRI techniques for prediction of local tumor progression after high-intensity focused ultrasonic ablation of prostate cancer. Am. J. Roentgenol. 190(5), 1180–1186 (2008)
Liao, S., et al.: A novel framework for longitudinal atlas construction with groupwise registration of subject image sequences. NeuroImage 59(2), 1275–1289 (2012)
Modat, M., et al.: Fast free-form deformation using graphics processing units. Comput. Methods Programs Biomed. 98(3), 278–284 (2010)
Moore, C.M., et al.: Reporting magnetic resonance imaging in men on active surveillance for prostate cancer: the precise recommendations-a report of a european school of oncology task force. Eur. Urol. 71(4), 648–655 (2017)
Ronneberger, O., Fischer, P., Brox, T.: U-Net: convolutional networks for biomedical image segmentation. In: Navab, N., Hornegger, J., Wells, W.M., Frangi, A.F. (eds.) MICCAI 2015. LNCS, vol. 9351, pp. 234–241. Springer, Cham (2015). https://doi.org/10.1007/978-3-319-24574-4_28
Rueckert, D., Sonoda, L.I., Hayes, C., Hill, D.L., Leach, M.O., Hawkes, D.J.: Nonrigid registration using free-form deformations: application to breast MR images. IEEE Trans. Med. Imaging 18(8), 712–721 (1999)
Schwartz, E., Jakab, A., Kasprian, G., Zöllei, L., Langs, G.: A locally linear method for enforcing temporal smoothness in serial image registration. In: Durrleman, S., Fletcher, T., Gerig, G., Niethammer, M., Pennec, X. (eds.) STIA 2014. LNCS, vol. 8682, pp. 13–24. Springer, Cham (2015). https://doi.org/10.1007/978-3-319-14905-9_2
Simpson, I.J.A., Woolrich, M.W., Groves, A.R., Schnabel, J.A.: Longitudinal brain MRI analysis with uncertain registration. In: Fichtinger, G., Martel, A., Peters, T. (eds.) MICCAI 2011. LNCS, vol. 6892, pp. 647–654. Springer, Heidelberg (2011). https://doi.org/10.1007/978-3-642-23629-7_79
Tzeng, E., Hoffman, J., Zhang, N., Saenko, K., Darrell, T.: Deep domain confusion: Maximizing for domain invariance. arXiv preprint arXiv:1412.3474 (2014)
Vapnik, V.N.: An overview of statistical learning theory. IEEE Trans. Neural Netw. 10(5), 988–999 (1999)
Zhang, H., Cisse, M., Dauphin, Y.N., Lopez-Paz, D.: mixup: Beyond empirical risk minimization. arXiv preprint arXiv:1710.09412 (2017)
Acknowledgment
This work is supported by the Wellcome/EPSRC Centre for Interventional and Surgical Sciences (203145Z/16/Z), Centre for Medical Engineering (203148/Z/16/Z; NS/A000049/1), the EPSRC-funded UCL Centre for Doctoral Training in Intelligent, Integrated Imaging in Healthcare (i4health) (EP/S021930/1) and the Department of Health’s NIHR-fundedBiomedical Research Centre at UCLH. Francesco Giganti is funded by the UCL Graduate Research Scholarship and the Brahm Ph.D. scholarship in memory of Chris Adams.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2020 Springer Nature Switzerland AG
About this paper
Cite this paper
Yang, Q. et al. (2020). Longitudinal Image Registration with Temporal-Order and Subject-Specificity Discrimination. In: Martel, A.L., et al. Medical Image Computing and Computer Assisted Intervention – MICCAI 2020. MICCAI 2020. Lecture Notes in Computer Science(), vol 12263. Springer, Cham. https://doi.org/10.1007/978-3-030-59716-0_24
Download citation
DOI: https://doi.org/10.1007/978-3-030-59716-0_24
Published:
Publisher Name: Springer, Cham
Print ISBN: 978-3-030-59715-3
Online ISBN: 978-3-030-59716-0
eBook Packages: Computer ScienceComputer Science (R0)