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Pull requests: StaPH-B/docker-builds

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Pull requests list

Link htslib to libdeflate, improving performance.
#1022 opened Jul 18, 2024 by pettyalex Loading…
1 of 9 tasks
Link samtools against libdeflate for improved performance.
#1021 opened Jul 18, 2024 by pettyalex Loading…
9 tasks
Enable GCS, S3, and libdeflate support for bcftools
#1019 opened Jul 9, 2024 by pettyalex Loading…
6 of 9 tasks
adding assembly_snptyper version 0.1.1
#1016 opened Jul 1, 2024 by erinyoung Loading…
9 tasks done
adding iqtree2 version 2.3.5
#1015 opened Jul 1, 2024 by erinyoung Loading…
9 tasks done
adding usher version 0.6.3
#1014 opened Jun 28, 2024 by erinyoung Draft
8 of 9 tasks
updating freebayes to 1.3.8
#975 opened May 14, 2024 by erinyoung Draft
3 of 8 tasks
adding virulencefinder version 3.0.0
#927 opened Mar 21, 2024 by erinyoung Loading…
9 tasks done
adding masurca version 4.1.1
#908 opened Mar 14, 2024 by erinyoung Draft
9 tasks done
adding medaka version 1.11.2
#799 opened Nov 15, 2023 by erinyoung Draft
9 tasks done
Add ncov-recombinant v0.6.1 APHL Docker Workshop workshop Part of a training workshop
#583 opened Feb 7, 2023 by whottel Loading…
2 tasks
Nullarbor
#400 opened Jun 28, 2022 by frankambrosio3 Draft
8 of 9 tasks
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