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Genome design with the semantic web

Published: 07 December 2011 Publication History

Abstract

Advances in DNA synthesis technology have enabled the design of novel genomes. Semantic web will improve the capability of genome design tools for integrating experimental data to guide the DNA design process. Here we review software tools, suggest guidelines for genome design software, and present GenoCODE: a program for designing genomes using the semantic web SciNetS.

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SWAT4LS '11: Proceedings of the 4th International Workshop on Semantic Web Applications and Tools for the Life Sciences
December 2011
139 pages
ISBN:9781450310765
DOI:10.1145/2166896
Permission to make digital or hard copies of part or all of this work for personal or classroom use is granted without fee provided that copies are not made or distributed for profit or commercial advantage and that copies bear this notice and the full citation on the first page. Copyrights for third-party components of this work must be honored. For all other uses, contact the Owner/Author.

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  • Ontotext
  • Corporate Semantic Web: Corporate Semantic Web
  • BBRC: Biotechnology and Biological Sciences Research Council
  • NCBO: National Center for BioMedical Ontology
  • BioMed Central: BioMed Central

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Association for Computing Machinery

New York, NY, United States

Publication History

Published: 07 December 2011

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  1. GenoCODE
  2. SciNetS
  3. genome design
  4. synthetic biology

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SWAT4LS '11
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  • BBRC
  • NCBO
  • BioMed Central

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