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SelfDecode

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  1. rd-imputation-accuracy rd-imputation-accuracy Public

    Phasing and genotype Imputation comparison. Have been evaluated: BEAGLE 5.4, EAGLE 2.4.1, SHAPEIT 4, MINIMAC 4, IMPUTE 5, using accuracy metrics like: IQS(Imputation Quality score), r2 (Pearson cor…

    Python 21 4

  2. rd-eztraits rd-eztraits Public

    Calculating trait score

    C++ 19 1

  3. snps snps Public

    Forked from apriha/snps

    tools for reading, writing, merging, and remapping SNPs

    Python 2

  4. htslib htslib Public archive

    Forked from SelfHacked/htslib

    C library for high-throughput sequencing data formats

    C

  5. devtools devtools Public archive

    Forked from SelfHacked/devtools

    Tools to make an R developer's life easier

    R

  6. bcftools bcftools Public archive

    Forked from SelfHacked/bcftools

    This is the official development repository for BCFtools. To compile, the develop branch of htslib is needed: git clone --branch=develop git://github.com/samtools/htslib.git htslib

    C

Repositories

Showing 10 of 42 repositories
  • gwas2vcf Public Forked from MRCIEU/gwas2vcf

    Convert GWAS summary statistics to VCF. Forked project

    selfdecode/gwas2vcf’s past year of commit activity
    Python 0 MIT 16 0 0 Updated Jul 19, 2024
  • gtc-to-vcf Public Forked from Illumina/GTCtoVCF

    Script to convert GTC/BPM files to VCF

    selfdecode/gtc-to-vcf’s past year of commit activity
    Python 0 Apache-2.0 30 0 0 Updated Jul 11, 2024
  • snps Public Forked from apriha/snps

    tools for reading, writing, merging, and remapping SNPs

    selfdecode/snps’s past year of commit activity
    Python 2 BSD-3-Clause 19 0 4 Updated Jul 6, 2024
  • SumStatsRehab Public Forked from Kukuster/SumStatsRehab

    GWAS summary statistics files QC tool

    selfdecode/SumStatsRehab’s past year of commit activity
    Python 0 MIT 6 0 1 Updated May 21, 2024
  • django-oidc-provider Public Forked from SelfHacked/django-oidc-provider

    OpenID Connect and OAuth2 provider implementation for Djangonauts.

    selfdecode/django-oidc-provider’s past year of commit activity
    Python 0 MIT 242 0 0 Updated Mar 1, 2024
  • rd-imputation-accuracy Public

    Phasing and genotype Imputation comparison. Have been evaluated: BEAGLE 5.4, EAGLE 2.4.1, SHAPEIT 4, MINIMAC 4, IMPUTE 5, using accuracy metrics like: IQS(Imputation Quality score), r2 (Pearson correlation), Concordance.

    selfdecode/rd-imputation-accuracy’s past year of commit activity
    Python 21 MIT 4 0 0 Updated Feb 29, 2024
  • rd-eztraits Public

    Calculating trait score

    selfdecode/rd-eztraits’s past year of commit activity
    C++ 19 MIT 1 0 0 Updated Feb 29, 2024
  • mozilla-django-oidc Public Forked from mozilla/mozilla-django-oidc

    A django OpenID Connect library

    selfdecode/mozilla-django-oidc’s past year of commit activity
    Python 0 MPL-2.0 174 0 0 Updated Nov 8, 2023
  • PUMAS Public Forked from qlu-lab/PUMAS

    Fine-tuning polygenic risk score models using GWAS summary statistics. Forked project

    selfdecode/PUMAS’s past year of commit activity
    R 0 MIT 11 0 0 Updated Nov 8, 2023
  • ssosync_old Public archive

    Populate AWS SSO directly with your G Suite users and groups using either a CLI or AWS Lambda

    selfdecode/ssosync_old’s past year of commit activity
    Go 0 Apache-2.0 0 0 0 Updated Feb 6, 2023
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