Abstract
Carvedilol is among the most effective β-blockers for improving survival after myocardial infarction. Yet the mechanisms by which carvedilol achieves this superior clinical profile are still unclear. Beyond blockade of β1-adrenoceptors, arrestin-biased signalling via β2-adrenoceptors is a molecular mechanism proposed to explain the survival benefits. Here, we offer an alternative mechanism to rationalize carvedilolâs cellular signalling. Using primary and immortalized cells genome-edited by CRISPR/Cas9 to lack either G proteins or arrestins; and combining biological, biochemical, and signalling assays with molecular dynamics simulations, we demonstrate that G proteins drive all detectable carvedilol signalling through β2ARs. Because a clear understanding of how drugs act is imperative to data interpretation in basic and clinical research, to the stratification of clinical trials or to the monitoring of drug effects on the target pathway, the mechanistic insight gained here provides a foundation for the rational development of signalling prototypes that target the β-adrenoceptor system.
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Introduction
Understanding the mechanism of drug action is no prerequisite for a drug to obtain approval from regulatory authorities, but a solid foundation for evidence-based decision-making along all stages of the drug discovery process1,2. Conversely, if the mechanism of drug action remains enigmatic, or if consensus is lacking on how precisely a drug alters the function of its protein target, the molecular basis for therapeutic efficacy will remain obscure.
Carvedilol, a widely prescribed cardiovascular medication, is a case in point. It belongs to a class of drugs known as beta receptor blockers (β-blockers), which are commonly used to treat hypertension and heart failure3,4,5. β-blockers are particularly effective in patients where myocardial damage is associated with overstimulation of β-adrenoceptors (βARs). βARs are prototypical class A G protein-coupled receptors (GPCRs), the targets for the majority of prescription drugs in clinical use6,7. βARs are also among the most powerful regulators of cardiac function8, and the primary targets for the endogenous catecholamines adrenaline and noradrenaline, which act as neurotransmitters and hormones to control heart rate and blood pressure9. β-blockers oppose the stimulating effects of catecholamines, which explains their efficacy in the clinic to reduce heart rate and contractility and, consequently, lower the cardiac oxygen demand.
From a pharmacological perspective, β-blockers are highly heterogeneous as they differ in their β1-(cardio)selectivity10, antioxidant11 or vasodilative α1AR-blocking properties12, as well as their ability to also stimulate βARs to some extent13,14. This latter property was initially referred to as intrinsic sympathomimetic activity (ISA)15 and likely rationalizes a number of clinical benefits such as less reduction in resting and maximal exercising heart rate and consequently less reduction in cardiac output, less upregulation of βARs after long-term treatment and a lower mortality rate in secondary prevention after myocardial infarction16. Despite the apparent benefits associated with ISA and the use of β-blockers for more than five decades, the signal transduction mechanisms underlying the low efficacy βAR activation are still unclear.
To clarify these mechanisms, we here take advantage of carvedilol, a non-selective β-blocker with ISA and additional antioxidant activity17, as well as α1AR and ryanodine receptor blocking properties18,19,20,21. We chose carvedilol for several reasons: (i) it is among the most effective β-blockers for improving survival after myocardial infarction22,23, (ii) it is one out of four β-blockers approved for the treatment of heart failure but the only one in this subgroup with β2-ISA24 and (iii) it is frequently presented and used as a prototype to portray a paradigmatic signalling mechanism: G protein-independent, arrestin-dependent signalling, also known as arrestin-biased signalling25,26. Arrestin-biased signalling via β2AR was even hypothesized to explain the favourable clinical profile of carvedilol27.
In the arrestin signalling paradigm, the core signalling unit is composed of a GPCR, arrestin-2 and arrestin-3 (hereafter arr2 and arr3) and mitogen-activated protein kinases (MAPK) of the extracellular signal-regulated kinase (ERK) family but does not include heterotrimeric G proteins, the main transducers of GPCR signals25,26. Although recent investigations attempt to soften the strict separation between G protein and arrestin-driven signalling28,29, the G protein versus arrestin dichotomy still remains the molecular pillar for the ligand bias paradigm30. The importance of arrestin-biased signalling in basic and clinical research is best exemplified by the large and steadily increasing number of >17,000 research documents (as tracked by Google Scholar) during the last two decades examining various aspects of this signalling mode in vitro and in vivo26,28,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46
Intrigued by the notion that (i) endogenous bona fide arrestin-biased receptors do not evoke ERK/MAPK phosphorylation47,48, (ii) arrestins are dispensable for the initiation of GPCR signalling to ERK44,49 and (iii) arrestin-dependent MAPK activation requires the presence of active G proteins35,50,51, we here chose the purported arrestin-biased carvedilol to shed more light on this enigmatic signalling mechanism.
In this work, we use well-validated cell models, genome-edited by CRISPR/Cas9, that either lack Gα proteins or arrestins, along with primary cardiomyocytes and a battery of signalling, biological and biochemical assays to propose that carvedilol induces all detectable cellular signalling via low intrinsic activation of heterotrimeric G proteins. Our investigations clarify the molecular mechanisms underlying the ISA of carvedilol at β2ARs and have major implications for the evidence-based use of β-blockers in clinical practice. If ISA is indeed the distinctive feature that explains why some β-blockers are superior over others in heart failure clinical trials, our study resolves the conundrum as to why β-blockers with ISA prolong the life of heart failure patients.
Results
Carvedilol initiation of signalling downstream of β2AR requires Gs proteins
The prevailing theory classes carvedilol as an arrestin-biased ligand at β2AR27, a signalling mode even proposed to explain the survival benefits for patients in heart failure clinical trials52. Traditionally, arrestin-biased signalling is recorded as phosphorylation of ERK MAP kinases53. However, all four classes of heterotrimeric G proteins, Gi/o, Gs/olf, Gq/11 and G12/13, also phosphorylate ERK54. Convergence of independent G protein and arrestin pathways on a common effector makes a clear-cut assignment of the upstream transducer technically difficult, if not impossible. Hence, to overcome this limitation and to clarify how carvedilol activates ERK via β2AR, cell lines with selective deletion of either G proteins or β-arrestins are mandatory. We took advantage of CRISPR/Cas9-based HEK293 knockout cell lines, engineered to lack expression of arr2 and arr3 (hereafter Îarr2/3)49,51, or of the three Gα subunit families Gαs/olf, Gαq/11 and Gα12/13 (hereafter Îsix, reflecting deletion of six endogenous Gα proteins)50. Because Îsix cells still express endogenous Gαi/o subunits, pre-treatment with pertussis toxin (PTX) is demanded to achieve the condition of âzero functional Gâ (hereafter Îsix + PTX).
To minimize inter-assay variability across our CRISPR cell lines, we stably overexpressed β2AR at comparable cell surface abundance (Supplementary Fig. 1). We fused a SNAP-tag to the β2AR N-terminus to visualize receptor expression and to permit direct comparison of both cellular signalling and spatiotemporal distribution within the same cellular background. The addition of the SNAP-tag did not impair ligand binding to or function of β2AR (Supplementary Fig. 2)55.
In agreement with active signalling14,56,57,58,59, carvedilol-stimulated ERK phosphorylation in a transient and time-dependent manner and with lower efficacy as observed for the full synthetic agonist isoproterenol (ISO) (Fig. 1a). ERK phosphorylation was preserved in cells lacking arr2/3 (Fig. 1b), undetectable at zero functional G (Îsixâ+âPTX, Fig. 1c) or in cells endowed with endogenous Gi/o proteins (Supplementary Fig. 3) but re-emerged with Gαs re-expression (Fig. 1d). Seemingly, carvedilol-induced MAPK activation does not conform to an arrestin-biased signalling pattern but is, instead, genuinely initiated by Gs family proteins. In line with this notion, carvedilol-induced cell morphology changes as detected with a label-free optical biosensor, which provides real-time measures for global cell activation, were strictly Gαs protein-driven (Fig. 1eâh and Supplementary Fig. 4). Apparently, Gs proteins play a pivotal role in relaying β2AR activation to intracellular effectors.
Activation of Gs family proteins typically stimulates the production of the second messenger cAMP by adenylyl cyclase (AC) isoforms60. Indeed, cAMP abundance was enhanced by the action of carvedilol at the β2AR, and this effect was nullified only in G protein-deficient cells yet partially recovered with Gαs re-expression (Fig. 1iâl and Supplementary Fig. 5). Thus, the entire set of cellular responses evoked with carvedilol showed equivalent dependence on Gs. Arrestins, on the contrary, were dispensable for initiation of all downstream signals, even those transmitted to pERK, the hallmark feature of arrestin-biased signalling25,26,27,53.
Carvedilol-occupied β2ARs recruit and stimulate Gs
Gs dependence on carvedilol signalling led us to investigate its capacity to promote the transition of β2AR into an active state conformation. To this end, we used miniGs, a G protein surrogate composed of the engineered GTPase domain of Gαs, as a conformational sensor for the active receptor state61,62,63. We probed β2AR miniGs interaction with an assay based on enzyme complementation between split fragments of NanoLuc® luciferase fused to the β2AR and miniGs, respectively (NanoBiT assay principle in Fig. 2a). Cells transfected with the split sensor pair led to detectable increases in luminescence signals upon carvedilol addition and revealed slower kinetics as well as lower maximal amplitudes than those elicited by ISO (Fig. 2a and Supplementary Fig. 6). No such effect for carvedilol was observed in cells transfected with β2AR and miniGi (Supplementary Fig. 7), in agreement with the absence of detectable Gi/o signalling for carvedilol in both pERK and whole cell activation assays. β2AR-Gs interaction was confirmed when we altered the labelling strategy to detect bioluminescence resonance energy transfer (BRET) between NanoLuc®-tagged β2AR and Venus-tagged miniGs (Supplementary Fig. 8). From these data, we concluded that carvedilol-induced proximity between β2AR and miniGs, albeit slower in onset and with reduced maximal amplitude as compared to the effect evoked by ISO.
Because Nanoluciferase complementation assays measure effector recruitment but not signalling, we monitored ligand-mediated dynamic changes of cAMP utilizing an EPAC-based FRET biosensor (schematic of sensor in Fig. 2b). Temporal resolution of cAMP abundance as net result of its production and breakdown revealed concentration-dependent enhancement by carvedilol, slower and less efficacious as the effect induced by ISO (Fig. 2b). Carvedilol-induced cAMP formation was further amplified when its breakdown by phosphodiesterases (PDEs) was specifically interdicted with the pan-PDE inhibitor IBMX (Fig. 2b). Apparently, the cellular cAMP pool, elevated by carvedilol via β2ARs, is tightly controlled by active PDEs.
Cytosolic cAMP levels result from a fine balance of second messenger formation by AC isoforms and degradation by PDEs. Entirely consistent with Gs recruitment (Fig. 2a and Supplementary Fig. 8) and signalling (Fig. 2b), carvedilol also promoted molecular proximity between Gαs and AC as read out by NanoLuc®-based enzyme complementation between Gαs fused to the large and AC5 fused to the small fragment of Nanoluciferase, respectively (Fig. 2c and Supplementary Fig. 9). From these data we concluded that carvedilol exerts its detectable cellular signals by activation of the β2AR-Gs-AC-cAMP signalling axis.
Carvedilol elevates cAMP and spontaneous beating in primary cardiomyocytes
Cardiomyocyte cAMP synthesis after β-adrenergic activation is a fundamental physiological process in the cardiovascular system that impacts beat-to-beat heart contraction and relaxation in order to adjust cardiac output to the oxygen demand of the body64. It is, therefore, imperative to investigate whether carvedilol also elevates cAMP in cardiomyocytes, where βARs are endogenously expressed. We used the genetically encoded plasma membrane-localized Epac-based FRET sensor pmEpac1-camps to read out cAMP dynamics in adult murine ventricular myocytes (Fig. 3a)65. Consistent with our previous findings in β2AR-HEK293 cells (cf. Fig. 2b), treatment with ISO or carvedilol alone led to detectable increases in cAMP levels and their effects were further enhanced when forskolin, a direct AC activator, was coapplied with IBMX to define the maximum possible FRET change for each cardiomyocyte (Fig. 3b). Pre-treatment of cells with ICI-118,551 (ICI), a β2-selective antagonist, abolished carvedilol-induced cAMP formation, while pre-treatment with CGP-20712A (CGP), a β1-AR selective inhibitor, had no effect (Fig. 3b, c). We concluded that carvedilol enhances cAMP formation in primary adult cardiomyocytes by specific activation of β2AR.
To investigate whether carvedilol-induced cAMP elevation translates into speeding up of spontaneous cardiomyocyte beating, we utilized the label-free, impedance-based CardioExcyte96 detection platform, which permits non-invasive recording of beating frequency in real-time66. Congruent with the notion that β1 and β2ARs contribute to contractile responses of both embryonic and adult cardiomyocytes67, ISO, a mixed β1 and β2AR agonist as well as carvedilol, which elevates cAMP via β2AR, measurably increased the beating frequency of neonatal mouse ventricular myocytes (Fig. 3d). ISO-enhancement of beating frequency was countered by pre-treatment with the β2-preferring ICI and the β1-preferring CGP antagonists (Fig. 3e, f). Because β1AR has a larger impact on β-adrenergic control of spontaneous cardiomyocyte beating (Supplementary Fig. 10), and because the predominant action of carvedilol is blockage of β1AR, we reasoned that β1 inhibition by carvedilol might mask its own low efficacy β2 activation68. Indeed, carvedilol enhancement of spontaneous beating was small but significant, unmasked in the presence of CGP (β2AR stimulation permitted), and fully reversed by ICI (β2AR stimulation countered) (Fig. 3g, h). We concluded that the detectable positive signals of carvedilol in cardiomyocytes originate from specific activation of the β2AR-Gs-AC-cAMP axis. Thus, in addition to limiting the effects of catecholamine excess (classical β1 blockade), carvedilol activates β2AR and thereby provides some background sympathetic activity via low efficacy G protein signalling. Given that β1 but not β2ARs are downregulated in heart failure69,70,71,72 along with β2AR redistribution from the T-tubules to the cell crest, giving rise to cell-wide cAMP propagation in the failing cardiomyocyte73, it is conceivable that low efficacy β2AR activation even occurs in human heart failure patients and may contribute to the positive effect of carvedilol.
Carvedilol does not promote detectable internalization of β2AR
Of the possible mechanisms by which carvedilol could drive its activating signals (G proteins versus arrestins or even as yet unidentified effectors), low efficacy G protein signalling is clearly the most likely. Nevertheless, carvedilol may still be unique among β-blockers in that low efficacy G protein signalling is linked to disproportionately large desensitization. Because this assumption has not been directly tested yet, we investigated carvedilol-stimulated internalization of β2AR. In agreement with earlier findings74, ligand-stimulated internalization of β2AR in HEK293 cells is an arrestin-dependent process (Supplementary Fig. 11). However, to our surprise, and unlike previously proposed27 carvedilol did not visibly alter β2AR redistribution in living β2AR-HEK293 cells in contrast to the robust endocytosis achieved with ISO (Fig. 4a and Supplementary Fig. 12). Line scan analysis confirmed β2AR confinement to the plasma membrane in the absence of agonist, as shown by the two sharp fluorescence peaks flanking the low fluorescence cytoplasmic area (Fig. 4b). Carvedilol did not alter fluorescence intensity distribution in contrast to ISO, which dampened plasma membrane but enhanced cytoplasmic fluorescence (Fig. 4b). Apparently, the conformational change produced by carvedilol does not promote detectable β2AR internalization, contrary to a previous study27, but in agreement with other works75,76.
Whilst fluorescence microscopy is well-suited to qualitatively examine how GPCR ligands alter receptor location in living cells77,78, the effects produced by low efficacy ligands may be transparent to this technique. We, therefore, quantified in real-time the loss of surface β2AR using the sensitive diffusion-enhanced resonance energy transfer (DERET) technology (Fig. 4c)79,80,81,82. Carvedilol induced no observable internalization of plasma membrane-localized β2AR over time in contrast to the rapid and pronounced receptor loss evoked by ISO (Fig. 4d).
GPCRs are highly mobile but become immobilized in clathrin-coated pits (CCPs) prior to their removal from the cell surface83. We used a single-particle tracking analysis to study β2AR trapping in CCPs to understand why carvedilol does not visibly internalize β2AR in living cells. To this end, we simultaneously imaged the plasma membrane diffusion of β2AR and clathrin, fused to a SNAP-tag and GFP, respectively84, using fast two-colour single-molecule microscopy combined with single-particle tracking55. Carvedilol did not significantly alter β2AR lateral mobility when compared to the effects induced by solvent and did not significantly promote the occurrence of β2ARs in CCPs (Fig. 4e, f). ISO-stimulated receptors, in contrast, rapidly accumulated and became trapped in CCPs (Fig. 4e, f), consistent with altered diffusional mobility of the entire receptor population (Fig. 4g). This can be assigned to receptor trapping because the diffusion coefficient of the freely diffusing population was largely unaffected by any treatment regimen (Fig. 4g). Viewed collectively, three complementary methods indicate that carvedilol produces a β2AR conformation that is signalling competent, yet unable to undergo detectable internalization.
Carvedilol-bound β2AR is a poor target for arrestin binding
After activation, GPCRs localize to CCPs via their interaction with arrestins and other endocytic proteins such as adapter protein 2 (AP-2)85. Because CCP trapping requires prior arrestin recruitment86, we speculated that enrichment of cells with exogenous arrestins and possibly G protein-coupled receptor kinases (GRKs) to enhance the affinity of arrestin for the receptor87,88,89, might boost carvedilol-dependent internalization. However, overexpression of GRK2, arr3 or both in β2AR-HEK293 cells failed to promote measurable receptor internalization in response to carvedilol, while the same transfection regime effectively enhanced the effect of ISO (Fig. 5a). Clearly observable β2AR internalization for ISO but not carvedilol was also evident from line-scans of the acquired images (Fig. 5b) and confirmed by DERET-based quantification of β2AR surface loss (Fig. 5c, d). These data suggest that the lack of measurable β2AR internalization in our β2AR-HEK293 cells is not due to an insufficient abundance of endocytosis adaptors and cannot be enforced even if these are overexpressed.
Therefore, we speculated that carvedilol-occupied β2AR may be a poor target for arrestin binding. To test this assumption, we determined ligand-induced arrestin recruitment to β2AR using a number of complementary protein-protein interaction assays. Regardless of whether we used split Nanoluciferase (NanoBiT-based) enzyme complementation between β2AR fused to the small (β2AR-SmBiT) and arrestin-2/3 fused to the large NanoLuc® fragment (LgBiT-arr2/3) (Fig. 5e, f and Supplementary Fig. 13), β2AR-NanoLuc® in combination with Venus-arr3 (Supplementary Fig. 14), or β2AR-SmBiT along with AP-2 nonbinding versions of LgBiT-arr2/3 to extend the lifetime of the luminescence signal (Fig. 5g and Supplementary Fig. 15)86,90, β2ARs recruited neither arrestin isoform after carvedilol addition despite exogenous expression of all components.
A notable difference between our data and the original report is that experimental evidence supporting arrestin recruitment by carvedilol-activated β2AR was collected with a β2AR chimera, wherein the C-tail has been swapped with that of the vasopressin V2 receptor (β2V2)27. This modification converts β2AR from a transient (class A) to a stable (class B) arrestin-binder91 to produce long-lived receptor arrestin complexes92,93. To our surprise, in our hands even carvedilol-bound β2V2 did not recruit arrestins in two complementary BRET approaches, using pairs of β2V2 C-terminally fused to EYFP and Renilla luciferase fused to arrestin-3 (RLuc-arr3) as well as β2V2 fused to NanoLuc® and Halo-Tag-labelled arr3 (Fig. 5h and Supplementary Fig. 16). Consistent with the lack of arrestin recruitment, carvedilol neither promoted appreciable internalization of β2V2 (Supplementary Fig. 17a, b) nor diminished its surface abundance (Supplementary Fig. 17c). ISO, in contrast, enabled robust arrestin recruitment irrespective of the BRET labelling strategy (Fig. 5h), and effectively promoted β2V2 internalization and surface loss (Supplementary Fig. 17). As a caveat to our posit, it remains possible that carvedilol is a very slow and low efficacy agonist also for arrestin recruitment and internalization, but that current assays may lack sensitivity and/or timescale to detect this low efficacy at the maximum possible concentration. Collectively, our complementary experimental evidence strongly suggests that carvedilol cannot be considered arrestin-biased because it does not demand arrestins for initiation of signalling or desensitization purposes.
Ligand-specific β2AR phosphorylation and unbiased molecular dynamics simulations fully explain carvedilolâs signalling profile
Interaction with arrestins requires the receptor to be phosphorylated at multiple sites by various GRK isoforms32,94, and this, in turn, necessitates ligand-induced transition to a particular active conformation95. Puzzled by the absence of arrestin recruitment to β2V2, we speculated that carvedilol may be unable to produce this particular active state. We tested our assumption with a conformation-specific nanobody (Nb80), generated previously to sense the fully active β2AR96. As expected, ISO robustly recruited Nb80 to β2AR as determined by NanoLuc® complementation between β2AR-smBiT and Nb80-LgBiT (Fig. 6a and Supplementary Fig. 18). However, contrary to miniGs which was recruited by carvedilol to β2AR (cf. Fig. 2a), Nb80 was not (Fig. 6a and Supplementary Fig. 18). Apparently, the signalling competent conformation stabilized by carvedilol remains unnoticed by Nb80, consistent with the earlier finding that Nb80 does not shift the affinity of carvedilol for the β2AR97.
To capture the differences between ISO- and carvedilol-liganded β2AR in atomic detail, we used metadynamics molecular dynamics simulations. Within the measure to track activation98, we find that carvedilol stabilizes a conformation that is distinct from both the ISO-induced active state and the unliganded receptor in the apo-state (Fig. 6b). ISO stabilizes a clearly active state, signified by the preservation of the second intracellular loop ICL2 as an α-helix (Fig. 6c), and often accompanied by the formation of a hydrogen bond between Y141ICL2 and D1303.49 of the highly conserved DRY motif (Fig. 6c)99. Carvedilol, in contrast, does not stabilize the same active state but another conformation with molecular features compatible with partial Gs protein activation (Fig. 6c and Supplementary Methods to provide more detailed technical descriptions).
Complementary to Nb80 and MD simulations, we used the phosphorylation-independent arrestins arr3-R170E and arr3-F388A as conformational reporters for active state receptors. Consistent with their phosphorylation-independence100,101,102,103, arr3-R170E and arr3-F388A were effectively recruited to β2AR by ISO, both in the presence and collective genetic absence of GRK2/3/5/688 (Fig. 6d, e). Carvedilol, in contrast, was completely ineffective (Fig. 6d, e), which is why we concluded that its conformational adjustment of the intracellular receptor face suffices exclusively for initiation of low efficacy Gs signalling but neither for recognition by active state conformational biosensors nor by endocytic adaptors. We surmised that carvedilol-liganded β2AR may be no or, alternatively, an inherently poor target for GRK phosphorylation and arrestin binding.
The phosphorylation barcode hypothesis states that ligand-specific phosphorylation patterns direct distinct functional outcomes104. Because carvedilol signals via the Gs-cAMP pathway in the absence of detectable desensitization, we used phosphosite-specific antibodies to probe β2AR phosphorylation at both PKA and GRK sites (Fig. 6f). Entirely consistent with all our earlier data, carvedilol-stimulated phosphorylation of β2AR at position S261, a known PKA site but not at positions S355/S356 and T360/S364, two well-established GRK sites105,106,107,108, even in the presence of overexpressed GRK2 and 6 (Fig. 6g). ISO, in contrast, promoted robust phosphorylation at all sites, entirely consistent with Gs signalling and subsequent GRK-mediated desensitization (Fig. 6g)109. Because PKA site phosphorylation does not result in arrestin recruitment110,111, our site-specific phosphorylation analyses reconcile both the positive cellular signals induced by carvedilol via the Gs-AC-cAMP axis and the resistance of β2AR to carvedilol-induced internalization/desensitization.
Viewed collectively, our study calls into question the dogmatic classification of carvedilol as an arrestin-biased ligand27, but provides, instead, the relevant mechanistic framework to reclassify the mode of action of one of the most popular beta-blockers, and how it induces its positive signals in living cells.
Discussion
β-blockers are widely prescribed medications to treat cardiovascular diseases such as hypertension and heart failure3,4,5. Yet, despite their introduction into clinical practice over five decades ago and their widespread clinical use, the mechanisms by which β-blockers achieve favourable clinical profiles are still not clearly defined. If mechanisms transform into explanations for clinical phenotypes, i.e. become associated with survival benefits for patients, then delineating such enabling mechanisms should be mandatory if not imperative. This was the goal of the present study, and the uncovered mechanism that carvedilol exerts its positive signalling through β2AR via low efficacy G protein activation is our major finding.
Akin to all βAR-blocking agents, the predominant action of carvedilol is to counter the stimulating effects of endogenous catecholamines by antagonizing β1 and β2ARs, but it also possesses some residual agonistic activity, proposed to explain its uniqueness over other β-blockers in heart failure clinical trials27. The question of how carvedilol achieves this positive signalling has puzzled scientists for decades, but, despite this, the enabling mechanism is still undefined. Our study resolves this conundrum and clarifies, unambiguously, that the unique signalling activity of carvedilol at β2AR arises from low efficacy activation of heterotrimeric Gs proteins but does not require contribution from arrestins. Our results are mechanistically consistent with earlier findings obtained with carvedilol on human explants from adult ventricular myocardium24 and on membranes from a transgenic rat model for left ventricular pressure overload72 detecting GTP-modifiable binding, a hallmark feature of G protein activation. They also agree with independent investigations showing enhancement by carvedilol of bulk cytosolic cAMP14,68, of membrane-delimited and spatially restricted cAMP as detected with FRET-based cAMP reporters56, and of cAMP-induced transcriptional changes as determined in CRE-reporter gene assays57. Notably, the measured cAMP elevations were small when detected as bulk cAMP in the cytosol14,56, larger when assessed with spatially restricted cAMP sensors close to the plasma membrane56, and amplified even further when measured at the level of gene transcription14. If cAMP is the messenger produced by the action of carvedilol at the β2AR, the signalling components typically involved are Gs proteins, which subsequently activate adenylyl cyclases to convert ATP to cAMP. Indeed, our study showed that carvedilol-mediated cAMP production was abrogated in cells genome-edited by CRISPR/Cas9 to lack all functional Gαs alleles, but re-emerged when Gαs was introduced by transient transfection. Intriguingly, carvedilol-mediated ERK phosphorylation, the hallmark feature of arrestin-biased signalling, showed an equivalent dependence on Gs, while arrestins were dispensable to elicit positive ERK signals.
Therefore, the mechanism proposed here is distinct from arrestin-biased signalling, which was proposed for carvedilol in earlier studies27. Yet, it is entirely consistent with the notion that low efficacy G protein activation does not trigger desensitization and is, therefore, not associated with arrestin recruitment, as shown herein and previously by others112,113,114. Notably, carvedilol is being applied in preclinical research to implicate arrestin-biased signalling in diverse experimental paradigms33,34. These results call for a more cautious interpretation in this regard because the outcome of the present study clearly puts forward an alternative scenario to account for the positive cellular signalling of carvedilol: low efficacy activation of heterotrimeric G proteins rather than arrestin-biased signalling.
Arrestin-biased signalling has been a recurring theme of β-blocker action proposed not only for carvedilol but also for additional β-blockers with agonist activity, such as the β2-selective ICI-118,551 or the non-selective propranolol115. In defence of the authors of these previous studies, the claims were made when it was technically impossible to eliminate all relevant G proteins in the applied cellular systems116,117. We speculate that these other β2AR ligands, hypothesized to signal through β-arrestins115,118 or an alternative G protein-independent mechanism14, likely adopt the same signalling mode as shown herein for carvedilol, i.e. transmit their positive signals by low efficacy G protein activation. However, unlike carvedilol, propranolol is not approved for the treatment of heart failure. This is surprising considering the significant reduction in mortality achieved with propranolol in clinical studies of heart failure patients with prior myocardial infarction119,120. The new insight into carvedilol signalling provided herein may therefore herald the comeback of molecular mechanisms, initially defined as ISA15 but subsequently confounded with arrestin-biased signalling27. Carvedilol is still classed as arrestin-biased ligand33,34,121. We propose to reclassify this ligand and denote its positive signalling as partial G protein agonism.
One caveat that deserves specific mention is that the majority of assays to disentangle G protein versus arrestin-biased signalling were performed in overexpression systems. Hence, extrapolation of our data to primary cells or the in vivo situation must be performed with caution and highlight the need to re-investigate the mechanism by which carvedilol exerts its positive signals once comparable techniques become available for primary cells or even whole animals.
Notwithstanding these caveats, our new knowledge adds value to the future use of β-blockers in humans: Insight into how precisely drugs alter the function of their molecular targets is the foundation to inform the design of screens, to develop biological assays that visualize the proposed mechanism, to identify suitable disease models, to stratify patients for clinical trials, to identify biomarkers for therapeutic efficacy on the target pathway even in patients and, finally, to conceptualize improved or even novel types of medicines with superior efficacy and benefit for patients. β-blockers are a class of medicines, which are widely used to treat hypertension, to protect against recurrent heart attacks and hence to prolong the life of heart failure patients3,4,5. If ISA does indeed explain why some β-blockers are superior to others in the treatment of heart failure, our study solves the enigma of why β-blockers with ISA prolong the life of heart failure patients.
Methods
Chemical reagents and antibodies
Coelenterazine was purchased from Carbosynth. Linear polyethylenimine (PEI, 25âkDa) was supplied by Polyscience. FuGENE® HD Transfection Reagent, furimazine (NanoGlo®), HaloTag® NanoBRET⢠618 ligand and T4 DNA ligase were from Promega. Phosphosite-specific antibodies pS355/pS356-β2 (Cat. no.: 7TM0029A) and pT360/pS364-β2 (Cat. no.: 7TM0029B) were from 7TM Antibodies, and the antibody against pS261 (Cat. no.: PA5-12977) was from Invitrogen. Anti-HA-tag antibodies were purchased from Cell Signaling Technology. Hanks balanced salt solution (HBSS), Dulbeccoâs modified Eaglesâs medium (DMEM), Lipofectamin 2000, HA-beads, TetraSpeck fluorescent beads, 96-well white polystyrene LumiNunc microplates, all antibiotics and pertussis toxin (PTX) were from Thermo Fisher. The HTRF cAMP accumulation kit and the DERET substrate, SNAP-Lumi4-Tb, were purchased from Cisbio. SNAP-Surface Alexa Flour 488, SNAP-Surface Alexa Flour 549, SNAP-Surface Alexa Flour 649, Q5® High-Fidelity polymerase, NotI-HF®, ApaI, anti-SNAP-tag antibody (Cat. no.: P9310S) were obtained from New England Biolabs (NEB). Effectene was from Qiagen. All other chemicals and compounds were from Sigma Aldrich. TopSeal-A PLUS, Dihydroalprenolol Hydrochloride ([3H]-DHA, 250µCi, 9.25MBq), WGA PVT 500 MG SPA Beads, and OptiPlate-96, and White Opaque 96-well Microplates were from Perkin Elmer.
Plasmids
The pSNAP-β2AR plasmid was obtained from Cisbio. HA-tagged β2AR in pcDNA3.1 was from www.cdna.org. Flag-β2AR-YFP and Flag-β2V2-YFP were provided by Cornelius Krasel (Department of Pharmacology and Toxicology, Philips-University Marburg, Germany)122. C-terminally NanoLuc-tagged human β2AR (β2AR-NanoLuc), N-terminally Venus-tagged MiniGαs and N-terminally Venus-tagged arr3 were kindly provided by Laura Kilpatrick, Nevin Lambert and Kevin Pfleger, respectively. Nb80-LgBiT corresponds to the β2AR active state-stabilizing G protein-mimicking llama-derived single-chain antibody fragment, Nanobody 80 (Nb80) (Q1-S121)96 N-terminally fused to LgBiT and separated by a 15-residue Ser/Gly linker. The SNAP-tagged β2 receptor harbouring the C-terminal tail of the vasopressin V2 receptor (denoted as β2V2) was generated by PCR using pSNAP-β2AR and V2R as templates; the C-tail of the β2AR was exchanged at position 342 (after Cys-341 of the β2AR) with the last 29 amino acids (Ala-343 to Ser-371) of the V2R. AC5-SmBiT was created by fusing the SmBiT fragment (VTGYRLFEEIL) to the N-terminus of the human full-length adenylyl cyclase isoform 5 (ADCY5) with a 15-amino-acid flexible linker (GGSGGGGSGGSSSGG). The resulting AC5-SmBiT fusion protein was inserted into the pCAGGS expression plasmid. The Gαs-LgBiT construct, was previously described123. The Halo-tagged arr3 mutants R170E and F388A were generated with the QuikChange site-directed mutagenesis method using arrestin-388 as a template. Human arrestin-3 N-terminally tagged with Renilla reniformis luciferase II (RLucII) in pcDNA3.1 was a kind gift of Jakob Lerche Hansen, University of Copenhagen. The Epac1-camps sensor was provided by Jesper Mosolff Mathiesen, University of Copenhagen. All other plasmids used in this study have been previously described: MiniGi- and MiniGs-LgBiT48, LgBiT-arr2, LgBiT-arr3, LgBiT-arr2R393E, R395E (=LgBiT-arr2EE), LgBiT-arr3R393E, R395E (=LgBiT-arr3EE)124, Gαs-LgBiT which contains the LgBiT fragment following amino acid position 99 in the human Gαs short-isoform123, and the plasmids coding for GRK2, GRK6, β2V2-NanoLuc and Halo-arr388.
Cell culture
wt HEK293 were obtained from ThermoFisher and chosen as the parental line for CRISPR/Cas9 genome editing. HEK293 lines lacking arrestin-2/-3 (a.k.a. β-arrestin-1/2, Îarr2/3 cells) or the six Gα subunits Gαs/olf/q/11/12/13 (denoted as Îsix) were generated and characterized as previously described in detail50,125. Parental wt HEK293 and CRISPR/Cas9 genome-edited HEK293 cells were cultured in DMEM supplemented with 10% foetal bovine serum (FBS, PAN biotech), 100âUâper ml penicillin and 100âmg perâml streptomycin at 37â°C in a humidified atmosphere of 95% air and 5% CO2.
Stable SNAP-β2AR expressing HEK293 cell lines were generated in cooperation with the group of Prof. Dr. Hanns Häberlein (Department of Biochemistry, Bonn University, Germany), as previously reported126. The SNAP-β2V2 cell line was generated by transfecting wt HEK293 cells with SNAP-β2V2 using PEI, at a DNA:PEI ratio of 1:3 (5000âng DNA, 2.5âÃâ106 cells). 48âh post-transfection, cells were detached and seeded into a 96-well plate at a density of 1 cell per well in culture media supplemented with 0.5âmg per ml G418. The medium was changed every 48âh. Cells that grew to confluency were detached and expanded stepwise into a 75âcm2 flask. Only clones producing high levels of receptor expression (analyzed with anti-SNAP-tag antibody, dilution 1:1000) were selected. All stable cell lines were cultivated using a medium containing 0.5âmg perâml G418.
Generation and culture of CRISPR/Cas 9-genome-edited GRK2/3/5/6 quadruple knockout HEK293 cells (a.k.a. ÎQ-GRK HEK293) has been previously detailed88.
HEK293 wt cells were stably transfected with a plasmid coding for an N-terminally triple-HA-tagged β2AR (AR0B20TN00, www.cDNA.org) using TurboFect (Thermo Fisher Scientific) and single-cell clones were expanded by limiting dilution using 400âµg/ml G418 sulfate.
Chinese hamster ovary K1 (CHO-K1) cells were obtained from ATCC and cultured in phenol red-free DMEM/F12, supplemented with 10% FBS, penicillin and streptomycin at 37â°C in a humidified atmosphere of 95% air and 5% CO2.
All cell lines were checked for and used free of mycoplasma contamination. For Gαi/o inhibition analyses, cells were incubated with 100âng perâml PTX for at least 16âh.
Membrane preparation
HEK293 cells, stably expressing SNAP-β2AR were grown to confluency in T175 culture flasks, washed once with ice-cold phosphate-buffered saline (PBS) and scraped off the bottom of the flask in ice-cold PBS. After centrifugation at 12,000âÃâg for 7.5âmin at 4â°C, the cell pellet was re-suspended in ice-cold HME buffer (20âmM HEPES pH 7.4, 2âmM MgCl2, 1âmM EDTA) and subjected to one freeze/thaw cycle with liquid nitrogen. The thawed samples were then further homogenized by sonication using a Branson Sonifier Cell Disruptor B15 (output controlâ=â3, duty cycleâ=â30%, pulsed mode) with 10âÃâ5 pulses, and membranes were sedimented by centrifugation for 30âmin at 12,000âÃâg at 4â°C. The supernatant was discarded, and cell pellets were re-suspended in ice-cold HME buffer. Membrane emulsions were further homogenized by passing the emulsion several times through a syringe with a diameter of approximately 0.6âµm. The total protein concentration of the membrane preparations was determined with a Pierce BCA Protein Assay Kit (Thermo Fisher) according to the manufacturerâs protocol. Membrane samples were aliquoted, snap-frozen in liquid nitrogen and stored at â80â°C.
Saturation binding assay
Binding reactions with increasing concentrations of [3H]-DHA, ranging from 0.01 pM to 10âµM, were carried out in a final volume of 200âµl binding buffer (HBSS supplemented with 20âmM HEPES pH 7.4) containing 5âµg membrane proteins and 500âµg wheat germ agglutinin (WGA)-coated polyvinyltoluene (PVT) scintillation proximity assay (SPA) beads (PerkinElmer). The binding reaction was carried out for 120âmin at room temperature under gentle agitation and terminated by centrifugation at 4500âÃâg at room temperature for 10âmin. Non-specific binding of [3H]-DHA was measured in the presence of 1âµM ICI. Radioactivity was quantified using single-photon counting on a TopCount NXT microplate scintillation and luminescence counter (Packard). Data were fitted to the equations of linear regression (one site, total and non-specific binding, respectively) using GraphPad Prism software. To obtain specific binding curves, non-specific binding of [3H]-DHA was subtracted from the total binding signal.
Competition binding assay
Equilibrium binding was carried out in a binding buffer at a final volume of 200âμL containing 5âμg of membrane proteins, 500âμg of WGA-coated PVT SPA beads, 1ânM [3H]-DHA, and ISO or carvedilol at the indicated concentrations. Non-specific binding of 1ânM [3H]-DHA was measured in the presence of 1âμM ICI. The binding reaction was carried out for 120âmin at room temperature under gentle agitation and terminated by 10âmin centrifugation at 453âÃâg at room temperature for 10âmin. Radioactivity was quantified using single-photon counting on a TopCount NXT microplate scintillation and luminescence counter.
To obtain the competition binding curves of ISO and carvedilol, the non-specific binding was subtracted from the total binding to obtain specific binding values. Binding curves were normalized to the maximal response of specific binding. To calculate the Ki values, the data were fitted using nonlinear regression using GraphPad Prism. pKi was defined as âlogKi.
HTRF ERK1/2 phosphorylation assay
Compound-induced changes in phosphorylated ERK1/2 were quantified using the HTRF technology (Cisbio) following the two-plate protocol for adherent cells according to the manufacturerâs instructions. Briefly, HEK293 cells stably expressing SNAP-β2AR were seeded into poly-D-lysine (PDL)-coated 96-well plates at a density of 75,000 cells per well and allowed to attach overnight. Where indicated, 100âng per ml PTX was added to the medium. The next day, the medium was changed to starvation medium (culture medium without FCS), and after 4âh at 37â°C compounds were added for the indicated time points. Cells were subsequently lysed by exchanging the medium with lysis buffer and incubating for 30âmin on an orbital shaker. Then, the plates were sealed and frozen at â20â°C. The following day, lysates were thawed, transferred into a white 384-well plate and incubated with the antibody mixtures supplied by the manufacturer for detection of either phosphorylated pERK1/2 or total tERK1/2. The microtiter plate was kept in the dark for at least 2âh prior to reading out with a Mithras2 equipped with emission filters at 665 and 620ânm (Berthold Technologies). pERK time courses were analyzed using GraphPad Prism, and data are presented as fold increase over basal, relative to the respective buffer values for each individual time point.
Label-free dynamic mass redistribution (DMR) assay
DMR was recorded as previously described in detail127. Briefly, cells were seeded into fibronectin-coated 384-well Epic biosensor plates (Corning) at a density of 18,000 cells/well and cultivated overnight. The next day, cells were washed twice using HBSS supplemented with 20âmM HEPES and allowed to equilibrate for 60âmin at the Epic reader (Corning). After equilibration, measurement was initiated, recording 5âmin of baseline read before the addition of compounds using the semi-automated handling system Cybio-Selma (Analytik Jena). Cell DMR triggered by the compounds was recorded for at least 60âmin at 37â°C. Where indicated, antagonists were added during equilibration. Raw data were processed using the microplate analyzer (Corning) and analyzed using GraphPad Prism. DMR real-time traces are presented as integrated pm shifts over time following ligand exposure.
HTRF cAMP accumulation assay
cAMP accumulation was measured using the HTRF technology (Cisbio) and a suspension cell-based protocol. In brief, cells were detached, re-suspended in stimulation buffer (HBSS supplemented with 20âmM HEPES and 1âmM IBMX) and seeded into a white 384-well microtiter plate. To keep the HTRF ratios within the assay dynamic range, the cell number was adjusted to accommodate the efficacy of the different agonists (for Isoproterenol, 500 cells per well; for Carvedilol, 7500 cells per well). The cells were allowed to equilibrate in the plate for 20âmin at 37â°C before compound addition. After 30âmin incubation at 37â°C, the assay was terminated by the sequential addition of d2-labelled cAMP and cryptate-labelled anti-cAMP antibody, then leaving the plate in the dark for at least 1âh. HTRF ratios were measured using Mithras2 (Berthold Technologies) at 665 and 620ânm. Subsequently, HTFR ratios were adjusted at 500 cells to match the conditions of both agonists and converted to cAMP concentrations using a cAMP standard curve previously assessed according to the manufacturerâs protocol.
Real-time cAMP detection
Ligand-mediated dynamic changes of intracellular cAMP levels were monitored using the Epac1-based fluorescence resonance energy transfer (FRET) cAMP biosensor as previously described128. SNAP-β2AR stable cell lines were transiently transfected with the EPAC1-camps sensor using Lipofectamine 2000 according to the manufacturerâs protocol. Twenty-four hours after transfection, the cells were transferred into a poly-L-lysine-coated black 96-well microplate at a density of 50k cells per well and cultured overnight. Cells were incubated at room temperature in 80âµl HBSS (supplemented with 20âmM HEPES, pH 7.4) in the PHERAstar FSX multimode plate reader (BMG Labtech) for 10âmin before stimulation with compounds. The plate was read, measuring the fluorescence of mCerulean (480ânm) and mCitrine (530ânm) upon mCerulean excitation (430ânm) with a dual emission fluorescence optical module (FI 430 530 480). Variations in intracellular cAMP abundance were followed as changes in the mCerulean/mCitrine FRET ratio. FRET ratios were plotted against time during the 60âmin post-stimulation for each compound concentration. EC50 values were determined in GraphPad Prism from the area under the curve (AUC) values of the different concentration-response curves plotted against ligand concentrations. pEC50 vales were defined as âlogEC50.
Laboratory animals and ethical statement
Neonatal mice (CD1 background) and 8â10-weeks-old pmEpac1-camps transgenic mice65 were used. All animal experiments were performed according to institutional and governmental guidelines and approved by the national state authority BGV Hamburg (approval No. ORG_1010). Special approval for harvesting neonatal cardiomyocytes was not required. Housing conditions: mice were kept in 12/12âh dark/light cycles with food and water ad libido at room temperature (20â24â°C) and standard humidity (45â60%).
cAMP dynamics assay in adult murine ventricular myocytes
Adult ventricular cardiomyocytes were isolated from pmEpac1-camps transgenic mice65 via retrograde perfusion and enzymatic digestion of the hearts in a Langendorff set-up and seeded on laminin-coated round glass cover slides for live imaging on the same day as previously described129. Thus, the cover slides with attached ventricular cardiomyocytes were treated with FRET buffer (144âmM NaCl, 5.4âmM KCl, 1âmM MgCl2, 1âmM CaCl2, 10âmM HEPES, pH 7.3) in an Attofluor microscopy chamber on a custom-made Nikon Eclipse Ti microscopy system (Nikon Düsseldorf, Germany) equipped with a Ã63/1.40 oil-immersion objective130. Upon compound addition, the system recorded cAMP signals generated by the donor fluorophore CFP (excitation at 440ânm) every 5âs using a CoolLED single-wavelength light-emitting diode. Emitted light was detected by an ORCA-03G charge-coupled device camera (Hamamatsu, Herrsching am Ammersee, Germany) after having been split into CFP and YFP channels using a DV2 DualView (Photometrics, Surrey, BC, Canada)130. Data analysis was performed using ImageJ/Fiji and GraphPad Prism softwares.
CardioExcyte96-impedance measurements
Neonatal mouse ventricular cardiomyocytes were dissociated from 1â3-day-old CD1 mouse hearts using the Neonatal Heart Dissociation Kit (Miltenyi Biotec) according to the manufacturerâs instructions. Cells were seeded on fibronectin-coated CardioExcyte 96-well sensor plates (Nanion Technologies) in Iscoveâs Modified Dulbeccoâs Medium (IMDM) containing 20% FCS, 1% non-essential amino acids, 1% penicillin/streptomycin and 0.1% β-mercaptoethanol, at a density of 50,000 cells per well. One day later, the medium was exchanged with IMDM containing 2% FCS to prevent fibroblast overgrowth. After 5â7 days, beating frequencies were measured by recording impedance signals with the CardioExcyte96 system (Nanion Technologies) for 30âs every 2â5âmin. After 10âmin of equilibration in 200âµl IMDM and baseline recording either without blockers or in the presence of ICI (10âµM) and/or CGP (10âµM) cells were stimulated by adding 20âµl pre-heated IMDM containing ISO (final concentration: 300ânM) or carvedilol (final concentration: 300ânM). Baseline frequency and effect of ISO was averaged for 10âmin using the CardioExcyte96 control software (Nanion); the effect of carvedilol was shorter lasting and thus averaged over 6âmin. Statistical analysis of ISO or carvedilol effects was performed with Studentâs t-test and comparison of relative frequency increases in the presence/absence of blockers was performed with one-way ANOVA repeated measurements and Tukey post-test using GraphPad Prism software (Version 8.43).
Fluorescence microscopy
SNAP-β2AR expressing HEK293 cell lines were seeded into PDL-coated eight-well plates (Ibidi) at a density of 120,000 cells per well. When necessary, cells were transfected 24âh earlier with GRK2, arrestin-3 or a combination of both (5000âng DNA, 2.5âÃâ106 cells) using PEI at a DNA:PEI ratio of 1:3 as previously reported131. The next day after seeding, the medium was exchanged to a solution of SNAP-Surface Alexa Flour 649 in serum-free DMEM and incubated for 30âmin at 37â°C and 5% CO2. Afterwards, the plates were washed three times with HBSS, and 150âµl HBSS was added to each well. Images were then acquired on a Zeiss AxioObserver Z (Carl Zeiss, Jena, Germany), equipped with ApoTome2.0 using Ã63 magnification. Focal height was maintained by utilizing Definite Focus (Carl Zeiss, Jena, Germany). After acquiring a baseline image, cells were stimulated by adding 150âµl of a 2à agonist solution in HBSS. After the indicated times, a new image was acquired. Image processing and line scan analysis were performed using Zen blue Imaging software (Carl Zeiss, Jena, Germany).
Diffusion-enhanced resonance energy transfer (DERET)
Analysis of agonist-induced disappearance of SNAP-β2ARs from the cell surface was performed by DERET as described earlier79,80,81. Briefly, HEK293 cells stably expressing SNAP-β2ARs were detached and seeded into PDL-treated white 96-well plates at a density of 100,000 cells per well and incubated at 37â°C under humidified conditions with 5% CO2 one day prior to the assay. For overexpression experiments, cells were transiently transfected 24âh earlier, as described above. On the day of the assay, the medium was exchanged to 100ânM SNAP-Lumi4-Tb labelling reagent (Cisbio) in assay buffer (HBSS supplemented with 20âmM HEPES) and incubated for 1âh at 37â°C. Excess SNAP-Lumi4-TB labelling medium was subsequently removed, and the cells were washed four times with assay buffer, followed by the addition of 20âµM fluorescein in the assay buffer. Cells were stimulated by the addition of an equivalent volume of ligands diluted in assay buffer. Fluorescence of Lumi4-Tb (donor, 620ânm) and fluorescein (acceptor, 520ânm) was measured simultaneously using the PHERAstar FSX multimode plate reader after excitation at 337ânm and recorded for at least 30âmin. During the assay, the heating chamber and all solutions used were pre-heated to 37â°C to minimize temperature fluctuations. Receptor internalization was assessed by calculating the donor/acceptor ratio using MARS data analysis software (BMG labtech), and the data were fitted to a one-phase exponential association/decay model using GraphPad Prism.
Clathrin-coated pits (CCP) trapping analysis
CCP trapping of SNAP-β2AR was recorded as previously described55. Briefly, CHO-K1 cells were seeded onto ultraclean 25âmm round glass coverslips at a density of 3âÃâ105 cells per well. On the following day, cells were transfected using Lipofectamine 2000 with SNAP-β2AR and N-terminally GFP-tagged clathrin light chain (GFP-CCP) (kindly provided by Emanuele Cocucci and Tom Kirchhausen), following the manufacturerâs protocol. Cells were labelled with 1âμM SNAP-Surface Alexa Flour 549 in complete culture medium for 20âmin at 37â°C and used 4âh after transfection to obtain low physiological protein expression levels. Cells were washed with a complete culture medium and imaged in HBSS supplemented with 10âmM HEPES after incubation with compounds. Single-molecule microscopy experiments were performed using total internal reflection fluorescence (TIRF) microscopy as previously described132. The sample and objective were maintained at 37â°C throughout the experiments. Multicolour single-molecule image sequences were acquired simultaneously at the full frame in frame transfer mode, corresponding to one image every 30âms. Automated single-particle detection and tracking were performed with the u-track software133, and the obtained trajectories were further analyzed using custom algorithms in MATLAB environment as previously described134. CCP detection was performed by applying a frame-by-frame binary mask to GFP-CCP image sequences. Sub-trajectory analysis of trapped and free portions was performed using the method based on recurrence matrix132.
NanoBiT
The NanoBiT-based enzyme complementation assay was carried out according to previously published protocols135,136. Cell cultures (2.5âÃâ106 cells) were transiently transfected 24âh before the experiment with the respective components (5000âng total DNA amount) using PEI. When necessary, the DNA mixture was supplemented with empty vector to achieve the final amount of DNA.
Mini-Gs recruitment was detected after transfection of 400âng β2AR-SmBiT and 40âng mini-Gs-LgBiT.
For complementation assays between Gαs-LgBiT and AC5-SmBiT, 500âng Gαs-LgBiT and 500âng AC5-SmBiT were co-transfected with 500âng Gβ1, 500âng Gγ2 and 100âng Ric8B.
Arrestin recruitment to β2AR was measured after transfecting 600âng of β2AR-SmBiT and 300âng of either arr2-, arr3-, arr2EE- or arr3EE-LgBiT.
Nb80 recruitment was carried out after transfection with 400âng β2AR-smBiT and 40âng Nb80-lgBiT.
On the day of the experiment, cells were harvested, re-suspended in assay buffer (HBSS supplemented with 20âmM HEPES and 0.01% BSA or OptiMEM for mini-Gs and Nb80 recruitment) and seeded in a 96-well plate (80,000 cells per well). Coelenterazine (Carbosynth) was added to the cells and incubated in the dark for 2âh at room temperature. For Gαs:AC5 interactions and for mini-Gs and Nb80 recruitment, cells were instead incubated with NanoGlo LiveCell substrate diluted 200-fold in assay buffer for 15âmin at 37â°C. Compound addition was performed after measuring six time points of baseline read, and the signal was followed for at least 15âmin using PHERAstar FSX (BMG Labtech) or Mithras LB940 (Berthold Technologies) readers. Protein-protein interaction (PPI) was calculated as a fold increase of luminescence over baseline and fitted to a one-phase exponential association model using GraphPad Prism.
Bioluminescence resonance energy transfer (BRET)
For recruitment examination of mini Gαs or arr3 to β2AR, wt HEK293 cells were seeded onto a six-well plate at a density of 7âÃâ105 cells per well. On the following day, cells were transfected using Lipofectamine 2000 with β2AR-NanoLuc alongside N-terminally Venus-tagged MiniGαs or N-terminally Venus-tagged arr3, following the manufacturerâs protocol. Twenty-four hours post-transfection, cells were detached and re-suspended in FluoroBrite phenol red-free complete media containing 5% FBS and 2âmM of L-glutamine. Cells were seeded onto a PDL-coated 96-well white LumiNunc microplates plate at a density of 1âÃâ105 cells per well. Cells were left overnight to attach. Forty-eight hours post-transfection, cell media was replaced with HBSS supplemented with 10âmM HEPES and Nano-Glo in 1:500 dilution. Basal BRET measurements were recorded over an 8âmin period using the PHERAstar microplate reader with BMG BRET1 filters: Donor wavelength: 475â30ânm and acceptor wavelength: 535â30ânm at 37â°C. Cells were then stimulated with 10âμM carvedilol, isoproterenol or vehicle (HBSS). The resulting ratiometric BRET signal between the interacting fluorophore and lumiphore was normalized by subtracting the background ratio (535â30ânm emission over 475â30ânm) of the vehicle-treated wells with the matched isoproterenol-treated wells producing a signal defined as the âligand-induced BRET ratioâ.
For recruitment analysis of arr3 to β2V2, wt HEK293 cells (2.5âÃâ106 cells) were transiently transfected 24âh before the experiment with 500âng RLuc-arr3 and 500âng Flag-β2V2-YFP (5000âng total DNA amount) using PEI. The next day, cells were detached and seeded at a density of 100,000 cells per well in white 96-well plates. Coelenterazine was added at a ratio of 1:5000 and incubated for 15âmin before compound addition. RLuc and YFP emissions were measured simultaneously on the PHERAstar FSX multimode plate reader and recorded for at least 30âmin. PPI was assessed by calculating the acceptor/donor ratio using MARS data analysis software (BMG labtech), and the data were plotted using GraphPad Prism.
Recruitment evaluation of Halo-arr3 to β2V2-NanoLuc was carried out in transiently transfected wt HEK293 cells, whereas recruitment of Halo-arrestin-3-R170E or Halo-arrestin-3-F388A to β2AR-NanoLuc was performed in the CRISPR/Cas 9-derived GRK2/3/5/6 quadruple knockout HEK293 cell line, a.k.a. ÎQ-GRK HEK29388 and in HEK293 wt cells transfected with empty lentiCRISPR v2 plasmid used herein as CRISPR control line. In 21âcm2 dishes, 1.6âÃâ106 GRK2/3/5/6 KO cells or 1.2âÃâ106 wt cells were seeded and transfected the next day with 500âng of either β2AR-NanoLuc or β2V2-NanoLuc, 1000âng of Halo-arrestin-3 constructs, or empty vector to adjust the total transfected DNA to 2,5âmg using Effectene (Quiagen) according to the manufacturerâs instructions. After 24âh, 40,000 cells per well were seeded into PDL-coated 96-well plates in the presence of HaloTag® 618 ligand at a ratio of 1:2000. For each transfection, a mock labelling condition lacking the Halo-ligand was seeded. The next day, the cells were washed twice with measuring buffer (140âmM NaCl, 10âmM HEPES, 5.4âmM KCl, 2âmM CaCl2, 1âmM MgCl2; pH 7.3). Subsequently, a measuring buffer containing the NanoLuc-substrate furimazine in a ratio of 1:35,000 was added. A Synergy Neo2 plate reader (Biotek) with a custom-made filter (excitation bandwidth 541â550ânm, emission 560â595ânm, fluorescence filter 620/15ânm) was used to measure BRET. The baseline was measured for 3âmin, and after the addition of the indicated ligands, the measurements were continued for 5âmin. PPI was evaluated as previously reported88, and the data were plotted using GraphPad Prism.
β2AR phosphorylation assay
HEK293 wt cells stably expressing HA-tagged β2AR were transiently transfected with vector, GRK2 or GRK6, seeded onto poly-l-lysine-coated 60âmm dishes and grown to 80% confluence. On the day of the assay, cells were treated with compounds for 10âmin and then lysed in detergent buffer [50âmM tris-HCl (pH 7.4), 150âmM NaCl, 5âmM EDTA, 10âmM NaF, 10âmM disodium pyrophosphate, 1% (v/v) Nonidet P-40, 0.5% (w/v) sodium deoxycholate and 0.1% (w/v) SDS in the presence of protease and phosphatase inhibitors (Complete mini and PhosSTOP, Roche Diagnostics). HA-beads (Thermo Scientific) were added to the lysates and gently incubated at 4â°C on a turning wheel for 2âh. Proteins were eluted from the beads using SDS sample buffer (125âmM Tris pH 6.8, 4% SDS, 10% glycerol, 167âmM DTT) for 30âmin at 50â°C. Samples were separated by 7% SDS-polyacrylamide gel electrophoresis, transferred to nitrocellulose by electroblotting, and β2AR phosphorylation was detected using the phospho-specific antibodies pSer261-β2AR (dilution 1:200), pS355/pS356-β2AR and pT360/pS364-β2AR (dilution 1:200). Total amount of β2AR was detected with the anti-HA-antibody (dilution 1:1000).
Metadynamics simulations
Active (PDB ID: 3SN6) and inactive (PDB ID: 2RH1) states of β2AR 3D structures were obtained from the GPCRdb137. All intracellular proteins were removed, and three different systems were prepared for both active and inactive states, namely apo, carvedilol- and ISO-bound. The ligands were manually docked with MOE2019 (Molecular Operating Environment, Chemical Computing Group) and checked for congruence of binding mode with the corresponding β1AR and β2AR structures. The structures were then embedded in a homogenous POPC membrane and solvated with TIP3P model water molecules and 0.15ânM NaCl, using CHARMM-GUI138 with CHARMM force fields. Three replicates of each system (active/inactive à apo/ carvedilol-/ISO-bound) were then equilibrated in NAMD2139 in six steps. Fewer restraints were applied at each step, as provided by CHARMM-GUI. Afterwards, 100âns of unbiased molecular dynamics (MD) simulations were performed with ACEMD140, with a time step of 4âfs, to further equilibrate each system. Hydrogen mass was repartitioned to 4.0 au and constrained during simulations to enable a time step of 4âfs140,141. This was followed by well-tempered multiple walker metadynamics simulations performed in ACEMD, with the PLUMED plugin and using the A100 activation index98 as a collective variable. A Gaussian potential was deposited every 1âps with a starting height of 1âkJ/mol, a sigma of 1 A100 units, and a bias factor of 10 along a grid of â300 to 300 A100 units, at a spacing of 0.2 A100 units. Multiple walkers consisting of six walkers (3 active and 3 inactive) were used for each ligand-bound state, reading each Gaussian file every 0.4âps of simulation. Each replicate was run for 1âms, and the free energy surfaces (FES) were visually inspected at 50ânsâÃâ6 walker intervals (total simulation time of 300âns per interval, Fig. 6b). The simulations were extended up to 1.5âms per walker in case we observed visually substantial differences between the intervals, such as changes in shape or difference between minima of the FES. The FES were then constructed from the Gaussian files using PLUMED. Frames from each minimum (±5 A100 units) were extracted and ICL2 backbone atoms were clustered using CPPTRAJ142. Representative structures from the minima of each system and JSON files for generating flare plots of hydrogen bonds (occurring in >50% of frames in a minimum) and van der Waals interactions (>80% of frames in a minimum) can be found in the Supplementary Methods for metadynamics simulations and at https://doi.org/10.5281/zenodo.7050831.
Data and statistical analysis
All data collection has been performed on commercially available software as provided by the manufacturer of the respective device. In particular, MicoWin 2000 (Berthold Technologies GmbH & Co KG, Version: 5.22), Epic Autoalign/Imager Lab View 2009 (Perkin Elmer, Version: 9.0.1f2), PHERAstar FSX reader control (BMG Labtech, Version: 5.41), Zeiss Zen blue edition (Carl Zeiss GmbH, Version: 3.3.89.00000)
Data analysis has been performed on commercially available software. In particular, MARS (BMG Labtech, 3.32), Zeiss Zen blue edition (Carl Zeiss GmbH, Version: 3.3.89.00000). Data and statistical analyses were performed using GraphPad Prism version: 9.1.2, whereas for CardioExcyte96-impedance measurements GraphPad Prism version 8.43 was used. cAMP dynamics assay in adult murine ventricular myocytes was processed in ImageJ/Fiji (https://imagej.net/Fiji).
Concentration-response curves were fitted to a four-parameter equation: Yâ=âBottomâ+â(Top-Bottom)/(1â+â10^((LogEC50-X)*HillSlope)), where Y is the response, Top and Bottom represent the plateaus of the concentration-response curve in the same units as Y, X is the molar concentration of agonist depicted in log units, EC50 is the molar concentration of agonist in log units required to elicit a half-maximal response, and the HillSlope represents a unitless factor. The best-fit value for the HillSlope was challenged with a HillSlope of unity (1) to select the simpler model based on a P-value of 0.05 using an extra sum-of-squares F-test.
Summarized data are presented as the meanâ±âSEM of 2â4 technical replicates and at least three biological replicates, with the number of independent experiments stated in the figure legend. The data were analyzed by analysis of variance (ANOVA) tests or two-tailed Studentâs t-test. See figure legends and text for specific statistical analyses used.
Reporting summary
Further information on research design is available in the Nature Portfolio Reporting Summary linked to this article.
Data availability
The data that support this study are available from the corresponding author upon request. β2AR 3D structures data used in this study were obtained from the G protein-coupled receptor database (https://gpcrdb.org/structure/3SN6 and https://gpcrdb.org/structure/2RH1). Metadynamics simulations data have been deposited in the open repository Zenodo (https://doi.org/10.5281/zenodo.7050831). All data generated and analyzed during this study are included in this published article and the Supplementary Information. Source data are provided with this paper.
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Acknowledgements
We thank Ulrike Rick and Kimberly Harisch for excellent assistance. This study was supported by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) 290847012/FOR2372 to E.K. and Heisenberg professorships KO4095/4-1 and KO4095/5-1 to P.K. T.B. was a member of the DFG-funded Research Training Group RTG1873 (214362475/GRK1873/2). A.C. and M.S. were supported by the Luxembourg National Research Fund (INTER/FWO âNanokineâ grant 15/10358798, INTER/FNRS grants 20/15084569, and PoC âMegakineâ 19/14209621), F.R.S-FNRS-Télévie (7.8504.20). D.C. was supported by a Wellcome Trust Senior Research Fellowship (212313/Z/18/Z). This article is based upon work from COST Action ERNEST (CA18133), supported by COST (European Cooperation in Science and Technology, www.cost.eu).
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E.K. and J.G. take responsibility for the data integrity and accuracy of data analysis. E.K. and T.B. conceived and designed the study. T.B., M.Z., J.Z., S.B., N.M., E.S.F.M., J.D., E.M.T., D.M., M.S., Ja.Gr., Z.K., Y.L., S.OâB., N.P. and N.D. performed experiments and analyzed the data. V.J.Y.L. and S.M. performed molecular dynamic simulations/modelling and assembled the data. A.I., V.N., D.C., A.C., P.S., S.S., C.H., P.K., M.W., K.S., J.G. and E.K. coordinated, supervised and oversaw the study. T.B. drafted the initial version of the manuscript with support from J.G.; E.K. wrote the manuscript with input from all authors.
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S.S. is the founder and scientific advisor of 7TM Antibodies GmbH, Jena, Germany. The remaining authors declare no competing interests.
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Benkel, T., Zimmermann, M., Zeiner, J. et al. How Carvedilol activates β2-adrenoceptors. Nat Commun 13, 7109 (2022). https://doi.org/10.1038/s41467-022-34765-w
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DOI: https://doi.org/10.1038/s41467-022-34765-w
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