Models of SEIRS epidemic dynamics with extensions, including network-structured populations, testing, contact tracing, and social distancing.
COVID-19 Hospital Impact Model for Epidemics
SORMAS (Surveillance, Outbreak Response Management and Analysis System) is an early warning and management system to fight the spread of infectious diseases.
This repository contains data and code used to get and clean data from https://github.com/CSSEGISandData/COVID-19 and https://www.worldometers.info/coronavirus/
Network Diffusion Library - (for NetworkX and iGraph)
Open-source repository containing examples and documentation for the Cognizant XPRIZE Pandemic Response Challenge
Mathematical Modeling of Infectious Disease Dynamics
Spatiotemporal epidemic model introduced in the context of COVID-19, ACM TSAS, 2022
Python toolbox to evaluate graph vulnerability and robustness (CIKM 2021)
Disease propagation ABM generating SIR, severe cases, and R0 over quasi-time.
An R package with over 50 highly cited, read-to-use, up-to-date COVID-19 pandemic data resources
Source code for the EpiEstim app.
Simulation, visualization, and inference of individual level infectious disease models with Julia
Microscopic Markov Chain Approach to model the spreading of COVID-19
Python package to estimate the time-varying effective reproduction number of an epidemic from reported case numbers
COVID-19 spread shiny dashboard with a forecasting model, countries' trajectories graphs, and cluster analysis tools
Temporal networks in Python. Provides fast tools to analyze temporal contact networks and simulate dynamic processes on them using Gillespie's SSA.
Network Diffusion Library REST Service
Homework and exercises from course Network Dynamics and Learning - PoliTo
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