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Diagnosis prediction based on similarity of patients physiological parameters

Published: 19 January 2022 Publication History

Abstract

Medical staff can be considerably supported in patient healthcare delivery thanks to the adoption of machine learning and deep learning methods by enhancing clinicians decisions and analysis with targeted clinical knowledge, patient information, and other health data. This paper proposes a learning methodology that, on the basis of the current patient health status, clinical history, diagnostic and laboratory results, provides insights for clinicians in the diagnosis and therapy decision processes. The approach relies on the concept that patients with similar vital signs patterns are, in all probability, affected by the same or very similar health problems. Thus, they can have the same or very similar diagnoses. Patients physiological signals are modeled as time series and the similarity among them is exploited. The method is formulated as a classification problem in which an ad-hoc multi-label k-nearest neighbor approach is combined with similarity concepts based on word embedding. Experimental results on real-world clinical data have shown that the proposed approach allows detecting diagnoses with a precision up to about 75%.

References

[1]
Jolita Bernataviciene, Gintautas Dzemyda, Gediminas Bazilevicius, Viktor Medvedev, Virginijus Marcinkevicius, and Povilas Treigys. Method for visual detection of similarities in medical streaming data. International Journal of Computers Communications & Control, 10(1):8--21, 2014.
[2]
Piotr Bojanowski, Edouard Grave, Armand Joulin, and Tomas Mikolov. Enriching word vectors with subword information. Transactions of the Association for Computational Linguistics, 5:135--146, 2017.
[3]
Carmelo Cassisi, Placido Montalto, Marco Aliotta, Andrea Cannata, and Alfredo Pulvirenti. Similarity measures and dimensionality reduction techniques for time series data mining. Advances in data mining knowledge discovery and applications'(InTech, Rijeka, Croatia, 2012, pages 71--96, 2012.
[4]
Edward Choi, Mohammad Taha Bahadori, Andy Schuetz, Walter F. Stewart, and Jimeng Sun. Doctor ai: Predicting clinical events via recurrent neural networks. In Finale Doshi-Velez, Jim Fackler, David Kale, Byron Wallace, and Jenna Wiens, editors, Proceedings of the 1st Machine Learning for Healthcare Conference, volume 56 of Proceedings of Machine Learning Research, pages 301--318, Northeastern University, Boston, MA, USA, 18--19 Aug 2016. PMLR.
[5]
D. Coomans and D.L. Massart. Alternative k-nearest neighbour rules in supervised pattern recognition: Part 1. k-nearest neighbour classification by using alternative voting rules. Analytica Chimica Acta, 136:15--27, 1982.
[6]
Chunxiao Fu, Pengle Zhang, Jiang Jiang, Kewei Yang, and Zhihan Lv. A bayesian approach for sleep and wake classification based on dynamic time warping method. Multimedia Tools and Applications, 76(17):17765--17784, 2017.
[7]
Hrayr Harutyunyan, Hrant Khachatrian, David C Kale, Greg Ver Steeg, and Aram Galstyan. Multitask learning and benchmarking with clinical time series data. Scientific data, 6(1):1--18, 2019.
[8]
Mark Hoogendoorn, Ali El Hassouni, Kwongyen Mok, Marzyeh Ghassemi, and Peter Szolovits. Prediction using patient comparison vs. modeling: A case study for mortality prediction. In 2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), pages 2464--2467. IEEE, 2016.
[9]
Peter B Jensen, Lars J Jensen, and Søren Brunak. Mining electronic health records: towards better research applications and clinical care. Nature Reviews Genetics, 13(6):395--405, 2012.
[10]
Alistair EW Johnson, Tom J Pollard, Lu Shen, H Lehman Li-Wei, Mengling Feng, Mohammad Ghassemi, Benjamin Moody, Peter Szolovits, Leo Anthony Celi, and Roger G Mark. Mimic-iii, a freely accessible critical care database. Scientific data, 3(1):1--9, 2016.
[11]
A Kianimajd, MG Ruano, P Carvalho, J Henriques, T Rocha, S Paredes, and AE Ruano. Comparison of different methods of measuring similarity in physiologic time series. IFAC-PapersOnLine, 50(1):11005--11010, 2017.
[12]
AC Linke, LE Mash, CH Fong, MK Kinnear, JS Kohli, M Wilkinson, R Tung, RJ Jao Keehn, RA Carper, I Fishman, et al. Dynamic time warping outperforms pearson correlation in detecting atypical functional connectivity in autism spectrum disorders. NeuroImage, 223:117383, 2020.
[13]
Daniel Lopez-Martinez, Patrick Eschenfeldt, Sassan Ostvar, Myles Ingram, Chin Hur, and Rosalind Picard. Deep reinforcement learning for optimal critical care pain management with morphine using dueling double-deep q networks. In 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), pages 3960--3963. IEEE, 2019.
[14]
Tomas Mikolov, Kai Chen, G.s Corrado, and Jeffrey Dean. Efficient estimation of word representations in vector space. Proceedings of Workshop at ICLR, 2013, 01 2013.
[15]
Matteo Pagliardini, Prakhar Gupta, and Martin Jaggi. Unsupervised learning of sentence embeddings using compositional n-gram features. In Proceedings of the 2018 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies, Volume 1 (Long Papers), pages 528--540, New Orleans, Louisiana, June 2018. Association for Computational Linguistics.
[16]
Sanjay Purushotham, Chuizheng Meng, Zhengping Che, and Yan Liu. Benchmarking deep learning models on large healthcare datasets. Journal of biomedical informatics, 83:112--134, 2018.
[17]
V. Tuzcu and S. Nas. Dynamic time warping as a novel tool in pattern recognition of ecg changes in heart rhythm disturbances. In 2005 IEEE International Conference on Systems, Man and Cybernetics, volume 1, pages 182--186 Vol. 1, 2005.
[18]
Yun-Chi Yeh. An analysis of ecg beats by using the mahalanobis distance method. In 2009 Fourth International Conference on Innovative Computing, Information and Control (ICICIC), pages 1460--1463, 2009.

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          cover image ACM Conferences
          ASONAM '21: Proceedings of the 2021 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining
          November 2021
          693 pages
          ISBN:9781450391283
          DOI:10.1145/3487351
          Permission to make digital or hard copies of all or part of this work for personal or classroom use is granted without fee provided that copies are not made or distributed for profit or commercial advantage and that copies bear this notice and the full citation on the first page. Copyrights for components of this work owned by others than ACM must be honored. Abstracting with credit is permitted. To copy otherwise, or republish, to post on servers or to redistribute to lists, requires prior specific permission and/or a fee. Request permissions from [email protected]

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          Published: 19 January 2022

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          Author Tags

          1. diagnosis prediction
          2. patients similarity
          3. time series analysis
          4. word embedding

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          Overall Acceptance Rate 116 of 549 submissions, 21%

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