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196 followers · 8 following

Achievements

Achievement: Pair Extraordinairex3Achievement: YOLOAchievement: Starstruckx2Achievement: Pull Sharkx3Achievement: Arctic Code Vault Contributor

Achievements

Achievement: Pair Extraordinairex3Achievement: YOLOAchievement: Starstruckx2Achievement: Pull Sharkx3Achievement: Arctic Code Vault Contributor

Highlights

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Organizations

@commontk @Slicer @vmtk @QIICR @interactivemedical @OHIF @Radiomics @ImagingDataCommons @canceridc @lnq-org @cppjs-dev

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  • MorphoDepotDocs Public

    Experiment creating documentation slides for MorphoDepot

    MIT License Updated Oct 9, 2024

  • Slicer Public

    Forked from Slicer/Slicer

    Multi-platform, free open source software for visualization and image computing.

    C++ 1 Other Updated Oct 8, 2024

  • SlicerMorphoDepot Public

    Experiments and implementations related to the SlicerMorph MorphoDepot project

    Python Apache License 2.0 Updated Oct 8, 2024

  • MD_E15 Public

    Forked from SlicerMorph/MD_E15

    My fork of a MorphoDepo example repository

    morphodepot md-species-mus-musculus
    1 2 Updated Oct 7, 2024

  • Viewers Public

    Forked from OHIF/Viewers

    OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages

    JavaScript MIT License Updated Aug 16, 2024

  • SegmentRegistration Public

    Forked from SlicerRt/SegmentRegistration

    3D Slicer extension for segment registration (aka fusion, contour propagation)

    Python Other Updated Aug 15, 2024

  • SlicerSOFA Public

    Forked from Slicer/SlicerSOFA

    3D Slicer extension to enable simulations using the SOFA framework

    Python 1 Updated Jul 10, 2024

  • dicomsort Public

    A project to provide custom sorting and renaming of dicom files

    Python 74 23 Other Updated Jul 6, 2024

  • SlicerEditor Public

    Experiments with embedding a text editor in Slicer

    HTML 1 Other Updated Jul 1, 2024

  • SlicerUltrasound Public

    Forked from SlicerUltrasound/SlicerUltrasound

    Modules for 3D Slicer

    Python MIT License Updated Jun 20, 2024

  • SlicerWGPU Public

    Use wgpu, a rust-python WebGPU implementation, in 3D Slicer

    Python 6 Updated Apr 7, 2024

  • Notebooks Public

    Repo for saving jupyter notebooks (e.g. from colab)

    Jupyter Notebook 1 Apache License 2.0 Updated Mar 29, 2024

  • wgpu Public

    Forked from gfx-rs/wgpu

    Cross-platform, safe, pure-rust graphics api.

    Rust Apache License 2.0 Updated Mar 17, 2024

  • SlicerParallelProcessing Public

    Slicer modules for running subprocesses to operate on data in parallel

    Python 11 5 Other Updated Feb 23, 2024

  • SlicerImageStacks Public archive

    Scripted utility to load image stacks (e.g. confocal microscopy) more easily

    Python 3 Other Updated Feb 22, 2024

  • SlicerGetFEM Public

    Interface between 3D Slicer and the GetFEM multiphysics system

    Python 1 Updated Jan 29, 2024

  • SleepEEGSynthSeg Public

    Scripts from martinos machine related to the Human Sleep Project EEG/MRI study in 2022-2023

    Python Apache License 2.0 Updated Jan 21, 2024

  • open-source-at-harvard Public

    Forked from IQSS/open-source-at-harvard

    Listing and exploring open source software written at Harvard

    Go Updated Jan 10, 2024

  • SlicerHeart Public

    Forked from SlicerHeart/SlicerHeart

    3D Slicer extension for cardiac analysis

    Python BSD 3-Clause "New" or "Revised" License Updated Jan 5, 2024

  • opw_regulatory Public

    Forked from OpenwaterHealth/opw_regulatory

    Repository of files with communication to/from the FDA

    GNU Affero General Public License v3.0 Updated Dec 18, 2023

  • SlicerDMRI Public

    Forked from SlicerDMRI/SlicerDMRI

    Diffusion MRI analysis and visualization in 3D Slicer open source medical imaging platform.

    C++ Other Updated Dec 14, 2023

  • CTK Public

    Forked from commontk/CTK

    A set of common support code for medical imaging, surgical navigation, and related purposes.

    C++ 4 3 Apache License 2.0 Updated Dec 13, 2023

  • DICOMLogic Public

    Essential logic for working with dicom data.

    Python MIT License Updated Dec 9, 2023

  • getfem Public

    Forked from getfem/getfem

    Mirror of GetFEM repository

    C++ Other Updated Nov 21, 2023

  • DICOMParts Public

    A python package of parts for working with dicom

    Python MIT License Updated Oct 25, 2023

  • VTK Public

    Forked from Slicer/VTK

    Visualization Toolkit

    C++ Other Updated Oct 10, 2023

  • nnmouse Public

    Sample scripts for training nnU-Net on mouse fetus data

    Python 1 1 Apache License 2.0 Updated Oct 6, 2023

  • CompareVolumes Public

    Slicer module providing high level layout and visualization options

    Python 2 16 Other Updated Aug 21, 2023

  • pygfx Public

    Forked from pygfx/pygfx

    A python render engine running on wgpu.

    Python BSD 2-Clause "Simplified" License Updated Aug 12, 2023

  • wgpu-py Public

    Forked from pygfx/wgpu-py

    Next generation GPU API for Python

    Python BSD 2-Clause "Simplified" License Updated Jul 6, 2023