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@biosustain

DTU Biosustain

The Novo Nordisk Foundation Center for Biosustainability

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  1. potion potion Public

    Flask-Potion is a RESTful API framework for Flask and SQLAlchemy, Peewee or MongoEngine

    Python 488 51

  2. cameo cameo Public

    cameo - computer aided metabolic engineering & optimization

    Python 113 42

  3. shu shu Public

    Multi-dimensional, trans-omics metabolic maps.

    Rust 43 1

  4. croissance croissance Public

    Tool for estimating growth rates from microbial growth curves

    Python 27 13

  5. Maud Maud Public

    Enzyme models that take into account kinetics, allostery and thermodynamics

    Python 26 2

  6. snakemake_UmetaFlow snakemake_UmetaFlow Public

    Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake

    Python 24 7

Repositories

Showing 10 of 116 repositories
  • pankb_llm Public

    An LLM-based pangenomics chatbot integrated into the PanKB website.

    biosustain/pankb_llm’s past year of commit activity
    Python 0 0 0 0 Updated Oct 10, 2024
  • pankb_db Public
    biosustain/pankb_db’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 10, 2024
  • pankb Public

    The Pangenome Knowledge Base (PanKB) serves as an up-to-date resource for pangenomics research methods and the dissemination of results and currently offers basic pangenome characteristics and advanced pangenome analytics for 8 major biotech bacteria families.

    biosustain/pankb’s past year of commit activity
    HTML 1 MIT 0 0 0 Updated Oct 10, 2024
  • pankb_data_prep Public
    biosustain/pankb_data_prep’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 7, 2024
  • dsp_workshop_datavizR Public

    Introduction to Data Visualization: Theory and practice using R

    biosustain/dsp_workshop_datavizR’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Oct 4, 2024
  • notes_template Public template Forked from enryH/notes_template

    Notes template build on Sphinx, Myst parser and a template

    biosustain/notes_template’s past year of commit activity
    Python 0 GPL-3.0 1 0 0 Updated Oct 4, 2024
  • dsp_notes_template_test Public

    Example template testing for course

    biosustain/dsp_notes_template_test’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Oct 3, 2024
  • Alleleome Public

    Tools to generate core- and panalleleomes.

    biosustain/Alleleome’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 2, 2024
  • dsp_pandas Public

    Organize pandas based functionality across projects.

    biosustain/dsp_pandas’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Sep 27, 2024
  • dsp_notes Public

    Public notes and hints of the Data Science Platform.

    biosustain/dsp_notes’s past year of commit activity
    Jupyter Notebook 1 1 0 0 Updated Sep 23, 2024
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