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Draft:List of proteins in the human body: Difference between revisions

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<div class="covid19-container" id="head-table" aria-label="Table of Databases with human proteins" role="region" tabindex="0">
<div class="covid19-container" id="head-table" aria-label="Table of Databases with human proteins" role="region" tabindex="0"><templatestyles src="COVID-19 pandemic data/styles2.css" /> {{Static row numbers}}<div class="covid19-container" id="head-table" aria-label="Table of Databases with human proteins" role="region" tabindex="0">{{Expand section|date=January 2015}}<div class="scroll-container">
<div class="scroll-container">
{| class="wikitable sortable static-row-numbers mw-collapsible"
{| class="wikitable sortable static-row-numbers mw-collapsible"
!Name
!Database Short Name
!Database Name/link to website
!Link
!Provider
!Provider
!Datasources
!Sources of revenue/sponsors
!Sources of revenue/sponsors
!Intergrates:
!Number of unique proteins listed in the database
!Wiki article
!Intergrates which other databases?
!Desc.
!Size?
!Database type
|-
|-
|InterPro
|Wiki-pi<ref name = "Orii_2012">{{cite journal | vauthors = Orii N, Ganapathiraju MK | title = Wiki-pi: a web-server of annotated human protein-protein interactions to aid in discovery of protein function | journal = PloS One | volume = 7 | issue = 11 | pages = e49029 | year = 2012 | pmid = 23209562 | pmc = 3509123 | doi = 10.1371/journal.pone.0049029 | doi-access = free | bibcode = 2012PLoSO...749029O }}</ref>
|http://www.ebi.ac.uk/interpro/
|ELIXIR infrastructure
|[[European Bioinformatics Institute]]
|[[EMBL]], The Welcome trust, BBSRC
|CATH-Gene3D, CDD, HAMAP, MobiDB, PANTHER, Pfam, SMART, SUPERFAMILY, SFLD, TIGRFAMs,
|[[InterPro]]
|classifies proteins into families and predicts the presence of domains and sites
|
|[[Protein sequence]] databases
|-
|NextProt
|https://www.nextprot.org/
|CALIPHO (is a group at the SIB)
|[[Swiss Institute of Bioinformatics]]
|https://www.sib.swiss/about/funding-sources
|[[UniProt]], Cellosaurus, Gnomad, IntAct, SRAA Atlas, Uniprot - GOA, BGEE, COSMIC, MassIVE, Peptide atlas
|[[neXtProt]]
|a human protein-centric knowledge resource
|
|[[Protein sequence]] databases
|-
|Wiki-pi
|http://severus.dbmi.pitt.edu/wiki-pi/
|http://severus.dbmi.pitt.edu/wiki-pi/
|Madhavi K. Ganapathiraju
|Madhavi K. Ganapathiraju
|Unknown
|At present Wiki-Pi contains 48,419 unique interactions among 10,492 proteins. However it is not clear if this is unique proteins<ref name = "Orii_2012" />
|
|
|-
|Swiss Prot/Uni Prot
|https://www.sib.swiss/swiss-prot<nowiki/>,https://www.uniprot.org/
|SIB Swiss Institute of Bioinformatics, European Bioinformatics Institute (EMBL-EBI)
|Unknown
|Swiss-Prot has collected over 81 000 variants in roughly 13,000 human protein sequence records from peer-reviewed literature<ref>{{Cite web |last=Schedl |first=Tim |date=2014-06-25 |title=Faculty Opinions recommendation of Guidelines for investigating causality of sequence variants in human disease. |url=http://dx.doi.org/10.3410/f.718361327.793496556 |access-date=2023-07-19 |website=Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature}}</ref>. It is unclear how many unique proteins types are present in the database.
|
|
|
|
|
|At present Wiki-Pi contains 48,419 unique interactions among 10,492 proteins. However it is not clear if this is unique proteins[13]
|Protein interactoin Database
|-
|-
|Human Protein Reference Database
|Human Protein Reference Database
|
|[[Human Protein Reference Database]]
|
|[[Institute of Bioinformatics, Bangalore|Institute of Bioinformatics]] (IOB), [[Bangalore]], [[India]]
|[[Institute of Bioinformatics, Bangalore|Institute of Bioinformatics]] (IOB), [[Bangalore]], [[India]]
|
|Unknown
|
|One source claims 15000<ref name="pmid18988627">{{cite journal | vauthors = Keshava Prasad TS, Goel R, Kandasamy K, Keerthikumar S, Kumar S, Mathivanan S, Telikicherla D, Raju R, Shafreen B, Venugopal A, Balakrishnan L, Marimuthu A, Banerjee S, Somanathan DS, Sebastian A, Rani S, Ray S, Harrys Kishore CJ, Kanth S, Ahmed M, Kashyap MK, Mohmood R, Ramachandra YL, Krishna V, Rahiman BA, Mohan S, Ranganathan P, Ramabadran S, Chaerkady R, Pandey A | display-authors = 6 | title = Human Protein Reference Database--2009 update | journal = Nucleic Acids Research | volume = 37 | issue = Database issue | pages = D767-D772 | date = January 2009 | pmid = 18988627 | pmc = 2686490 | doi = 10.1093/nar/gkn892 }}</ref> proteins. But it is unclear how many of these are unique
|[[Human Protein Reference Database]]
|
|One source claims 15000 <ref>{{Cite web |title= |url=https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686490/}}</ref>proteins. But it is unclear how many of these are unique
|
|
|-
|
|
|
|[[Sanger Institute]]
|
|
|[[Pfam]]
|protein families database of alignments and HMMs
|
|[[Protein sequence]] databases
|-
|-
|Human Proteinpedia
|Human Proteinpedia
|
|[[Human Proteinpedia]]
|
|[[Institute of Bioinformatics, Bangalore|Institute of Bioinformatics]] (IOB), [[Bangalore]] and [[Johns Hopkins University]],
|[[Institute of Bioinformatics, Bangalore|Institute of Bioinformatics]] (IOB), [[Bangalore]] and [[Johns Hopkins University]],
|
|Unknown
|
|The human Proteinpedia is based on HPRD (Human protein reference database)which is a repository hosting over 30,000 human proteins.<ref name="pmid23504933">{{cite journal | vauthors = Muthusamy B, Thomas JK, Prasad TS, Pandey A | title = Access guide to human proteinpedia | journal = Current Protocols in Bioinformatics | volume = Chapter 1 | issue = | pages = 1.21.1-1.21.15 | date = March 2013 | pmid = 23504933 | pmc = 3664228 | doi = 10.1002/0471250953.bi0121s41 }}</ref> However it is unclear how many of these are unique proteins
|[[Human Proteinpedia]]
|
|The human Proteinpedia is based on HPRD (Human protein reference database)which is a repository hosting over 30,000 human proteins. However it is unclear how many of these are unique proteins
|
|
|-
|-
|Human Protein Atlas
|Human Protein Atlas
|
|[[Human Protein Atlas]]
|
|Swedish-based program
|
|The Swedish Government
|The Swedish Government
|
|It contains roughly 10 million IHC images of a bit less then 25,000 antibodies.<ref name="pmid28940711">{{cite journal | vauthors = Thul PJ, Lindskog C | title = The human protein atlas: A spatial map of the human proteome | journal = Protein Science | volume = 27 | issue = 1 | pages = 233–244 | date = January 2018 | pmid = 28940711 | pmc = 5734309 | doi = 10.1002/pro.3307 }}</ref> But once again it is unclear how many of these are unique
|[[Human Protein Atlas]]
|
|It contains roughly 10 million IHC images of a bit less then 25,000 antibodies. But once again it is unclear how many of these are unique
|
|
|-
|-
|
|CCDS
|
|https://www.ncbi.nlm.nih.gov/CCDS/CcdsBrowse.cgi
|
|NCBI
|[[Manchester University]]
|
|
|[[PRINTS]]
|a compendium of protein fingerprints
|
|[[Protein sequence]] databases
|-
|
|
|
|
|
|
|[[PROSITE]]
|database of [[Protein family|protein families]] and [[Structural domain|domains]]
|
|[[Protein sequence]] databases
|-
|
|
|
|[[Georgetown University]] Medical Center [GUMC]
|
|
|[[Protein Information Resource]]
|
|
|[[Protein sequence]] databases
|-
|
|
|
|
|
|
|[[SUPERFAMILY]]
|library of HMMs representing superfamilies and database of (superfamily and family) annotations for all completely sequenced organisms
|
|[[Protein sequence]] databases
|-
|
|
|
|[[Swiss Institute of Bioinformatics]]
|
|
|[[Swiss-Prot]]
|protein knowledgebase
|
|[[Protein sequence]] databases
|-
|
|
|
|
|
|
|[[National Center for Biotechnology Information|NCBI]]
|protein sequence and knowledgebase (National Center for Biotechnology Information)
|
|[[Protein sequence]] databases
|-
|
|
|
|
|
|Protein DataBank in Europe (PDBe)<ref>{{cite journal |display-authors=6 |vauthors=Mir S, Alhroub Y, Anyango S, Armstrong DR, Berrisford JM, Clark AR, Conroy MJ, Dana JM, Deshpande M, Gupta D, Gutmanas A, Haslam P, Mak L, Mukhopadhyay A, Nadzirin N, Paysan-Lafosse T, Sehnal D, Sen S, Smart OS, Varadi M, Kleywegt GJ, Velankar S |date=January 2018 |title=PDBe: towards reusable data delivery infrastructure at protein data bank in Europe |journal=Nucleic Acids Research |volume=46 |issue=D1 |pages=D486–D492 |doi=10.1093/nar/gkx1070 |pmc=5753225 |pmid=29126160}}</ref>, ProteinDatabank in Japan (PDBj)<ref>{{cite journal |vauthors=Kinjo AR, Bekker GJ, Suzuki H, Tsuchiya Y, Kawabata T, Ikegawa Y, Nakamura H |date=January 2017 |title=Protein Data Bank Japan (PDBj): updated user interfaces, resource description framework, analysis tools for large structures |journal=Nucleic Acids Research |volume=45 |issue=D1 |pages=D282–D288 |doi=10.1093/nar/gkw962 |pmc=5210648 |pmid=27789697}}</ref>, Research Collaboratory for Structural Bioinformatics (RCSB)<ref>{{cite journal |display-authors=6 |vauthors=Rose PW, Prlić A, Altunkaya A, Bi C, Bradley AR, Christie CH, Costanzo LD, Duarte JM, Dutta S, Feng Z, Green RK, Goodsell DS, Hudson B, Kalro T, Lowe R, Peisach E, Randle C, Rose AS, Shao C, Tao YP, Valasatava Y, Voigt M, Westbrook JD, Woo J, Yang H, Young JY, Zardecki C, Berman HM, Burley SK |date=January 2017 |title=The RCSB protein data bank: integrative view of protein, gene and 3D structural information |journal=Nucleic Acids Research |volume=45 |issue=D1 |pages=D271–D281 |doi=10.1093/nar/gkw1000 |pmc=5210513 |pmid=27794042}}</ref>
|[[Protein Data Bank]]
|(PDB)
|
|[[Protein structure]] databases
|-
|
|
|
|
|
|
|[[Structural Classification of Proteins]] (SCOP)
|
|
|[[Protein structure]] databases
|-
|Protein Structure Classification '''database'''
|
|
|
|
|
|[[CATH]] :
|
|
|[[Protein structure]] databases
|-
|
|
|
|[[Andrej Sali|Sali]] Lab, [[University of California, San Francisco|UCSF]]
|
|
|[[ModBase]]
|database of comparative protein structure models
|
|[[Protein structure prediction|Protein model]] databases
|-
|Similarity Matrix of Proteins
|
|
|
|
|
|[[Similarity Matrix of Proteins|SIMAP]]
|database of protein similarities computed using [[FASTA]]
|
|[[Protein structure prediction|Protein model]] databases
|-
|
|
|
|
|
|
|[[Swiss-model]]
|server and repository for protein structure models
|
|[[Protein structure prediction|Protein model]] databases
|-
|
|
|
|
|
|
|[[AAindex]]
|: database of amino acid indices, amino acid mutation matrices, and pair-wise contact potentials
|
|[[Protein structure prediction|Protein model]] databases
|-
|
|
|
|[[Samuel Lunenfeld Research Institute]]
|
|
|[[BioGRID]]
|general repository for interaction datasets
|
|[[Protein-protein interaction|Protein-protein]] and other molecular interactions
|-
|
|
|
|
|
|
|[[RNA-binding protein database|RNA-binding protein databas]]
|
|
|[[Protein-protein interaction|Protein-protein]] and other molecular interactions
|-
|
|
|
|[[University of California|Univ. of California]]
|
|
|[[Database of Interacting Proteins]]
|
|
|[[Protein-protein interaction|Protein-protein]] and other molecular interactions
|-
|
|
|
|([[EMBL-EBI]])
|
|
|[[IntAct|IntAct:]]<ref name="pmid14681455">{{cite journal |display-authors=6 |vauthors=Hermjakob H, Montecchi-Palazzi L, Lewington C, Mudali S, Kerrien S, Orchard S, Vingron M, Roechert B, Roepstorff P, Valencia A, Margalit H, Armstrong J, Bairoch A, Cesareni G, Sherman D, Apweiler R |date=January 2004 |title=IntAct: an open source molecular interaction database |journal=Nucleic Acids Research |volume=32 |issue=Database issue |pages=D452-5 |doi=10.1093/nar/gkh052 |pmc=308786 |pmid=14681455}}</ref>
|open-source database for molecular interactions
|
|[[Protein-protein interaction|Protein-protein]] and other molecular interactions
|-
|
|
|
|
|
|
|[[STRING|String]]
|an open source molecular interaction database to study interactions between proteins
|
|[[Protein-protein interaction|Protein-protein]] and other molecular interactions
|-
|
|
|
|
|
|
|[[Human Protein Atlas]]
|aims at mapping all the human proteins in cells, tissues and organs
|
|[[Protein production|Protein expression]] databases
|-
|ProteinModelPortal
|[http://www.proteinmodelportal.org/ Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase]
|??
|??
|
|??
|??
|
|
|-
|
|
|DisProt
|
|https://www.disprot.org/
|3D structure protein databases
|ELIXIR infrastructure
|received funding from the European Union’s Horizon 2020
|??
|Swiss Prot/Uni Prot, CATH, Pfam, Europe PMC, BITEM, ECO, Geneontology
|-
|-
|SMR
|SMR
|https://swissmodel.expasy.org/repository/
|[http://swissmodel.expasy.org/repository/ Database of annotated 3D protein structure models]
|University of Basel
|University of Basel
|
|The Swiss goverment
|The Swiss goverment
|??
|
|
|
|
|
|3D structure protein databases
|-
|-
|DisProt
|ProteinModelPortal
|[http://www.disprot.org/ Database of Protein Disorder]
|https://www.proteinmodelportal.org/
|ELIXIR infrastructure
|Unkown
|[[Indiana University School of Medicine]], [[Temple University]], [[University of Padua]]
|Unkown
|funding from the European Union’s Horizon 2020
|??
|Swiss Prot/Uni Prot, CATH, Pfam, Europe PMC, BITEM, ECO, Geneontology
|[[DisProt]]
|database of experimental evidences of disorder in proteins
|
|3D structure protein databases, [[Protein sequence]] databases
|-
|MobiDB
|[http://mobidb.bio.unipd.it/ Database of intrinsically disordered and mobile proteins]
|John Moult, Christine Orengo, Predrag Radivojac
|[[University of Padua]]
|Italian Goverment
|
|[[MobiDB]]
|database of intrinsic protein disorder annotation
|
|
|3D structure protein databases, [[Protein sequence]] databases
|-
|-
|ModBase
|ModBase
|https://modbase.compbio.ucsf.edu/modbase-cgi/index.cgi
|[http://modbase.compbio.ucsf.edu/modbase-cgi/index.cgi Database of Comparative Protein Structure Models]
|Ursula Pieper, Ben Webb, Narayanan Eswar, Andrej Sali Roberto Sanchez
|Ursula Pieper, Ben Webb, Narayanan Eswar, Andrej Sali Roberto Sanchez
|
|UCSF, Sali Lab
|UCSF, Sali Lab
|??
|
|
|
|
|
|3D structure protein databases
|-
|-
|PDBsum
|PDBsum
|http://www.ebi.ac.uk/thornton-srv/databases/pdbsum/
|[http://www.ebi.ac.uk/pdbsum/ Pictorial database of 3D structures in the Protein Data Bank]
|European Bioinformatics Institute 2013
|European Bioinformatics Institute 2013
|
|Wellcome Trust
|Wellcome Trust
|
|
|
|
|3D structure protein databases
|-
|CCDS
|[https://www.ncbi.nlm.nih.gov/CCDS/CcdsBrowse.cgi The Consensus CDS protein set database]
|NCBI
|
|??
|??
|
|
|
|
|
|Sequence databases
|-
|-
|DDBJ
|MobiDB
|[http://www.ddbj.nig.ac.jp/ DNA Data Bank of Japan]
|https://mobidb.bio.unipd.it/
|John Moult, Christine Orengo, Predrag Radivojac
|Unkown
|??
|??
|
|??
|
|
|
|
|Sequence databases
|-
|ENA
|[http://www.ebi.ac.uk/ena European Nucleotide Archive]
|??
|
|??
|
|
|
|
|Sequence databases
|-
|GenBank
|[https://www.ncbi.nlm.nih.gov/genbank/ GenBank nucleotide sequence database]
|??
|
|??
|
|
|
|
|Sequence databases
|-
|Refseq
|[https://www.ncbi.nlm.nih.gov/refseq/ NCBI Reference Sequence Database]
|??
|
|??
|
|
|
|
|Sequence databases
|-
|UniGene
|[https://www.ncbi.nlm.nih.gov/unigene/ Database of computationally identifies transcripts from the same locus]
|??
|
|??
|
|
|
|
|Sequence databases
|-
|UniProtKB
|[http://www.uniprot.org/ Universal Protein Resource (UniProt)]
|??
|
|??
|
|
|
|
|Sequence databases
|-
|Swiss Prot/Uni Prot
|https://www.sib.swiss/swiss-prot,https://www.uniprot.org/
|
|SIB Swiss Institute of Bioinformatics
|European Bioinformatics Institute (EMBL-EBI)
|
|
|
|Swiss-Prot has collected over 81 000 variants in roughly 13,000 human protein sequence records from peer-reviewed literature. It is unclear how many unique proteins types are present in the database.
|
|
|}
|}
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</div></div></div>


== See also ==
== See also ==

Revision as of 08:36, 23 July 2023

This template is being used in the wrong namespace. To nominate this talk page for deletion, go to Miscellany for deletion.

There are many speculations to the number of proteins which could potentially be made,[1][2][3][4] however various sources agree on an estimated 10,000 proteins which are relevant to the human body.[5][6][7][8] These estimates are thanks to recent advances in technology leading to the birth of the field of Proteomics. Another consensus which can also be found is that it takes 20000-25000 Proteins to make a human work and that our cells have the potential to make around a 100 000 different proteins depending on what is most convenient in the enviroment we live in.[9][10] Even though this seems like a fair estimate, it is hard to find an emperical database which claims to list more then 10 000 proteins. Another way to approach it is by looking from the bottom up there are ~20,000 protein coding genes in the human genome, (of which it is estimated that 12,733 already have Wikipedia articles (the Gene Wiki) about them). If wone where to Including splice variants, some argue that there could be as many as 500,000 unique human proteins.[11]

This is a list for only those proteins which have been found in the human body so far. It contains about 1100 unique proteins (all of which have their own wiki article), some of which are listed multiple times waiting to be merged into one row. After the merging work there is still about 9200 proteins yet to be described and listed.

Proteins

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[expand]
name Protein type location Produced by Folding Variations Function(s)
2',3'-Cyclic-nucleotide 3'-phosphodiesterase Signal protein myelin oligodendrocytes
3-hydroxyisobutyrate dehydrogenase Neural Cells[12]
5-lipoxygenase-activating protein
Methionine synthase
5'-3' exoribonuclease 2
7-Dehydrocholesterol reductase
11β-Hydroxysteroid dehydrogenase type 1
21-Hydroxylase
24-Dehydrocholesterol reductase
25-Hydroxyvitamin D 1-alpha-hydroxylase
2700099C18Rik
Actin Fibrous protein Cytoskeletal proteins
Arp2/3 Fibrous protein Cytoskeletal proteins
A68 protein
ACAD10 polyclonal antibody or epitope
ACOT13
A1CF
A4GALT enzyme(EC number?) Catalyst
ACAA1
ACAA2
ACACA
ACACB
ACAD8 enzyme (EC Number?) catabolism of the branched-chain amino acid valine
ACAD9
Acalabrutinib Used as treatment for certain kinds of cancer(is this naturally occurent? or only a drug?)
ACAT1
ACAT2
ACBD3
ACD (gene)
ACER1
ACER2
ACER3
ACIN1
ACOT2
ACOT4
ACOT6 enzyme catalyze the hydrolysis of various Coenzyme A esters of various molecules to the free acid plus CoA
ACOT7
ACOT8
ACOT11
ACOT12
ACOX1
ACOX3
ACP1
ACP2
Lysophosphatidic acid phosphatase type 6
ACRV1
ACSBG1
ACSBG2
ACSL1
ACSL3
ACSL4
ACSL5
ACSL6
ACSM2B
ACSM3
ACSS2
ACTA2
ACTC1
ACTG2
ACTH receptor
ACTL6A
ACTL6B
ACTL7A
ACTR1A
ACTR1B
ACTR2
ACTR3
ACTR3B
ACVR1
ACVR1B
ACVR1C
ACVR2A
ACVR2B
ACVRL1
ACY1
Acyl-CoA thioesterase 9
ACYP1
ACYP2
ADAM2
ADAM7
ADAM10
ADAM11
ADAM12
ADAM15
ADAM17
ADAM18
ADAM19
ADAM22
ADAM23
ADAM28
Adapter molecule crk
ALG13
Alpha-2 adrenergic receptor
Alpha-actinin-4
Amelogenin
AMY1C
Angiopoietin-like proteins
ANKRD1
ANKS4B
Ankyrin-2
ANLN
Adenomatous polyposis coli
ARF6
ARHGAP18
ARHGAP25
Actibind
Actin nucleation core
Actin-binding protein
Actin, cytoplasmic 2
ARHGDIB
ARL6IP4
ARL6IP6
Arrestin beta 2
ASIC5
ASTE1
ATG4D
ATXN7L2
Coronin Fibrous protein Cytoskeletal proteins
Dystrophin
Formin
FtsZ
Gloverin
Keratin
Myosin
Tubulin
B3GALNT2
Base excision repair
BECN1
BPIFA1
BPIFA2
BPIFA3
BPIFB1
BPIFB2
BPIFB3
BPIFB4
BPIFB6
BRAT1
BRD9
BRIP1
Bromo adjacent homology domain containing 1
Bump and hole
Butyrophilin
C-type lectin
C1orf21
C1orf38
C1orf74
C1orf185
C2orf54
C5orf34
C5orf45
C5orf46
C6orf201
C6orf222
C8orf48
C9orf156
C11orf42
C11orf52
C11orf53
C13orf38
C14orf80
C16orf71
C16orf90
C16orf95
C17orf75
C20orf202
C22orf31
CACNA1B
CALHM1
Calpain-8
CAMSAP2
Cancer/testis antigen 83
CARMIL1
Carnitine palmitoyltransferase II
Caspase-activated DNase
Caveolin 1
CBX7 (gene)
CCDC11
CCDC47
Ccdc78
CCDC104
Coiled-coil domain-containing protein 135
CCDC176
CD58
CDYL2
CEP89
CEP128
Ceramide synthase 4
Ceramide synthase 5
CFAP47
CFC1
CGB5
Choline transporter
Chondroitin sulfate proteoglycan
CHRFAM7A
Chromosome 9 open reading frame 135
CKLF (gene)
CKLF like MARVEL transmembrane domain containing 6
CKLF like MARVEL transmembrane domain containing 7
CKLF like MARVEL transmembrane domain-containing 1
CKLF like MARVEL transmembrane domain-containing 4
CKLF like MARVEL transmembrane domain-containing 8
CKLF-like MARVEL transmembrane domain-containing 5
CKLF-like MARVEL transmembrane domain-containing family
CLIP4
CMTM2
CMTM3
CMTX2
CMTX3
CNOT4
COA5
COA7
Coiled-coil domain containing 17
COMMD3-BMI1
COX6A1
COX6B1
COX14
COX20
CRACD-like protein
CRYL1
CSNK1E
CTDNEP1
CTU2
CXorf36
CXorf38 Isoform 1
CXorf67
CYC1
Cyclin D/Cdk4
DCTN6
DDI1
DEGS2
DEL16P12.1P11.2
DEL17P13.1
Delta-sarcoglycan
DFNY1
DGLUCY
DHRS1
DHRS7
DIP2B
DNAH7
Dnaj heat shock protein family (hsp40) member c12
Doublecortin like kinase 3
DPF1
DPM2
DPY19L2
DUX4
Dystrophin-associated protein Fibrous protein Cytoskeletal proteins
Formin Fibrous protein Cytoskeletal proteins
FtsZ Fibrous protein Cytoskeletal proteins
Gloverin Fibrous protein Cytoskeletal proteins
Keratin Fibrous protein Cytoskeletal proteins
Myosin Fibrous protein Cytoskeletal proteins
Tubulin Fibrous protein Cytoskeletal proteins
Collagen Extracellular matrix proteins
Elastin Extracellular matrix proteins
F-spondin Extracellular matrix proteins
Pikachurin Extracellular matrix proteins
Fibronectin Extracellular matrix proteins
Serum Amyloid P Component Plasma proteins Globular proteins
Serum albumin Plasma proteins Globular proteins
C1-inhibitor - Complement proteins Coagulation factors Globular proteins
C3-convertase - Complement proteins Coagulation factors Globular proteins
Factor VIII Coagulation factors Globular proteins
Factor XIII Coagulation factors Globular proteins
Protein C Coagulation factors Globular proteins
Protein S Coagulation factors Globular proteins
Protein Z Coagulation factors Globular proteins
Protein Z-related protease inhibitor Coagulation factors Globular proteins
Thrombin Coagulation factors Globular proteins
Von Willebrand Factor Coagulation factors Globular proteins
C-reactive protein Acute phase proteins Globular proteins
Hemoglobin (oxyhemoglobin and deoxyhemoglobin) Hemoproteins Globular proteins
Cadherin Cell adhesion Globular proteins
Ependymin Cell adhesion Globular proteins
Integrin Cell adhesion Globular proteins
NCAM Cell adhesion Globular proteins
Selectin Cell adhesion Globular proteins
ECSIT
EHD3
EIF4A
Eleidin
ELL3
EMID1
Endostatin
Enkephalinase
ER-X
ERCC4
ERCC5
ERVK6
ERx
ETHE1
EVA1A
FABP9
FAHD1
FAM3D
FAM13C
FAM20A
FAM76A
Fam89A
FAM104A
FAM122A (gene)
FAM129C
FAM149B1
FAM163A
FAM166B
FAM180b
FAM181A
FAM200A
FANCB
FANCD2
FANCF
FANCI
FANCM
FASTKD3
FBP1
FBXO38
FCMR
FGD1
FGF5
Fibrinogen c domain containing 1
Ficolin
Filamin
FKBP7
Flavin adenine dinucleotide synthetase 1
FNIP1
FOXC2-AS1
FRA1J
FRA3A
FRMPD4
FSCB
G0S2
GABA transporter type 2
Gamma-glutamyltransferase 6
GATC (gene)
GcMAF
Gdnf-inducible zinc finger protein 1
GLRX5
GLS2
Glucagon rescue
Glutamate receptor-interacting protein
Glutamate-rich protein 4
Glycylpeptide N-tetradecanoyltransferase 1
GNAS complex locus
GOLGA8H
GPHB5
Gq-mER
GRDX
GRINA
HACL1 (gene)
Haem carrier protein 1
HAPLN2
Helicase, POLQ-like
HFM1
Hgh1 homolog
HHIPL1
HIKESHI
HIST1H4A
HIST1H4C
HIST1H4D
HIST1H4E
HIST1H4G
HJURP
Hla complex group 22
HLA-DRB3
Hydroxymethylglutaryl-CoA synthase
HMGCS2
HMGXB3
HMNJ
Hmp19 protein
HOXA10-HOXA9
Hp53int1
HSPB7
Huntingtin
Huntingtin Interacting Protein
IDDM11
IFFO1
IFIT proteins
Igf like family member 3
IGLJ3
IL17RD
Immunoglobulin heavy constant alpha 1
INF2
Insulin analog
Insulin aspart
Insulin degludec
Insulin degludec/insulin aspart
Insulin glargine
Insulin like 6
Insulin lispro
Inter-alpha-trypsin inhibitor
Interferon-induced transmembrane protein 2
Interleukin-12 subunit beta
Intracellular calcium-sensing proteins
IQSEC2
JMJD1C
KAHRP
KDELR
KDM3A
KDM6B
KDM7A
KDM8
KIAA0825
KIAA0895
KIAA0895L
KIAA1549L (gene)
KIF1A
KIF1C
KIF2A
KIF2C
KIF4A
KIF5B
KIF5C
KIF9
KIF18A
Kinesin-like protein KIF3C
KIR2DS1
KSR2
LACC1
LACTB2
LENG9
Leucine-rich repeats and death domain containing 1
LIN28B (gene)
LINC00899
LINC01137
Lipoprotein receptor-related protein
LMLN
LOC100272216
LOC100533655
LOC105377021
Long intergenic non-protein coding rna 312
LRRC8C
LSMEM1
Lung cancer susceptibility 3
Ly6/plaur domain containing 5
MAGEA5
Major basic protein
Major histocompatibility complex, class I-related
Major histocompatibility complex, class II, DQ alpha 1
Major vault protein
Maltase-glucoamylase
Mammaglobin-A
Mammaglobin-B
MTOR
Mannan-binding lectin
MAP3K15
Maspin
Matrix metallopeptidase 12
Matrix metallopeptidase 13
MB21D1
MBD3
MBTD1
Mdm2
MED20
Megakaryocyte-associated tyrosine kinase
Melanin-concentrating hormone receptor 1
Melanin-concentrating hormone receptor 2
Melanocortin 1 receptor
Melanocortin 3 receptor
Melanocortin 4 receptor
Melanocortin 5 receptor
Melanoma inhibitory activity
Melanophilin
Melanopsin
Melanotransferrin
Melatonin receptor 1A
Melatonin receptor 1B
Membrane androgen receptor
Membrane estrogen receptor
Membrane glucocorticoid receptor
Membrane mineralocorticoid receptor
Membrane progesterone receptor
Membrane steroid receptor
Merlin (protein)
Mesothelin
Metallothionein 1A
Metallothionein 1G
Metallothionein 2A
METAP2
Methyl-CpG-binding domain protein 2
Methylenetetrahydrofolate reductase
Methylmalonyl-CoA mutase
METRNL
Mevalonate kinase
Microphthalmia-associated transcription factor
MicroRNA 4521
Microseminoprotein, prostate associated
Microsomal glutathione S-transferase 1
Microsomal triglyceride transfer protein
Midkine
Mineralocorticoid receptor
MIR7-1
MIR9-3HG
MIR95
MIR361
MIR517C
MIR3648
MIS18BP1
NDUFA3
Mitochondrial 2-oxodicarboxylate carrier
Mitogen-activated protein kinase 9
KMT2A
Moesin
Monoamine oxidase A
Monocarboxylate transporter 9
Monooxygenase DBH-like 1
Morn repeat containing 1
Mothers against decapentaplegic homolog 1
Mothers against decapentaplegic homolog 2
Mothers against decapentaplegic homolog 3
Mothers against decapentaplegic homolog 4
Mothers against decapentaplegic homolog 5
Mothers against decapentaplegic homolog 6
Mothers against decapentaplegic homolog 7
Mothers against decapentaplegic homolog 9
Motilin receptor
Msh homeobox 2
MTOR inhibitors
MTORC1
MTORC2
Μ-opioid receptor
Mucin short variant S1
Mucin-1
Multisynthetase complex auxiliary component p38
Munc-18
Muscarinic acetylcholine receptor M4
Muscarinic acetylcholine receptor M5
Mx1
MYB (gene)
Myc
MYD88
Myelin basic protein
Myelin protein zero
MYL12B
MYO7A
Myocyte-specific enhancer factor 2A
MyoD
Myod family inhibitor domain containing
Myogenin
Myoglobin
Myomegalin
Myosin binding protein C, cardiac
Myostatin
MYOT
Myotonin-protein kinase
Myotubularin 1
MZB1
MZF1-AS1
N-acetyl-D-glucosamine kinase
N-acetyltransferase 2
N-ethylmaleimide sensitive fusion protein
N-Myc
N-myc-interactor
N-type calcium channel
NAA15
NAB1
NAB2
NACA (gene)
NADH dehydrogenase (ubiquinone), alpha 1
NADSYN1
NAGA (gene)
NAGPA
NAIP (gene)
Naked cuticle 1
Naked cuticle 2
NLRP3
NANS
NAP1L1
NAP1L4
NAPA (gene)
NAPB
NAPG
NAPSA
NARS (gene)
NASP (gene)
NAT5
NAT9
NAT10
NAV1
NAV2
NBEAL1
NBPF3
NBPF10
NBPF15
NBR1
NCAPD2
NCAPD3
NCAPG
NCAPG2
NCAPH
NCF1C
NCK1
NCK2
NCKAP1
NCKIPSD
NCLN
NCOA5
NCOA6
NCOA7
NCR1
NCR2
NCR3
NDC80
NDE1
NDEL1
NDFIP2
NDN (gene)
NDOR1
NDRG1
NDRG2
NDRG4
NDST1
NDST2
NDST3
NDUFA2
NDUFA5
NDUFA6
NDUFA7
NDUFA8
NDUFA9
NDUFA12
NDUFA13
NDUFAF1
NDUFAF5
NDUFB1
NDUFB2
NDUFB6
NDUFB7
NDUFB8
NDUFB9
NDUFB10
NDUFB11
NDUFC1
NDUFC2
NDUFS1
NDUFS2
NDUFS3
NDUFS4
NDUFS5
NDUFS6
NDUFS7
NDUFS8
NDUFV1
NDUFV2
NDUFV3
NECAP2
NEDD1
NEDD4
NEDD4L
NEDD8
NEDD9
NEFM
NEGR1
NEIL1
NEIL2
NEK2
NEK3
NEK6
NEK8
NEK9
NELL1
NELL2
NEO1
Nepidermin
NET1
Neurexin
NEURL
NEURL2
NEUROD1
NEUROD2
Neurofilament light polypeptide
Neurogenin-1
Neurogenin-2
Neuroligin
NeXtProt
NFASC
Nfat activating protein with itam motif 1
NFAT5
NFATC1
NFATC2
NFATC3
NFATC4
NFE2
NH41
NHLRC2
Nidogen
Nidogen-1
NIMA-related kinase 1
NKG7
Norrin
NPH insulin
NSUN2
Nuclear prelamin A recognition factor
Nuclear protein in testis gene
Solute carrier organic anion transporter family member 4c1
OR4F5
OR6C75
OSER1
OTUD1
OXA1L
Oxytocinase
P3 peptide
P21-activated kinases
PABPC4L
PALB2
Pappalysin-1
PARK3
Patched
PD-1 and PD-L1 inhibitors
Perilipin-1
PET100
Pevonedistat
PGAP1
PHF2
PLAC1
Plastin
PLBD1
PLD5
PLEKHG5
POLR3G
POTEB
PPIP5K2
PPP1R27
Pramlintide
PrimPol
PRMT7
PRMT8
Progerin
Proline rich 5 like
Proline-rich 12
Proline-rich protein 29
Proline-rich protein 30
Protein phosphatase 2
PRP36
PRR16
PRR23C
PRR35
PTTG3P (gene)
Putative uncharacterized protein C6orf52
PYGO1
QRICH1
QSER1
RAB2B
RAB7L1
RAB11B
RAD23A
RALGPS1
RASEF
RBFOX1
RBM47
RDH16
REG1
Regular insulin
RERG
RG9MTD2
RIMBP2
RIOX1
RIP kinase
RNA binding protein, fox-1 homolog (c. elegans) 3
RNASEH2B
RNF114
Rotatin
RP11-267C16.1
RTL6
RTRAF
SAP1a
Sca-1
Sclerostin
SDHAF1
SDHAF2
SEC24A
Selenium responsive proteins
Serine/arginine-rich splicing factor 1
SETD6
SGK
SGSM2
Sialidase-1
Sialidase-2
Sialidase-3
Sialidase-4
SIDT2
SKIDA1
SLC8B1
SLC17A3
SLC22A24
SLC25A16
SLC25A25-AS1
SLC25A29
SLC35F1
SLC41A1
SLC46A3
SLFN12
SLX4IP
Small copper carrier
Small integral membrane protein 14
SMC3
SMCHD1
SMCO4
SMIM15
SMIM20
SOCS4
Sodium/potassium/calcium exchanger 4
Solute carrier family 17 (vesicular glutamate transporter), member 6
Solute carrier family 22 member 15
SOX30
SPNS2
SPRED1
SPRED2
Sprifermin
SPRY1
SPRY2
SPRY3
SPRY4
SPT20
Srp receptor alpha subunit
SSMEM1
STAC3
Stathmin
STOX1
STRO-1
Soluble urokinase plasminogen activator receptor
Suppression of tumorigenicity 8 (ovarian)
Synapsin 2
Synapsin I
Synaptojanin 1
SYNJ2
SZT2
TEKTIP1
TESPA1
Testis expressed 15
Thromboplastin
Thymidine kinase 2, mitochondrial
Thyroxine-binding proteins
TIGIT
Tim9-Tim10 complex
Tissue inhibitor of metalloproteinase
TMCO4
TMEM33
TMEM143
TMEM165
TMEM171
TMEM200A
TMEM215
TMEM239
TMEM248
TMEM249
TMEM271
TMEM275
TMIGD2
TMPRSS4
TONSL
TP53-inducible glycolysis and apoptosis regulator
Trafermin
TRANK1
Transmembrane protein 134
Transmembrane protein 150b
TRGV1
TRIM14
TRIM69
TRNP1
TSEN54 (gene)
TSR3
TTC7A
TTC28
TTC37
Tuberous sclerosis protein
TUNAR
Ubiquitin C
Ubiquitin conjugating enzyme e2 q2
UNC13A
UNC93A
Uncharacterized LOC644249 gene
UQCC2
UQCC3
UQCR11
UQCRC2
USMG5
USP19
VAMAS6 (gene)
Vascular endothelial growth factor
VASH2
Voltage sensitive phosphatase
VPS35L
WDR53
WDR75
WDR90
WFIKKN2
XKR5
YPEL3
ZCCHC6
ZDHHC14
Zfp28 zinc finger protein
Zfp41 zinc finger protein
Zfp69 zinc finger protein
ZFP92
ZFR
Zinc finger and btb domain containing 43
Zinc finger and scan domain containing 30
Zinc finger ccch-type containing 10
Zinc finger homeobox 2
Zinc finger protein 26
Zinc finger protein 84
Zinc finger protein 101
Zinc finger protein 117
Zinc finger protein 121
Zinc finger protein 134
Zinc finger protein 157
Zinc finger protein 175
Zinc finger protein 200
Zinc finger protein 230
Zinc finger protein 257
Zinc finger protein 280b
Zinc finger protein 296
Zinc finger protein 334
Zinc finger protein 347
Zinc finger protein 394
Zinc finger protein 398
Zinc finger protein 433
Zinc finger protein 439
Zinc finger protein 502
Zinc finger protein 506
Zinc finger protein 507
Zinc finger protein 517
Zinc finger protein 530
Zinc finger protein 541
Zinc finger protein 562
Zinc finger protein 577
Zinc finger protein 585b
Zinc finger protein 586
Zinc finger protein 592
Zinc finger protein 620
Zinc finger protein 648
Zinc finger protein 674
Zinc finger protein 679
Zinc finger protein 684
Zinc finger protein 695
Zinc finger protein 696
Zinc finger protein 716
Zinc finger protein 727
Zinc finger protein 737
Zinc finger protein 770
Zinc finger protein 773
Zinc finger protein 780b
Zinc finger protein 784
Zinc finger protein 786
Zinc finger protein 791
Zinc finger protein 836
Zinc finger protein 846
Zinc finger protein 853
Zinc finger, cchc domain containing 23
ZNF30
ZNF207
ZNF320
ZNF337
ZNF367
ZNF383
ZNF444
ZNF548
ZNF669
ZNF831
ZNF837
ZP1
ZXDC
G-protein-coupled receptor
Rhodopsin
Histones
Protamines
CI protein
C-myc
C-myc
FOXP2
FOXP3
MyoD
P53
SRRT
Immunoglobins
Major histocompatibility antigens
T cell receptor
Ferritin
GroEL
Alpha collagen Aging-related proteins
BAG1 Aging-related proteins
BAG3 Aging-related proteins
CCL11 Aging-related proteins
Collagen Aging-related proteins
CYR61 Aging-related proteins
Daf-16 Aging-related proteins
Elastin Aging-related proteins
FGF21 Aging-related proteins
Forkhead Box Protein L2 Aging-related proteins
FOX proteins Aging-related proteins
FOXO3 Aging-related proteins
FOXO4 Aging-related proteins
GDF11 Aging-related proteins
Insulin-like growth factor 1 Aging-related proteins
MTOR Aging-related proteins
Methuselah-like proteins Aging-related proteins
NF-κB Aging-related proteins
P53 Aging-related proteins
PARP1 Aging-related proteins
Prelamin-A/C Aging-related proteins
Progerin Aging-related proteins
Regucalcin Aging-related proteins
Sirtuin Aging-related proteins
Sirtuin 1 Aging-related proteins
Sirtuin 6 Aging-related proteins
Actin Autoantigens
Actin nucleation core Autoantigens
Apolipoprotein H Autoantigens
Branched-chain alpha-keto acid dehydrogenase complex Autoantigens
Keratinocyte transglutaminase Autoantigens
Nicotinic acetylcholine receptor Autoantigens
Nuclear bodies Autoantigens
Nuclear pore glycoprotein p62 Autoantigens
Nucleoporin 210kDa Autoantigens
Oxoglutarate dehydrogenase complex Autoantigens
Pyruvate dehydrogenase Autoantigens
Pyruvate dehydrogenase (NADP+) Autoantigens
RA33 Autoantigens
Sp100 nuclear antigen Autoantigens
Tissue transglutaminase Autoantigens
Transglutaminase Autoantigens
Adhesion G protein-coupled receptor Cell adhesion proteins
Angiomotin Cell adhesion proteins
Cadherin Cell adhesion proteins
CapZ Cell adhesion proteins
Claudin Cell adhesion proteins
Collagen receptor Cell adhesion proteins
Cordon-bleu protein-like 1 Cell adhesion proteins
Dystrophin Cell adhesion proteins
E-selectin Cell adhesion proteins
GAIN domain Cell adhesion proteins
Integrin Cell adhesion proteins
L1 (protein) Cell adhesion proteins
L1 family Cell adhesion proteins
Neural cell adhesion molecule Cell adhesion proteins
P-selectin Cell adhesion proteins
Periostin Cell adhesion proteins
PLEKHA7 Cell adhesion proteins
Protocadherin Cell adhesion proteins
Protocadherin 19 Cell adhesion proteins
Selectin Cell adhesion proteins
Soluble cell adhesion molecules Cell adhesion proteins
SPARCL1 Cell adhesion proteins
Utrophin Cell adhesion proteins
Vinculin Cell adhesion proteins
Vitronectin Cell adhesion proteins
Acylation stimulating protein Signal protein - Cytokines
Adipokine Signal protein - Cytokines
Albinterferon Signal protein - Cytokines
Β-Thromboglobulin Signal protein - Cytokines
C-C motif chemokine ligand 27 Signal protein - Cytokines
CCL1 Signal protein - Cytokines
CCL2 Signal protein - Cytokines
CCL3 Signal protein - Cytokines
CCL5 Signal protein - Cytokines
CCL6 Signal protein - Cytokines
CCL7 Signal protein - Cytokines
CCL8 Signal protein - Cytokines
CCL9 Signal protein - Cytokines
CCL11 Signal protein - Cytokines
CCL12 Signal protein - Cytokines
CCL13 Signal protein - Cytokines
CCL14 Signal protein - Cytokines
CCL15 Signal protein - Cytokines
CCL16 Signal protein - Cytokines
CCL17 Signal protein - Cytokines
CCL18 Signal protein - Cytokines
CCL19 Signal protein - Cytokines
CCL20 Signal protein - Cytokines
CCL21 Signal protein - Cytokines
CCL22 Signal protein - Cytokines
CCL23 Signal protein - Cytokines
CCL24 Signal protein - Cytokines
CCL25 Signal protein - Cytokines
CCL26 Signal protein - Cytokines
CCL28 Signal protein - Cytokines
Cerberus (protein) Signal protein - Cytokines
Chemokine Signal protein - Cytokines
Colony-stimulating factor Signal protein - Cytokines
CX3C motif chemokine receptor 1 Signal protein - Cytokines
CX3CL1 Signal protein - Cytokines
CXCL1 Signal protein - Cytokines
CXCL2 Signal protein - Cytokines
CXCL3 Signal protein - Cytokines
CXCL5 Signal protein - Cytokines
CXCL6 Signal protein - Cytokines
CXCL7 Signal protein - Cytokines
CXCL9 Signal protein - Cytokines
CXCL10 Signal protein - Cytokines
CXCL11 Signal protein - Cytokines
CXCL13 Signal protein - Cytokines
CXCL14 Signal protein - Cytokines
CXCL15 Signal protein - Cytokines
CXCL16 Signal protein - Cytokines
CXCL17 Signal protein - Cytokines
Cytokine adsorbing column Signal protein - Cytokines
Cytokine delivery systems Signal protein - Cytokines
Erythropoietin Signal protein - Cytokines
FMS-like tyrosine kinase 3 ligand Signal protein - Cytokines
GcMAF Signal protein - Cytokines
Granulocyte colony-stimulating factor Signal protein - Cytokines
Granulocyte-macrophage colony-stimulating factor Signal protein - Cytokines
Hepatocyte growth factor Signal protein - Cytokines
Hyper-IL-6 Signal protein - Cytokines
IL-10 family Signal protein - Cytokines
Inflammasome Signal protein - Cytokines
Inflammatory cytokine Signal protein - Cytokines
Interferome Signal protein - Cytokines
Interferon Signal protein - Cytokines
Interferon beta-1a Signal protein - Cytokines
Interferon beta-1b Signal protein - Cytokines
Interferon gamma Signal protein - Cytokines
Interferon type I Signal protein - Cytokines
Interferon type II Signal protein - Cytokines
Interferon type III Signal protein - Cytokines
Interferon-stimulated gene Signal protein - Cytokines
Interleukin Signal protein - Cytokines
Interleukin 8 Signal protein - Cytokines
Interleukin 29 Signal protein - Cytokines
Interleukin-1 receptor antagonist protein Signal protein - Cytokines
Interleukin-38 Signal protein - Cytokines
International Cytokine & Interferon Society Signal protein - Cytokines
Leukemia inhibitory factor Signal protein - Cytokines
Leukocyte-promoting factor Signal protein - Cytokines
Lymphokine Signal protein - Cytokines
Lymphotoxin Signal protein - Cytokines
Lymphotoxin alpha Signal protein - Cytokines
Lymphotoxin beta Signal protein - Cytokines
Macrophage colony-stimulating factor Signal protein - Cytokines
Macrophage inflammatory protein Signal protein - Cytokines
Macrophage-activating factor Signal protein - Cytokines
METRNL Signal protein - Cytokines
MHC class III Signal protein - Cytokines
Monokine Signal protein - Cytokines
Myokine Signal protein - Cytokines
Nicotinamide phosphoribosyltransferase Signal protein - Cytokines
Oncostatin M Signal protein - Cytokines
Oprelvekin Signal protein - Cytokines
Platelet factor 4 Signal protein - Cytokines
Promegapoietin Signal protein - Cytokines
RANKL Signal protein - Cytokines
Secretion assay Signal protein - Cytokines
Sickness behavior Signal protein - Cytokines
Stromal cell-derived factor 1 Signal protein - Cytokines
Tumor necrosis factor Signal protein - Cytokines
Tumor necrosis factor superfamily Signal protein - Cytokines
Vascular endothelial growth inhibitor Signal protein - Cytokines
XCL1 Signal protein - Cytokines
XCL2 Signal protein - Cytokines
XCR1 Signal protein - Cytokines
BMPR2 Developmental Protein
Bone morphogenetic protein 1 Developmental Protein
Bone morphogenetic protein 2 Developmental Protein
Bone morphogenetic protein 3 Developmental Protein
Bone morphogenetic protein 4 Developmental Protein
Bone morphogenetic protein 5 Developmental Protein
Bone morphogenetic protein 6 Developmental Protein
Bone morphogenetic protein 7 Developmental Protein
Bone morphogenetic protein 8A Developmental Protein
Bone morphogenetic protein 8B Developmental Protein
Bone morphogenetic protein 10 Developmental Protein
Bone morphogenetic protein 15 Developmental Protein
Mothers against decapentaplegic homolog 1 Developmental Protein
Mothers against decapentaplegic homolog 2 Developmental Protein
Mothers against decapentaplegic homolog 3 Developmental Protein
Mothers against decapentaplegic homolog 4 Developmental Protein
Mothers against decapentaplegic homolog 5 Developmental Protein
Mothers against decapentaplegic homolog 6 Developmental Protein
Mothers against decapentaplegic homolog 7 Developmental Protein
Mothers against decapentaplegic homolog 9 Developmental Protein
Bacterial DNA binding protein DNA-binding proteins
BZIP domain DNA-binding proteins
Chromodomain helicase DNA-binding (CHD) subfamily DNA-binding proteins
Dinoflagellate viral nucleoprotein DNA-binding proteins
DNA polymerase alpha DNA-binding proteins
DNA polymerase beta DNA-binding proteins
DNA polymerase delta DNA-binding proteins
DNA polymerase epsilon DNA-binding proteins
DNA polymerase eta DNA-binding proteins
DNA polymerase lambda DNA-binding proteins
DNA polymerase mu DNA-binding proteins
DNA polymerase nu DNA-binding proteins
DNA-binding protein DNA-binding proteins
DNA-binding protein from starved cells DNA-binding proteins
Dsup DNA-binding proteins
Histone DNA-binding proteins
Histone H2B DNA-binding proteins
Histone-like nucleoid-structuring protein DNA-binding proteins
HUH-tag DNA-binding proteins
Ku (protein) DNA-binding proteins
MECP2 DNA-binding proteins
Mga (protein) DNA-binding proteins
Myogenic regulatory factors DNA-binding proteins
Origin recognition complex DNA-binding proteins
POLI DNA-binding proteins
POLK DNA-binding proteins
Repressor DNA-binding proteins
Single-strand DNA-binding protein DNA-binding proteins
TAR DNA-binding protein 43 DNA-binding proteins
Trithorax-group proteins DNA-binding proteins
Alcohol dehydrogenase (NAD) EC 1.1.1.1 Enzyme(Category:EC 1.1)
Alcohol dehydrogenase (NADP) EC 1.1.1.2 Enzyme(Category:EC 1.1)
Homoserine dehydrogenase EC 1.1.1.3 Enzyme(Category:EC 1.1)
Aminopropanol oxidoreductase EC 1.1.1.4 Enzyme(Category:EC 1.1)
Diacetyl reductase EC 1.1.1.5 Enzyme(Category:EC 1.1)
Glycerol dehydrogenase EC 1.1.1.6 Enzyme(Category:EC 1.1)
Propanediol-phosphate dehydrogenase EC 1.1.1.7 Enzyme(Category:EC 1.1)
glycerol-3-phosphate dehydrogenase (NAD+) EC 1.1.1.8 Enzyme(Category:EC 1.1)
D-xylulose reductase EC 1.1.1.9 Enzyme(Category:EC 1.1)
L-xylulose reductase EC 1.1.1.10 Enzyme(Category:EC 1.1)
Lactate dehydrogenase EC 1.1.1.27 Enzyme(Category:EC 1.1)
Malate dehydrogenase EC 1.1.1.37 Enzyme(Category:EC 1.1)
Isocitrate dehydrogenase EC 1.1.1.42 Enzyme(Category:EC 1.1)
HMG-CoA reductase EC 1.1.1.88 Enzyme(Category:EC 1.1)
Glucose oxidase EC 1.1.3.4 Enzyme(Category:EC 1.1)
L-gulonolactone oxidase EC 1.1.3.8 Enzyme(Category:EC 1.1)
Thiamine oxidase EC 1.1.3.23 Enzyme(Category:EC 1.1)
Xanthine oxidase EC 1.1.3.32 Enzyme(Category:EC 1.1)
Acetaldehyde dehydrogenase EC 1.2.1.10 Enzyme(Category:EC 1.2 )
Glyceraldehyde 3-phosphate dehydrogenase EC 1.2.1.12 Enzyme(Category:EC 1.2 )
Pyruvate dehydrogenase EC 1.2.1.51 Enzyme(Category:EC 1.2 )
Oxoglutarate dehydrogenase EC 1.2.4.2 Enzyme(Category:EC 1.2 )
Dihydrofolate reductase EC 1.5.1.3
Methylenetetrahydrofolate reductase EC 1.5.1.20
Sarcosine oxidase EC 1.5.3.1
Dihydrobenzophenanthridine oxidase EC 1.5.3.12
NADH dehydrogenase EC 1.6.5.3
Urate oxidase EC 1.7.3.3
Nitrite reductase EC 1.7.99.3
Nitrate reductase EC 1.7.99.4
Glutathione reductase EC 1.8.1.7 Enzyme -
Thioredoxin reductase EC 1.8.1.9 Enzyme -
Sulfite oxidase EC 1.8.3.1 Enzyme -
Cytochrome c oxidase EC 1.9.3.1 Enzyme -
Coenzyme Q - cytochrome c reductase EC 1.10.2.2 Enzyme -
Catechol oxidase EC 1.10.3.1 Enzyme -
Laccase EC 1.10.3.2 Enzyme -
Cytochrome c peroxidase EC 1.11.1.5 Enzyme -
Catalase EC 1.11.1.6 Enzyme -
Myeloperoxidase EC 1.11.1.7 Enzyme -
Thyroid peroxidase EC 1.11.1.8 Enzyme -
Glutathione peroxidase EC 1.11.1.9 Enzyme -
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) Enzyme -
Renilla-luciferin 2-monooxygenase EC 1.13.12.5 Enzyme -
Cypridina-luciferin 2-monooxygenase EC 1.13.12.6 Enzyme -
Firefly luciferase EC 1.13.12.7 Enzyme -
Watasenia-luciferin 2-monooxygenase EC 1.13.12.8 Enzyme -
Oplophorus-luciferin 2-monooxygenase EC 1.13.12.13 Enzyme -
Cytochrome P450 oxidase Enzyme - Category:EC 1.14 (act on paired donors with incorporation of molecular oxygen)[edit]
Aromatase EC 1.14.14.1 Enzyme -
CYP2D6 EC 1.14.14.1 Enzyme -
CYP2E1 EC 1.14.14.1 Enzyme -
CYP3A4 EC 1.14.14.1 Enzyme -
Cytochrome P450 oxidase Enzyme -
Nitric oxide dioxygenase Enzyme - Category:EC 1.14.12
Nitric oxide synthase EC 1.14.13.39 Enzyme -
Aromatase EC 1.14.14.1 Enzyme -
CYP2D6 EC 1.14.14.1 Enzyme -
CYP2E1 EC 1.14.14.1 Enzyme -
CYP3A4 EC 1.14.14.1 Enzyme -
Phenylalanine hydroxylase EC 1.14.16.1 Enzyme -
Tyrosinase EC 1.14.18.1 Enzyme -
Superoxide dismutase EC 1.15.1.1 Enzyme -
Ceruloplasmin EC 1.16.3.1 Enzyme -
Leucoanthocyanidin reductase EC 1.17.1.3 Enzyme -
Xanthine dehydrogenase EC 1.17.1.4 Enzyme -
Nicotinate dehydrogenase EC 1.17.1.5 Enzyme -
4-hydroxy-tetrahydrodipicolinate reductase EC 1.17.1.8 Enzyme -
Nicotinate dehydrogenase (cytochrome) EC 1.17.2.1 Enzyme -
Xanthine oxidase EC 1.17.3.2 Enzyme -
Ribonucleotide reductase EC 1.17.4.1 Enzyme -
Ribonucleoside-triphosphate reductase EC 1.17.4.2 Enzyme -
Vitamin K epoxide reductase Enzyme -
Vitamin-K-epoxide reductase (warfarin-sensitive) EC 1.17.4.4 Enzyme -
Vitamin-K-epoxide reductase (warfarin-insensitive) EC 1.17.4.5 Enzyme -
RRM1 Enzyme - Category:EC 1.17.4
RRM2 Enzyme - Category:EC 1.17.4
RRM2B Enzyme - Category:EC 1.17.4
Caffeine dehydrogenase EC 1.17.5.2 Enzyme -
Nitrogenase EC 1.18.6.1 Enzyme -
Nitrogenase (flavodoxin) EC 1.19.6.1 Enzyme -
Arsenate reductase (glutaredoxin) EC 1.20.4.1 Enzyme -
Glutaredoxin Enzyme - Category:EC 1.20.4
Iodotyrosine deiodinase EC 1.21.1.1 Enzyme -
Isopenicillin N synthase EC 1.21.3.1 Enzyme -
Tetrahydrocannabinolic acid synthase EC 1.21.3.7 Enzyme -
Thyroxine 5-deiodinase EC 1.21.99.3 Enzyme -
Iodothyronine deiodinase EC 1.21.99.3 and EC 1.21.99.4 Enzyme -
Deiodinase EC 1.97.1.10 Enzyme -
Catechol-O-methyl transferase EC 2.1.1.6 Enzyme -
DNA methyltransferase EC 2.1.1.72, EC 2.1.1.113, EC 2.1.1.37 Enzyme -
Histone methyltransferase EC 2.1.1.43, EC 2.1.1.125 Enzyme -
Aspartate transcarbamoylase EC 2.1.3.2 Enzyme -
Ornithine transcarbamoylase EC 2.1.3.3 Enzyme -
Transketolase EC 2.2.1.1 Enzyme -
Transaldolase EC 2.2.1.2 Enzyme -
Acetolactate synthase EC 2.2.1.6 Enzyme -
2-Succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase EC 2.2.1.9 Enzyme -
Aminolevulinic acid synthase EC 2.3.1.37 Enzyme -
Choline acetyltransferase EC 2.3.1.6 Enzyme -
Factor XIII EC 2.3.2.13 Enzyme -
Gamma glutamyl transpeptidase EC 2.3.2.2 Enzyme -
Transglutaminase EC 2.3.2.13 Enzyme -
Hypoxanthine-guanine phosphoribosyltransferase EC 2.4.2.8 Enzyme -
Thiaminase EC 2.5.1.2 Enzyme -
Flavin prenyltransferase EC 2.5.1.129 Enzyme -
Alanine transaminase EC 2.6.1.2 Enzyme -
Aspartate transaminase EC 2.6.1.1 Enzyme -
Butyrate kinase (EC 2.7.2.7) Enzyme -
Thiosulfate sulfurtransferase Enzyme - EC 2.8.1.1:
3-mercaptopyruvate sulfurtransferase Enzyme - EC 2.8.1.2:
Thiosulfate—thiol sulfurtransferase Enzyme - EC 2.8.1.3:
tRNA uracil 4-sulfurtransferase Enzyme - EC 2.8.1.4:
Thiosulfate—dithiol sulfurtransferase Enzyme - EC 2.8.1.5:
Biotin synthase Enzyme -
Cysteine desulfurase Enzyme - EC 2.8.1.7:
Lipoyl synthase Enzyme - EC 2.8.1.8:
Molybdenum cofactor sulfurtransferase Enzyme -EC 2.8.1.9:
Thiazole synthase Enzyme- EC 2.8.1.10:
Molybdopterin synthase sulfurtransferase Enzyme - EC 2.8.1.11:
Molybdopterin synthase Enzyme - EC 2.8.1.12:
tRNA-uridine 2-sulfurtransferase Enzyme - (EC 2.8.1.13:)
tRNA-5-taurinomethyluridine 2-sulfurtransferase Enzyme - (EC 2.8.1.14:)
tRNA-5-methyluridine(54) 2-sulfurtransferase Enzyme - (EC 2.8.1.15:)
L-seryl-tRNA(Sec) selenium transferase enzyme - Category:EC 2.9(EC 2.9.1.1: ) transfer selenium-containing groups
EC 2.9.1.2: O-phospho-L-seryl-tRNA(Sec):L-selenocysteinyl-tRNA synthase enzyme - Category:EC 2.9 transfer selenium-containing groups
Nuclease Enzyme - Category:EC 3.1
Endonuclease Enzyme - Category:EC 3.1
Exonuclease Enzyme - Category:EC 3.1
Acid hydrolase Enzyme - Category:EC 3.1.1
Phospholipase A Enzyme - (EC 3.1.1.4)
Acetylcholinesterase Enzyme - (EC 3.1.1.7)
Cholinesterase Enzyme - (EC 3.1.1.8)
Lipoprotein lipase Enzyme - (EC 3.1.1.34)
Ubiquitin carboxy-terminal hydrolase L1 Enzyme - (EC 3.1.2.15)
Phosphatase Enzyme - Category:EC 3.1.3
Alkaline phosphatase Enzyme - (EC 3.1.3.1)
Fructose bisphosphatase Enzyme - (EC 3.1.3.11)
Phospholipase C Enzyme - (EC 3.1.4.3)
CGMP specific phosphodiesterase type 5 Enzyme - (EC 3.1.4.17)
Phospholipase D Enzyme - (EC 3.1.4.50)
Restriction enzyme Enzyme - Type 1 (EC 3.1.21.3)
Restriction enzyme Enzyme - Type 2 (EC 3.1.21.4)
Restriction enzyme Enzyme - Type 3 (EC 3.1.21.5)
Restriction enzyme Type 4 (?) enzyme - Category:EC 3.1.21
Deoxyribonuclease I Enzyme - (EC 3.1.21.1)
RNase H Enzyme - (EC 3.1.26.4)
Ribonuclease Enzyme - Category:EC 3.1.27
Amylase Enzyme - (EC 3.2.1.1)
Sucrase Enzyme - (EC 3.2.1.10)
Chitinase Enzyme - (EC 3.2.1.14)
Lysozyme Enzyme - (EC 3.2.1.17)
Maltase Enzyme - (EC 3.2.1.20)
Lactase Enzyme - (EC 3.2.1.23)
Beta-galactosidase Enzyme - (EC 3.2.1.23)
Hyaluronidase Enzyme - EC 3.2.1.35
Adenosylmethionine hydrolase Enzyme - Category:EC 3.3
S-adenosyl-L-homocysteine hydrolase Enzyme - Category:EC 3.3
Alkenylglycerophosphocholine hydrolase Enzyme - Category:EC 3.3
Alkenylglycerophosphoethanolamine hydrolase Enzyme - Category:EC 3.3
Cholesterol-5,6-oxide hydrolase Enzyme - Category:EC 3.3
Hepoxilin-epoxide hydrolase Enzyme - Category:EC 3.3
Isochorismatase Enzyme - Category:EC 3.3
Leukotriene-A4 hydrolase Enzyme - Category:EC 3.3
Limonene-1,2-epoxide hydrolase Enzyme - Category:EC 3.3
Microsomal epoxide hydrolase Enzyme - Category:EC 3.3
Trans-epoxysuccinate hydrolase Enzyme - Category:EC 3.3
Alanine aminopeptidase Enzyme - Category:EC 3.4.11
Angiotensin converting enzyme Enzyme - Category:EC 3.4.15
Serine protease Enzyme - Category:EC 3.4.21
Chymotrypsin Enzyme - (EC 3.4.21.1)
Trypsin Enzyme - (EC 3.4.21.4)
Thrombin Enzyme - (EC 3.4.21.5)
Factor X Enzyme - (EC 3.4.21.6)
Plasmin Enzyme - (EC 3.4.21.7)
Acrosin Enzyme - (EC 3.4.21.10)
Factor VII Enzyme - (EC 3.4.21.21)
Factor IX Enzyme - (EC 3.4.21.22)
Prolyl oligopeptidase Enzyme - (EC 3.4.21.26)
Factor XI Enzyme - (EC 3.4.21.27)
Elastase Enzyme - (EC 3.4.21.37)
Factor XII Enzyme - (EC 3.4.21.38)
Proteinase K Enzyme - (EC 3.4.21.64)
Tissue plasminogen activator Enzyme - (EC 3.4.21.68)
Protein C enzyme - (EC 3.4.21.69)
Separase Enzyme - (EC 3.4.22.49)
Pepsin Enzyme - (EC 3.4.23.1)
Rennet Enzyme - (EC 3.4.23.4)
Renin Enzyme - (EC 3.4.23.15)
Trypsinogen Enzyme - (EC 3.4.23.18) and (20/21/23/24/26)
Plasmepsin Enzyme - (EC 3.4.23.39)
Matrix metalloproteinase Enzyme - (EC 3.4.24.7)
Metalloendopeptidase Enzyme - Category:EC 3.4.25
Urease Enzyme - (EC 3.5.1.5)
Beta-lactamase Enzyme - (EC 3.5.2.6)
Arginase Enzyme - (EC 3.5.3.1)
Adenosine deaminase Enzyme - (EC 3.5.4.4)
GTP cyclohydrolase I Enzyme - (EC 3.5.4.16)
Nitrilase Enzyme - (EC 3.5.5.1)
Helicase Enzyme - Category:EC 3.6.1
DnaB helicase Enzyme - Category:EC 3.6.1
RecQ helicase Enzyme - Category:EC 3.6.1
ATPase Enzyme - Category:EC 3.6.3
NaKATPase Enzyme - (EC 3.6.3.9)
ATP synthase Enzyme - (EC 3.6.3.14)
Kynureninase Enzyme - EC 3.7.1.3
Haloacetate dehalogenase Enzyme - EC 3.8.1.3
Phosphoamidase Enzyme - EC 3.9.1.1:
Protein arginine phosphatase Enzyme - EC 3.9.1.2:
Phosphohistidine phosphatase Enzyme - EC 3.9.1.3:
N-sulfoglucosamine sulfohydrolase Enzyme - EC 3.10.1.1:
Cyclamate sulfohydrolase Enzyme - EC 3.10.1.2:
Phosphonoacetaldehyde hydrolase enzyme - EC 3.11.1.1:
Phosphonoacetate hydrolase Enzyme - EC 3.11.1.2:
Phosphonopyruvate hydrolase Enzyme - EC 3.11.1.3:
Trithionate hydrolase Enzyme - EC 3.12.1.1:
UDP-sulfoquinovose synthase Enzyme - EC 3.13.1.1:
2'-hydroxybiphenyl-2-sulfinate desulfinase Enzyme - EC 3.13.1.3:
3-sulfinopropanoyl—CoA desulfinase Enzyme - EC 3.13.1.4:
Carbon disulfide hydrolase Enzyme - EC 3.13.1.5:
(CysO sulfur-carrier protein)-S-L-cysteine hydrolase Enzyme - EC 3.13.1.6:
Carbonyl sulfide hydrolase Enzyme - EC 3.13.1.7:
Enzyme - EC 3.13.1.8:
Ornithine decarboxylase Enzyme - (EC 4.1.1.17)
Uridine monophosphate synthetase Enzyme - (EC 4.1.1.23)
Aromatic-L-amino-acid decarboxylase Enzyme - (EC 4.1.1.28)
RubisCO Enzyme - (EC 4.1.1.39)
Fructose-bisphosphate aldolase Enzyme - (EC 4.1.2.13)
Carbonic anhydrase Enzyme - (EC 4.2.1.1)
Tryptophan synthase Enzyme - (EC 4.2.1.20)
Phenylalanine ammonia-lyase Enzyme - (EC 4.3.1.24)
Cystathionine gamma-lyase Enzyme - Category:EC 4.4.1
Cystathionine beta-lyase Enzyme - Category:EC 4.4.1
Leukotriene C4 synthase Enzyme - Category:EC 4.4.1
Dichloromethane dehalogenase Enzyme - Category:EC 4.5.1
Halohydrin dehalogenase Enzyme - Category:EC 4.5.1
Adenylate cyclase (EC 4.6.1.1)
Guanylate cyclase (EC 4.6.1.2)
Amino-acid racemase: Phenylalanine racemase (ATP-hydrolysing) Category:EC 5.1.1
Serine racemase Category:EC 5.1.1
Mandelate racemase Enzyme - Category:EC 5.1.2
UDP-glucose 4-epimerase Enzyme - Category:EC 5.1.3
Methylmalonyl CoA epimerase Enzyme - Category:EC 5.1.99
FKBP: FKBP1A Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
FKBP1B Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
FKBP2 Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
FKBP3 Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
FKBP4 Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
FKBP5 Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
FKBP6 Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
FKBP8 Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
FKBP9 Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
FKBP10 Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
FKBPL Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
Cyclophilin Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
Parvulin Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
Prolyl isomerase Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
2-chloro-4-carboxymethylenebut-2-en-1,4-olide isomerase Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
Beta-carotene isomerase Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
Farnesol 2-isomerase Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
Furylfuramide isomerase Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
Linoleate isomerase Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
Maleate isomerase Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
Maleylacetoacetate isomerase Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
Maleylpyruvate isomerase Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
Parvulin Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
Photoisomerase Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
Prolycopene isomerase Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
Prolyl isomerase Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
Retinal isomerase Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
Retinol isomerase Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
Zeta-carotene isomerase Enzyme - Category:EC 5.2 (cis-trans-isomerases)[edit]
Enoyl CoA isomerase Enzyme - (EC 5.3.3.8)
Protein disulfide isomerase Enzyme (EC 5.3.4.1)
Muconate cycloisomerase EC 5.5.1.1
3-carboxy-cis,cis-muconate cycloisomerase EC 5.5.1.2
Tetrahydroxypteridine cycloisomerase EC 5.5.1.3
Inositol-3-phosphate synthase EC 5.5.1.4
Carboxy-cis,cis-muconate cyclase EC 5.5.1.5
Chalcone isomerase EC 5.5.1.6
Chloromuconate cycloisomerase EC 5.5.1.7
(+)-bornyl diphosphate synthase EC 5.5.1.8
Cycloeucalenol cycloisomerase EC 5.5.1.9
Alpha-pinene-oxide decyclase EC 5.5.1.10
Dichloromuconate cycloisomerase EC 5.5.1.11
Copalyl diphosphate synthase EC 5.5.1.12
Ent-copalyl diphosphate synthase EC 5.5.1.13
Syn-copalyl-diphosphate synthase EC 5.5.1.14
Terpentedienyl-diphosphate synthase EC 5.5.1.15
Halimadienyl-diphosphate synthase EC 5.5.1.16
(S)-beta-macrocarpene synthase EC 5.5.1.17
Lycopene epsilon-cyclase EC 5.5.1.18
Lycopene beta-cyclase EC 5.5.1.19
Prosolanapyrone-III cycloisomerase EC 5.5.1.20
D-ribose pyranase EC 5.5.1.n1
Steroid Delta Isomerase EC 5.5.1.22
6-carboxytetrahydropterin synthase Enzyme - Category:EC 6.1
Topoisomerase Enzyme - (type I: EC 5.99.1.2, type II: EC 5.99.1.3)
FARSB Enzyme - (EC 6.1.1.20)
Acetate—CoA ligase Enzyme - EC 6.2.1.1:
Long-chain-fatty-acid—CoA ligase Enzyme - EC 6.2.1.3:
Medium-chain acyl—CoA ligase Enzyme - EC 6.2.1.2:
Succinate—CoA ligase (GDP-forming) Enzyme - EC 6.2.1.4:
Succinate—CoA ligase (ADP-forming) Enzyme - EC 6.2.1.5:
Glutarate—CoA ligase Enzyme -
Cholate—CoA ligase Enzyme - EC 6.2.1.7:
Oxalate—CoA ligase Enzyme - EC 6.2.1.8:
Malate—CoA ligase Enzyme - EC 6.2.1.9:
Acid—CoA ligase (GDP-forming) Enzyme - EC 6.2.1.10:
Biotin—CoA ligase Enzyme - EC 6.2.1.11:
4-coumarate—CoA ligase Enzyme - EC 6.2.1.12:
Acetate—CoA ligase (ADP-forming) Enzyme - EC 6.2.1.13:
6-carboxyhexanoate—CoA ligase Enzyme - EC 6.2.1.14:
Arachidonate—CoA ligase Enzyme - EC 6.2.1.15:
Acetoacetate—CoA ligase Enzyme - EC 6.2.1.16:
Propionate—CoA ligase Enzyme - EC 6.2.1.17:
Citrate—CoA ligase Enzyme - EC 6.2.1.18:
Long-chain-fatty-acid-luciferin-component ligase Enzyme - EC 6.2.1.19:
Long-chain-fatty-acid-(acyl-carrier-protein) ligase Enzyme - EC 6.2.1.20:
Transferred entry: 6.2.1.30 Enzyme - EC 6.2.1.21:
(citrate (pro-3S)-lyase) ligase Enzyme - EC 6.2.1.22:
Dicarboxylate—CoA ligase Enzyme - EC 6.2.1.23:
Phytanate—CoA ligase Enzyme - EC 6.2.1.24:
Benzoate—CoA ligase Enzyme - EC 6.2.1.25:
o-succinylbenzoate—CoA ligase Enzyme - EC 6.2.1.26
4-hydroxybenzoate—CoA ligase Enzyme - EC 6.2.1.27:
3-alpha,7-alpha-dihydroxy-5-beta-cholestanate—CoA ligase Enzyme - EC 6.2.1.28:
Transferred entry: 6.2.1.7 Enzyme - EC 6.2.1.29:
Phenylacetate—CoA ligase Enzyme - EC 6.2.1.30:
2-furoate—CoA ligase Enzyme - EC 6.2.1.31:
Anthranilate—CoA ligase Enzyme - EC 6.2.1.32:
4-chlorobenzoate—CoA ligase Enzyme - EC 6.2.1.33:
Trans-feruloyl-CoA synthase Enzyme - EC 6.2.1.34:
ACP-SH:acetate ligase Enzyme - EC 6.2.1.35:
3-hydroxypropionyl-CoA synthase Enzyme - EC 6.2.1.36:
3-hydroxybenzoate—CoA ligase Enzyme - EC 6.2.1.37:
(2,2,3-trimethyl-5-oxocyclopent-3-enyl)acetyl-CoA synthase Enzyme - EC 6.2.1.38:
(butirosin acyl-carrier protein)—L-glutamate ligase Enzyme - EC 6.2.1.39:
4-hydroxybutyrate-CoA ligase Enzyme - EC 6.2.1.40:
3-((3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl)propanoate-CoA ligase Enzyme - EC 6.2.1.41:
3-oxocholest-4-en-26-oate-CoA ligase EC 6.2.1.42:
2-hydroxy-7-methoxy-5-methyl-1-naphthoate-CoA ligase EC 6.2.1.43:
EC 6.2.1.44: 3-(methylthio)propionyl-CoA ligase Enzyme - EC 6.2.1.44: 3-(methylthio)propionyl-CoA ligase
E1 ubiquitin-activating enzyme Enzyme -EC 6.2.1.45:
L-allo-isoleucine--holo-CmaA peptidyl-carrier protein ligase Enzyme - EC 6.2.1.46:
Medium-chain-fatty-acid-(acyl-carrier-protein) ligase Enzyme - EC 6.2.1.47:
Carnitine-CoA ligase Enzyme - EC 6.2.1.48:
Long-chain fatty acid adenylyltransferase FadD28 Enzyme -EC 6.2.1.49:
4-hydroxybenzoate adenylyltransferase FadD22 Enzyme - EC 6.2.1.50:
4-hydroxyphenylalkanoate adenylyltransferase FadD29 Enzyme - EC 6.2.1.51:
L-firefly luciferin-CoA ligase Enzyme - EC 6.2.1.52:
L-proline-L-prolyl-carrier protein ligase Enzyme - EC 6.2.1.53:
D-alanine-D-alanyl-carrier protein ligase Enzyme - EC 6.2.1.54:
E1 SAMP-activating enzyme Enzyme - EC 6.2.1.55:
Glutamine synthetase Enzyme - (EC 6.3.1.2)
Argininosuccinate synthetase Enzyme - (EC 6.3.4.5)
CTP synthase Enzyme- (EC 6.3.4.2)
Pyruvate carboxylase Enzyme - (EC 6.4.1.1)
Acetyl-CoA carboxylase Enzyme - (EC 6.4.1.2)
DNA ligase Enzyme - (EC 6.5.1.1)
Alpha granule Growth factors
Angiopoietin Growth factors
B cell growth and differentiation factors Growth factors
Basic fibroblast growth factor Growth factors
Betacellulin Growth factors
Bone growth factor Growth factors
Bone morphogenetic protein Growth factors
Brain-derived neurotrophic factor Growth factors
C-fos-induced growth factor Growth factors
CTGF Growth factors
Darbepoetin alfa Growth factors
Endoglin Growth factors
Epidermal growth factor Growth factors
Epoetin alfa Growth factors
Epoetin beta Growth factors
Erythropoietin Growth factors
FGF15 Growth factors
FGF15/19 Growth factors
Fibroblast growth factor Growth factors
Fibroblast growth factor 23 Growth factors
Filgrastim Growth factors
FMS-like tyrosine kinase 3 ligand Growth factors
Glia maturation factor Growth factors
Granulocyte colony-stimulating factor Growth factors
Granulocyte-macrophage colony-stimulating factor Growth factors
Growth differentiation factor-9 Growth factors
Growth factor receptor inhibitor Growth factors
Growth Factors (journal) Growth factors
Hematopoietic growth factor Growth factors
Hemopoietic growth factor Growth factors
Heparin-binding EGF-like growth factor Growth factors
Hepatocyte growth factor Growth factors
Insulin-like growth factor Growth factors
Insulin-like growth factor 1 Growth factors
Insulin-like growth factor 2 Growth factors
Keratinocyte growth factor Growth factors
Lipegfilgrastim Growth factors
Murodermin Growth factors
Myostatin Growth factors
Nepidermin Growth factors
Nerve growth factor Growth factors
Neurotrophin-3 Growth factors
Neurotrophin-4 Growth factors
Oncomodulin Growth factors
Osteopromotive Growth factors
Palifermin Growth factors
PDGFB Growth factors
Placental growth factor Growth factors
Platelet-derived growth factor Growth factors
Platelet-derived growth factor receptor Growth factors
Pleiotrophin Growth factors
Proliferative index Growth factors
Somatrogon Growth factors
T-cell growth factor Growth factors
Thrombopoietin Growth factors
Trafermin Growth factors
Transforming growth factor Growth factors
Vascular endothelial growth factor Growth factors
Chimerin 1 GTP-binding protein regulators
Collybistin GTP-binding protein regulators
DOCK (protein) GTP-binding protein regulators
Dock5 GTP-binding protein regulators
GTPase-activating protein GTP-binding protein regulators
Guanine nucleotide exchange factor GTP-binding protein regulators
Guanosine nucleotide dissociation inhibitor GTP-binding protein regulators
IQ motif containing GTPase activating protein GTP-binding protein regulators
Kalirin GTP-binding protein regulators
Son of Sevenless GTP-binding protein regulators
Auxilin Heat shock proteins
Binding immunoglobulin protein Heat shock proteins
Chaperonin Heat shock proteins
CRYAA Heat shock proteins
CRYAB Heat shock proteins
DNAJA1 Heat shock proteins
DNAJA2 Heat shock proteins
DNAJA3 Heat shock proteins
DNAJB1 Heat shock proteins
DNAJB2 Heat shock proteins
DNAJB4 Heat shock proteins
DNAJB6 Heat shock proteins
DNAJB9 Heat shock proteins
DNAJB11 Heat shock proteins
DNAJC1 Heat shock proteins
DNAJC3 Heat shock proteins
DNAJC5 Heat shock proteins
DNAJC7 Heat shock proteins
DNAJC10 Heat shock proteins
DNAJC11 Heat shock proteins
DNAJC13 Heat shock proteins
DNAJC14 Heat shock proteins
DNAJC19 Heat shock proteins
GrpE Heat shock proteins
Heat shock protein family d (hsp60) member 1 pseudogene 2 Heat shock proteins
HslVU Heat shock proteins
Hsp20 Heat shock proteins
Hsp27 Heat shock proteins
Hsp33 Heat shock proteins
Hsp70 Heat shock proteins
Hsp90 Heat shock proteins
Hsp104 Heat shock proteins
HSPA1A Heat shock proteins
HSPA1B Heat shock proteins
HSPA1L Heat shock proteins
HSPA2 Heat shock proteins
HSPA4 Heat shock proteins
HSPA4L Heat shock proteins
HSPA6 Heat shock proteins
HSPA7 Heat shock proteins
HSPA8 Heat shock proteins
HSPA9 Heat shock proteins
HSPA12A Heat shock proteins
HSPA14 Heat shock proteins
HSPB6 Heat shock proteins
MHC class III Heat shock proteins
Abrin Lectins
BanLec Lectins
Bolesatine Lectins
CD22 Lectins
CD33 Lectins
Collectin Lectins
Concanavalin A Lectins
Ficolin Lectins
Galectin Lectins
Galectin-3 Lectins
Intelectin Lectins
Legume lectin Lectins
Mannan-binding lectin Lectins
Modeccin Lectins
Myelin-associated glycoprotein Lectins
N-Acetylglucosamine receptor Lectins
Phytohaemagglutinin Lectins
Ricin Lectins
Selectin Lectins
Soybean agglutinin Lectins
Wheat germ agglutinin Lectins
Chaperome Chaperones(Molecular)
Binding immunoglobulin protein Chaperones(Molecular)
Calnexin Chaperones(Molecular)
Calreticulin Chaperones(Molecular)
Chaperonin Chaperones(Molecular)
Chemical chaperone Chaperones(Molecular)
CLPB Chaperones(Molecular)
ERP29 Chaperones(Molecular)
Foldase Chaperones(Molecular)
GroEL Chaperones(Molecular)
Heat shock protein 47 Chaperones(Molecular)
Holdase Chaperones(Molecular)
Hsp33 Chaperones(Molecular)
Hsp70 Chaperones(Molecular)
Hsp90 Chaperones(Molecular)
HSP90B1 Chaperones(Molecular)
HSPA8 Chaperones(Molecular)
HSPA9 Chaperones(Molecular)
Nucleoplasmin Chaperones(Molecular)
Parvulin-like peptidyl-prolyl isomerase Chaperones(Molecular)
PDIA3 Chaperones(Molecular)
Pharmacological chaperone Chaperones(Molecular)
Aconitase Moonlight Protein
Activating transcription factor 2 Moonlight Protein
Chaperonin Moonlight Protein
Crystallin Moonlight Protein
Cytochrome c Moonlight Protein
Dihydrolipoamide dehydrogenase Moonlight Protein
Enolase Moonlight Protein
Fructose-bisphosphate aldolase Moonlight Protein
Galactokinase Moonlight Protein
Glutamate racemase Moonlight Protein
GroEL Moonlight Protein
GroES Moonlight Protein
Hexokinase Moonlight Protein
MAPK1 Moonlight Protein
Phosphofructokinase Moonlight Protein
Presenilin Moonlight Protein
Pyruvate carboxylase Moonlight Protein
STAT3 Moonlight Protein
Thioredoxin Moonlight Protein
Catastrophin Motor protein
DCTN6 Motor protein
Dynactin Motor protein
Dynein Motor protein
Dynein, axonemal, heavy chain 14 Motor protein
Forisome Motor protein
Heavy meromyosin Motor protein
KIF1A Motor protein
KIF1C Motor protein
KIF2A Motor protein
KIF4A Motor protein
KIF4B Motor protein
KIF5B Motor protein
KIF5C Motor protein
KIF7 Motor protein
KIF9 Motor protein
KIF12 Motor protein
KIF18A Motor protein
KIF19 Motor protein
Kinesin Motor protein
Kinesin 8 Motor protein
Kinesin 13 Motor protein
Kinesin-like protein KIF3C Motor protein
Meromyosin Motor protein
Motility protein A Motor protein
Motility protein B Motor protein
MYH7 Motor protein
MYO1G Motor protein
MYO7A Motor protein
Myosin Motor protein
Myosin light chain Motor protein
PomA Motor protein
PomB Motor protein
Telokin Motor protein
Fungal prion Prion('misfolded protein')
Prion Prion('misfolded protein')
Protein misfolding cyclic amplification Prion('misfolded protein')
Stanley B. Prusiner Prion('misfolded protein')
Real-time quaking-induced conversion Prion('misfolded protein')
Specified risk material Prion('misfolded protein')
Sup35p Prion('misfolded protein')
Surround optical-fiber immunoassay Prion('misfolded protein')
Ure2p Prion('misfolded protein')
Anthopleurin Protein toxins
Omega-Atracotoxin Protein toxins
Calitoxin Protein toxins
ConoServer Protein toxins
Ectatomin Protein toxins
HsTx1 Protein toxins
Lysenin Protein toxins
Paralytic peptides Protein toxins
Pore-forming toxin Protein toxins
Raventoxin Protein toxins
Scorpion toxin Protein toxins
Ssm spooky toxin Protein toxins
ACTH receptor signaling Proteins Reception of body signals(Receptors)
Adiponectin receptor signaling Proteins Reception of body signals(Receptors)
Albondin signaling Proteins Reception of body signals(Receptors)
Aryl hydrocarbon receptor signaling Proteins Reception of body signals(Receptors)
Autoreceptor signaling Proteins Reception of body signals(Receptors)
B-cell receptor signaling Proteins Reception of body signals(Receptors)
BMPR1B signaling Proteins Reception of body signals(Receptors)
BMPR2 signaling Proteins Reception of body signals(Receptors)
Bone morphogenetic protein receptor, type 1 signaling Proteins Reception of body signals(Receptors)
CD28 family receptor signaling Proteins Reception of body signals(Receptors)
CD36 signaling Proteins Reception of body signals(Receptors)
CD85 signaling Proteins Reception of body signals(Receptors)
Coagulation factor II receptor signaling Proteins Reception of body signals(Receptors)
Collagen receptor signaling Proteins Reception of body signals(Receptors)
Cubam signaling Proteins Reception of body signals(Receptors)
CX3C motif chemokine receptor 1 signaling Proteins Reception of body signals(Receptors)
DC-SIGN signaling Proteins Reception of body signals(Receptors)
Decoy receptors signaling Proteins Reception of body signals(Receptors)
Netrin receptor DCC signaling Proteins Reception of body signals(Receptors)
Dependence receptor signaling Proteins Reception of body signals(Receptors)
EF-Tu receptor signaling Proteins Reception of body signals(Receptors)
F2RL3 signaling Proteins Reception of body signals(Receptors)
GAIN domain signaling Proteins Reception of body signals(Receptors)
GPR98 signaling Proteins Reception of body signals(Receptors)
Growth factor receptor signaling Proteins Reception of body signals(Receptors)
Heteroreceptor signaling Proteins Reception of body signals(Receptors)
Hormone receptor signaling Proteins Reception of body signals(Receptors)
Imidazoline receptor signaling Proteins Reception of body signals(Receptors)
Immunoglobulin superfamily signaling Proteins Reception of body signals(Receptors)
Insulin-like growth factor 2 receptor signaling Proteins Reception of body signals(Receptors)
Killer activation receptor signaling Proteins Reception of body signals(Receptors)
Killer-cell immunoglobulin-like receptor signaling Proteins Reception of body signals(Receptors)
Lamin B receptor signaling Proteins Reception of body signals(Receptors)
Low-density lipoprotein receptor gene family signaling Proteins Reception of body signals(Receptors)
Low-density lipoprotein receptor-related protein 8 signaling Proteins Reception of body signals(Receptors)
Neuropeptide receptor signaling Proteins Reception of body signals(Receptors)
Neurotransmitter receptor signaling Proteins Reception of body signals(Receptors)
Neurotrophic factor receptor signaling Proteins Reception of body signals(Receptors)
NKG2D signaling Proteins Reception of body signals(Receptors)
Non-catalytic tyrosine-phosphorylated receptor signaling Proteins Reception of body signals(Receptors)
Obesogen signaling Proteins Reception of body signals(Receptors)
Orphan receptor signaling Proteins Reception of body signals(Receptors)
P-selectin glycoprotein ligand-1 signaling Proteins Reception of body signals(Receptors)
Pattern recognition receptor signaling Proteins Reception of body signals(Receptors)
PGRMC signaling Proteins Reception of body signals(Receptors)
PGRMC2 signaling Proteins Reception of body signals(Receptors)
Progestin and adipoQ receptor signaling Proteins Reception of body signals(Receptors)
Protease-activated receptor 2 signaling Proteins Reception of body signals(Receptors)
Radioligand signaling Proteins Reception of body signals(Receptors)
RAGE (receptor) signaling Proteins Reception of body signals(Receptors)
Receptor potential signaling Proteins Reception of body signals(Receptors)
Receptor–ligand kinetics signaling Proteins Reception of body signals(Receptors)
Receptorome signaling Proteins Reception of body signals(Receptors)
Repulsive guidance molecule A signaling Proteins Reception of body signals(Receptors)
Repulsive guidance molecule B signaling Proteins Reception of body signals(Receptors)
Reticulon 4 receptor signaling Proteins Reception of body signals(Receptors)
Scavenger receptor (immunology) signaling Proteins Reception of body signals(Receptors)
Sigma receptor signaling Proteins Reception of body signals(Receptors)
Signal recognition particle receptor signaling Proteins Reception of body signals(Receptors)
Signaling peptide receptor signaling Proteins Reception of body signals(Receptors)
Signalling lymphocyte activation molecule family signaling Proteins Reception of body signals(Receptors)
Snf3 signaling Proteins Reception of body signals(Receptors)
Somatomedin receptor signaling Proteins Reception of body signals(Receptors)
UNC (biology) signaling Proteins Reception of body signals(Receptors)
UNC-5 signaling Proteins Reception of body signals(Receptors)
Variable lymphocyte receptor signaling Proteins Reception of body signals(Receptors)
Vesicular monoamine transporter signaling Proteins Reception of body signals(Receptors)
Vesicular monoamine transporter 1 signaling Proteins Reception of body signals(Receptors)
Vesicular monoamine transporter 2 signaling Proteins Reception of body signals(Receptors)
XCR1 signaling Proteins Reception of body signals(Receptors)
Xenobiotic-sensing receptor signaling Proteins Reception of body signals(Receptors)
Abrin Ribosome-inactivating protein
Beetin Ribosome-inactivating protein
Cucurmosin Ribosome-inactivating protein
Gelonin Ribosome-inactivating protein
Modeccin Ribosome-inactivating protein
Momordin (protein) Ribosome-inactivating protein
Ricin Ribosome-inactivating protein
RRNA endonuclease Ribosome-inactivating protein
Saporin Ribosome-inactivating protein
Shiga toxin Ribosome-inactivating protein
Trichosanthin Ribosome-inactivating protein
Volkensin Ribosome-inactivating protein
Argonaute RNA-binding protein
Atlas of UTR Regulatory Activity RNA-binding protein
CCR4-Not RNA-binding protein
Cleavage stimulation factor RNA-binding protein
CPEB RNA-binding protein
CRD-BP RNA-binding protein
Dicer RNA-binding protein
Drosha RNA-binding protein
43S preinitiation complex RNA-binding protein
Eukaryotic initiation factor 3 RNA-binding protein
Eukaryotic initiation factor 4F RNA-binding protein
FET protein family RNA-binding protein
HNRNPK RNA-binding protein
MicL sRNA RNA-binding protein
Musashi-1 RNA-binding protein
Musashi-2 RNA-binding protein
NSP3 (rotavirus) RNA-binding protein
Nuclear cap-binding protein complex RNA-binding protein
PABPC1 RNA-binding protein
Poly(A)-binding protein RNA-binding protein
Protein-RNA interface database RNA-binding protein
RAN translation RNA-binding protein
RNA helicase database RNA-binding protein
Roxan (protein) RNA-binding protein
Smaug (protein) RNA-binding protein
Toxin-antitoxin database RNA-binding protein
Toxin-antitoxin system RNA-binding protein
Serpin Serine protease inhibitors
AEBSF Serine protease inhibitors
Alpha-1 antitrypsin Serine protease inhibitors
Alpha 2-antiplasmin Serine protease inhibitors
Antithrombin Serine protease inhibitors
BIA 10-2474 Serine protease inhibitors
C1-inhibitor Serine protease inhibitors
Camostat Serine protease inhibitors
Cospin Serine protease inhibitors
CU-2010 and CU-2020 Serine protease inhibitors
Kallistatin Serine protease inhibitors
Kazal domain Serine protease inhibitors
Maspin Serine protease inhibitors
Methoxy arachidonyl fluorophosphonate Serine protease inhibitors
Microviridin Serine protease inhibitors
Myeloid and erythroid nuclear termination stage-specific protein Serine protease inhibitors
Nafamostat Serine protease inhibitors
Plasminogen activator inhibitor-1 Serine protease inhibitors
Plasminogen activator inhibitor-2 Serine protease inhibitors
PMSF Serine protease inhibitors
Protein C inhibitor Serine protease inhibitors
Protein Z-related protease inhibitor Serine protease inhibitors
SERPINA9 Serine protease inhibitors
SERPINB1 Serine protease inhibitors
SERPINB3 Serine protease inhibitors
SERPINB4 Serine protease inhibitors
SERPINB6 Serine protease inhibitors
SERPINB7 Serine protease inhibitors
SERPINB8 Serine protease inhibitors
SERPINB9 Serine protease inhibitors
SERPINB13 Serine protease inhibitors
SERPINE2 Serine protease inhibitors
SPINT1 Serine protease inhibitors
Upamostat Serine protease inhibitors
Uterine serpin Serine protease inhibitors
Bacterioferritin Storage protein
Ferritin Storage protein
Mitochondrial ferritin Storage protein
Ovalbumin Storage protein
Ovotransferrin Storage protein
Perivitellin-2 Storage protein
Actin nucleation core Structural proteins
Actin remodeling Structural proteins
Amyloid Structural proteins
Anchoring fibrils Structural proteins
Caddisfly silk Structural proteins
Chondrocalcin Structural proteins
Claudin Structural proteins
Coilin Structural proteins
Collagen Structural proteins
Crystallin Structural proteins
Elastic fiber Structural proteins
Elastin Structural proteins
Elaunin Structural proteins
ERM protein family Structural proteins
Extensin Structural proteins
FACIT collagen Structural proteins
Fibrillin Structural proteins
Fibrillogenesis Structural proteins
Fibrous protein Structural proteins
Filaggrin Structural proteins
Formin-2 Structural proteins
Gelatin Structural proteins
Influenza virus nucleoprotein Structural proteins
JUNQ and IPOD Structural proteins
Lamin Structural proteins
Loricrin Structural proteins
Organ-limited amyloidosis Structural proteins
Osteolathyrism Structural proteins
ParM Structural proteins
Protein aggregation Structural proteins
Reticular fiber Structural proteins
Ribophorin Structural proteins
Sclerotin Structural proteins
Sclerotization Structural proteins
Suckerin Structural proteins
Titin Structural proteins
Viral structural protein Structural proteins
Wild-type transthyretin amyloid Structural proteins
Beta-2 transferrin Transferrins
Carbohydrate deficient transferrin Transferrins
Diferric-transferrin reductase Transferrins
Lactoferrin Transferrins
Soluble transferrin receptor Transferrins
Total iron-binding capacity Transferrins
Transferrin Transferrins
Transferrin receptor Transferrins
Transferrin receptor 1 Transferrins
Transferrin receptor 2 Transferrins - Transferrin saturation
Atrophin 1 Transcription coregulators
Calreticulin Transcription coregulators
CARM1 Transcription coregulators
Chromatin structure remodeling (RSC) complex Transcription coregulators
CKLF like MARVEL transmembrane domain containing 6 Transcription coregulators
CKLF like MARVEL transmembrane domain containing 7 Transcription coregulators
CKLF like MARVEL transmembrane domain-containing 8 Transcription coregulators
CKLF-like MARVEL transmembrane domain-containing family Transcription coregulators
Coactivator (genetics) Transcription coregulators
Corepressor Transcription coregulators
CREB-binding protein Transcription coregulators
CRTC1 Transcription coregulators
CRTC2 Transcription coregulators
CRTC3 Transcription coregulators
CTBP1 Transcription coregulators
CTBP2 Transcription coregulators
EP300 Transcription coregulators
Gal4 transcription factor Transcription coregulators
HR (gene) Transcription coregulators
LCOR Transcription coregulators
MED1 Transcription coregulators
MN1 (gene) Transcription coregulators
NCOA4 Transcription coregulators
NCOA5 Transcription coregulators
NCOA6 Transcription coregulators
NCOA7 Transcription coregulators
NRIP1 Transcription coregulators
Nuclear receptor co-repressor 1 Transcription coregulators
Nuclear receptor co-repressor 2 Transcription coregulators
Nuclear receptor coactivator 1 Transcription coregulators
Nuclear receptor coactivator 2 Transcription coregulators
Nuclear receptor coactivator 3 Transcription coregulators
Nuclear receptor coregulators Transcription coregulators
P300-CBP coactivator family Transcription coregulators
PCAF Transcription coregulators
PELP-1 Transcription coregulators
PNRC1 Transcription coregulators
PNRC2 Transcription coregulators
PPARGC1A Transcription coregulators
PPARGC1B Transcription coregulators
Retinoblastoma protein Transcription coregulators
RNF14 Transcription coregulators
SIN3A Transcription coregulators
SIN3B Transcription coregulators
SWI/SNF Transcription coregulators
TGFB1I1 Transcription coregulators
Transcription coregulator Transcription coregulators
TRIM24 Transcription coregulators
TRIM28 Transcription coregulators
TRIM33 Transcription coregulators
Tripartite motif family Transcription coregulators
Whi5 Transcription coregulators
A-1 holin family TC number? Transport protein
A2 holin family TC number? Transport protein
Actinobacterial phage holin family TC number? Transport protein
AGCS family TC number? Transport protein
APC Family TC number? Transport protein
ArpQ holin family TC number? Transport protein
ATP:ADP antiporter family TC number? Transport protein
ATP2B1 TC number? Transport protein
Bacillus spore morphogenesis and germination holin family TC number? Transport protein
Bacterial archaeal holin family TC number? Transport protein
Bacterial Leucine Transporter TC number? Transport protein
Basic amino acid antiporter family TC number? Transport protein
Bcl-2 family TC number? Transport protein
Beta-galactoside permease TC number? Transport protein
Betaine transporter TC number? Transport protein
BlyA holin family TC number? Transport protein
BNIP3 TC number? Transport protein
BP holin family TC number? Transport protein
Brachyspira holin family TC number? Transport protein

Naming Convention for the list

Essential cell biology 5 edition lists: Enzymes(which typically have EC number), Transport proteins(which typically have TC number), Motor Proteins, Storage Proteins, Signal proteins, Receptor Proteins, Transcription Proteins as the most common types of proteins. Finally the make a very broad category of Special-purpose proteins. So far this seems to be the most simple yet sufficient way to split proteins into types

Column name Meaning and convention
name The name of the protein in accordance with Gene nomenclature
Protein type Either: Enzymes(EC number should be added here*), Transport proteins(TC number Should be added here), Motor Proteins, Storage Proteins, Signal proteins, Receptor Proteins, Trranscription Proteins or Special-purpose proteins
Location The Tissue, Organs or place and thing in the body where this protein is used
Produced by The cell which typically produce the protein
Folding Variations This refers to the proteins structural domain or Protein domain

*it should be noted that strictly speaking, and Enzyme Commission number refers to the reaction catalyzed by an enzyme and not the enzyme protein itself. This means that there is often more than one human gene that corresponds to a given EC number.

List of databases containing Human Proteins

See also: List of biological databases

See also: Protein structure database

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Database Short Name Database Name/link to website Provider Datasources Sources of revenue/sponsors Intergrates: Wiki article Desc. Size? Database type
InterPro http://www.ebi.ac.uk/interpro/ ELIXIR infrastructure European Bioinformatics Institute EMBL, The Welcome trust, BBSRC CATH-Gene3D, CDD, HAMAP, MobiDB, PANTHER, Pfam, SMART, SUPERFAMILY, SFLD, TIGRFAMs, InterPro classifies proteins into families and predicts the presence of domains and sites Protein sequence databases
NextProt https://www.nextprot.org/ CALIPHO (is a group at the SIB) Swiss Institute of Bioinformatics https://www.sib.swiss/about/funding-sources UniProt, Cellosaurus, Gnomad, IntAct, SRAA Atlas, Uniprot - GOA, BGEE, COSMIC, MassIVE, Peptide atlas neXtProt a human protein-centric knowledge resource Protein sequence databases
Wiki-pi http://severus.dbmi.pitt.edu/wiki-pi/ Madhavi K. Ganapathiraju At present Wiki-Pi contains 48,419 unique interactions among 10,492 proteins. However it is not clear if this is unique proteins[13] Protein interactoin Database
Human Protein Reference Database Institute of Bioinformatics (IOB), Bangalore, India Human Protein Reference Database One source claims 15000 [13]proteins. But it is unclear how many of these are unique
Sanger Institute Pfam protein families database of alignments and HMMs Protein sequence databases
Human Proteinpedia Institute of Bioinformatics (IOB), Bangalore and Johns Hopkins University, Human Proteinpedia The human Proteinpedia is based on HPRD (Human protein reference database)which is a repository hosting over 30,000 human proteins. However it is unclear how many of these are unique proteins
Human Protein Atlas The Swedish Government Human Protein Atlas It contains roughly 10 million IHC images of a bit less then 25,000 antibodies. But once again it is unclear how many of these are unique
Manchester University PRINTS a compendium of protein fingerprints Protein sequence databases
PROSITE database of protein families and domains Protein sequence databases
Georgetown University Medical Center [GUMC] Protein Information Resource Protein sequence databases
SUPERFAMILY library of HMMs representing superfamilies and database of (superfamily and family) annotations for all completely sequenced organisms Protein sequence databases
Swiss Institute of Bioinformatics Swiss-Prot protein knowledgebase Protein sequence databases
NCBI protein sequence and knowledgebase (National Center for Biotechnology Information) Protein sequence databases
Protein DataBank in Europe (PDBe)[14], ProteinDatabank in Japan (PDBj)[15], Research Collaboratory for Structural Bioinformatics (RCSB)[16] Protein Data Bank (PDB) Protein structure databases
Structural Classification of Proteins (SCOP) Protein structure databases
Protein Structure Classification database CATH : Protein structure databases
Sali Lab, UCSF ModBase database of comparative protein structure models Protein model databases
Similarity Matrix of Proteins SIMAP database of protein similarities computed using FASTA Protein model databases
Swiss-model server and repository for protein structure models Protein model databases
AAindex : database of amino acid indices, amino acid mutation matrices, and pair-wise contact potentials Protein model databases
Samuel Lunenfeld Research Institute BioGRID general repository for interaction datasets Protein-protein and other molecular interactions
RNA-binding protein databas Protein-protein and other molecular interactions
Univ. of California Database of Interacting Proteins Protein-protein and other molecular interactions
(EMBL-EBI) IntAct:[17] open-source database for molecular interactions Protein-protein and other molecular interactions
String an open source molecular interaction database to study interactions between proteins Protein-protein and other molecular interactions
Human Protein Atlas aims at mapping all the human proteins in cells, tissues and organs Protein expression databases
ProteinModelPortal Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase ?? ?? 3D structure protein databases
SMR Database of annotated 3D protein structure models University of Basel The Swiss goverment 3D structure protein databases
DisProt Database of Protein Disorder ELIXIR infrastructure Indiana University School of Medicine, Temple University, University of Padua funding from the European Union’s Horizon 2020 Swiss Prot/Uni Prot, CATH, Pfam, Europe PMC, BITEM, ECO, Geneontology DisProt database of experimental evidences of disorder in proteins 3D structure protein databases, Protein sequence databases
MobiDB Database of intrinsically disordered and mobile proteins John Moult, Christine Orengo, Predrag Radivojac University of Padua Italian Goverment MobiDB database of intrinsic protein disorder annotation 3D structure protein databases, Protein sequence databases
ModBase Database of Comparative Protein Structure Models Ursula Pieper, Ben Webb, Narayanan Eswar, Andrej Sali Roberto Sanchez UCSF, Sali Lab 3D structure protein databases
PDBsum Pictorial database of 3D structures in the Protein Data Bank European Bioinformatics Institute 2013 Wellcome Trust 3D structure protein databases
CCDS The Consensus CDS protein set database NCBI ?? Sequence databases
DDBJ DNA Data Bank of Japan ?? ?? Sequence databases
ENA European Nucleotide Archive ?? ?? Sequence databases
GenBank GenBank nucleotide sequence database ?? ?? Sequence databases
Refseq NCBI Reference Sequence Database ?? ?? Sequence databases
UniGene Database of computationally identifies transcripts from the same locus ?? ?? Sequence databases
UniProtKB Universal Protein Resource (UniProt) ?? ?? Sequence databases
Swiss Prot/Uni Prot https://www.sib.swiss/swiss-prot,https://www.uniprot.org/ SIB Swiss Institute of Bioinformatics European Bioinformatics Institute (EMBL-EBI) Swiss-Prot has collected over 81 000 variants in roughly 13,000 human protein sequence records from peer-reviewed literature. It is unclear how many unique proteins types are present in the database.

See also

References

  1. ^ "How Many Proteins Exist? (with pictures)". All the Science. 2023-05-26. Retrieved 2023-07-12.
  2. ^ "Is there are theoretical limit to the number of proteins possible and their respective structure?". Biology Stack Exchange. Retrieved 2023-07-12.
  3. ^ "How many different possible proteins, 300 amino acids in length, could exist?". Quora. Retrieved 2023-07-12.
  4. ^ "How can 20 different amino acids permit 75000 different proteins?". homework.study.com. Retrieved 2023-07-12.
  5. ^ Rosenberger G, Koh CC, Guo T, Röst HL, Kouvonen P, Collins BC, et al. (2014). "A repository of assays to quantify 10,000 human proteins by SWATH-MS". Scientific Data. 1: 140031. doi:10.1038/sdata.2014.31. PMC 4322573. PMID 25977788.
  6. ^ Jiang L, Wang M, Lin S, Jian R, Li X, Chan J, et al. (October 2020). "A Quantitative Proteome Map of the Human Body". Cell. 183 (1): 269–283.e19. doi:10.1016/j.cell.2020.08.036. PMC 7575058. PMID 32916130.
  7. ^ Avenue, 677 Huntington; Boston; Ma 02115 (2012-09-18). "Protein". The Nutrition Source. Retrieved 2023-07-12.{{cite web}}: CS1 maint: numeric names: authors list (link)
  8. ^ "What is a protein? | Precision Medicine - SIB". www.precisionmed.ch. 2019-07-19. Retrieved 2023-07-12.
  9. ^ "3.7: Proteins, Genes and Evolution- How Many Proteins are We?". Biology LibreTexts. 2019-01-04. Retrieved 2023-07-19.
  10. ^ Aebersold R, Agar JN, Amster IJ, Baker MS, Bertozzi CR, Boja ES, et al. (February 2018). "How many human proteoforms are there?". Nature Chemical Biology. 14 (3): 206–214. doi:10.1038/nchembio.2576. PMC 5837046. PMID 29443976.
  11. ^ Pray L (2008). "Eukaryotic genome complexity". Nature Education. 1 (1): 96.
  12. ^ Murín R, Schaer A, Kowtharapu BS, Verleysdonk S, Hamprecht B (May 2008). "Expression of 3-hydroxyisobutyrate dehydrogenase in cultured neural cells". Journal of Neurochemistry. 105 (4): 1176–1186. doi:10.1111/j.1471-4159.2008.05298.x. PMID 18284611.
  13. ^ https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686490/. {{cite web}}: Missing or empty |title= (help)
  14. ^ Mir S, Alhroub Y, Anyango S, Armstrong DR, Berrisford JM, Clark AR, et al. (January 2018). "PDBe: towards reusable data delivery infrastructure at protein data bank in Europe". Nucleic Acids Research. 46 (D1): D486–D492. doi:10.1093/nar/gkx1070. PMC 5753225. PMID 29126160.
  15. ^ Kinjo AR, Bekker GJ, Suzuki H, Tsuchiya Y, Kawabata T, Ikegawa Y, Nakamura H (January 2017). "Protein Data Bank Japan (PDBj): updated user interfaces, resource description framework, analysis tools for large structures". Nucleic Acids Research. 45 (D1): D282–D288. doi:10.1093/nar/gkw962. PMC 5210648. PMID 27789697.
  16. ^ Rose PW, Prlić A, Altunkaya A, Bi C, Bradley AR, Christie CH, et al. (January 2017). "The RCSB protein data bank: integrative view of protein, gene and 3D structural information". Nucleic Acids Research. 45 (D1): D271–D281. doi:10.1093/nar/gkw1000. PMC 5210513. PMID 27794042.
  17. ^ Hermjakob H, Montecchi-Palazzi L, Lewington C, Mudali S, Kerrien S, Orchard S, et al. (January 2004). "IntAct: an open source molecular interaction database". Nucleic Acids Research. 32 (Database issue): D452-5. doi:10.1093/nar/gkh052. PMC 308786. PMID 14681455.

Sources

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