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LLM_learning Public
Scripts for LLM learning(Prompt engineering, RAG, and Fine-tuning)
Jupyter Notebook UpdatedOct 8, 2024 -
single-cell-algor Public
Single cell sequencing data analysis algorithms exploration
Python UpdatedAug 7, 2024 -
github_upload_test Public
This project is to show how to use github to upload your scripts
Python UpdatedJul 12, 2024 -
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Awesome-Reproducible-Analysis-of-Single-Cell-Papers Public
Forked from XuYuanchi/Awesome-Reproducible-Analysis-of-Single-Cell-PapersA curated list of awesome reproducible papers in single-cell omics
UpdatedMar 19, 2024 -
awesome-single-cell Public
Forked from seandavi/awesome-single-cellCommunity-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
MIT License UpdatedMar 18, 2024 -
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hlatools Public
This project is made for HLA(human leukocyte antigen) analysis
Python UpdatedMar 16, 2024 -
awesome-foundation-model-single-cell-papers Public
Forked from OmicsML/awesome-foundation-model-single-cell-papersMIT License UpdatedMar 7, 2024 -
scanpy_recipe Public
shortcut tools for scRNA-seq data analysis based on scanpy
Jupyter Notebook UpdatedNov 10, 2023 -
novoalgor Public
An innovative algorithmic for single-cell celltype assignment and visualization
Jupyter Notebook UpdatedMay 24, 2023 -
celltypist Public
Forked from Teichlab/celltypistA tool for semi-automatic cell type annotation
Python MIT License UpdatedJan 30, 2023 -
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training-collection Public
Forked from sib-swiss/training-collectionCollection of bioinformatics training materials
Other UpdatedAug 18, 2022 -
python_best_practice Public
Best practices when using python to basic usage,data science or web building
Python MIT License UpdatedOct 10, 2021 -
SingleCell-Workshop-2021 Public
Forked from StatBiomed/SingleCell-Workshop-2021Module 4 for HKU Single-cell Workshop
HTML UpdatedJul 6, 2021 -
infercnvpy Public
Forked from icbi-lab/infercnvpyInfer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy.
Python BSD 3-Clause "New" or "Revised" License UpdatedFeb 8, 2021 -
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bioinformatic_practices Public
Common exercises of bioinformatics mainly about Sequncing tech and data analysis
Python UpdatedJan 12, 2020 -
Linux_code_examples Public
Records of commonly and effectively Linux commands and scripts with active examples
UpdatedOct 10, 2019 -
VariantsVisulization Public
Plotting Variants(snv,indel,CNV,SV) called in Next Generation Sequencing(NGS)or Third Generation Sequencing
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Virgilio Public
Forked from virgili0/VirgilioYour new Mentor for Data Science E-Learning.
Jupyter Notebook Other UpdatedAug 26, 2019 -
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bcftools Public
Forked from samtools/bcftoolsThis is the official development repository for BCFtools. To compile, the develop branch of htslib is needed: git clone --branch=develop git://github.com/samtools/htslib.git htslib
C Other UpdatedJun 4, 2019 -
samtools Public
Forked from samtools/samtoolsTools (written in C using htslib) for manipulating next-generation sequencing data
C Other UpdatedMay 31, 2019 -
Awesome-Bioinformatics Public
Forked from danielecook/Awesome-BioinformaticsA curated list of awesome Bioinformatics libraries and software.
UpdatedMay 31, 2019 -
howdoi Public
Forked from gleitz/howdoiinstant coding answers via the command line
Python MIT License UpdatedMay 23, 2019