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@AllenInstitute

Allen Institute

Please visit http://alleninstitute.github.io/ for more information.

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  1. AllenSDK AllenSDK Public

    code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook 355 152

  2. dipde dipde Public

    Numerical solver for coupled population density equations

    Python 24 14

Repositories

Showing 10 of 421 repositories
  • video_descriptive_statistics Public
    AllenInstitute/video_descriptive_statistics’s past year of commit activity
    Shell 0 0 0 0 Updated Mar 31, 2025
  • bmtk-workshop Public
    AllenInstitute/bmtk-workshop’s past year of commit activity
    Jupyter Notebook 4 8 2 0 Updated Mar 31, 2025
  • ET_connectivity Public

    Code used to analyze the connectivity of ET neurons in MICrONs dataset

    AllenInstitute/ET_connectivity’s past year of commit activity
    Jupyter Notebook 4 1 0 0 Updated Mar 30, 2025
  • MIES Public

    Multichannel Igor Electrophysiology Suite

    AllenInstitute/MIES’s past year of commit activity
    IGOR Pro 26 9 286 14 Updated Mar 30, 2025
  • microns_tutorial Public

    MICrONS databook and analysis tutorials

    AllenInstitute/microns_tutorial’s past year of commit activity
    Jupyter Notebook 2 2 0 0 Updated Mar 30, 2025
  • TEM_comms Public

    Pigeon messages for the next generation TEM imaging system

    AllenInstitute/TEM_comms’s past year of commit activity
    Python 1 BSD-3-Clause 2 1 0 Updated Mar 29, 2025
  • scrattch Public

    Single cell RNA-seq analysis for transcriptomic type characterization

    AllenInstitute/scrattch’s past year of commit activity
    R 36 3 0 0 Updated Mar 29, 2025
  • dynamic_routing_analysis Public

    Tools for accessing, processing and presenting data from Dynamic Routing experiments.

    AllenInstitute/dynamic_routing_analysis’s past year of commit activity
    Jupyter Notebook 2 0 0 0 Updated Mar 28, 2025
  • vis Public

    Typescript packages for building big-data visualization tools & components, with examples for a variety of common data types & formats

    AllenInstitute/vis’s past year of commit activity
    TypeScript 5 BSD-3-Clause 0 0 6 Updated Mar 28, 2025
  • jem Public

    Repository containing JEM (JSON Electrophysiology Metadata), a web-form for logging metadata during slice electrophysiology experiments.

    AllenInstitute/jem’s past year of commit activity
    HTML 3 3 0 0 Updated Mar 28, 2025
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