Python library to handle Gene Ontology (GO) terms
Gene set variation analysis
Differential expression analysis for single-cell RNA-seq data.
Testing, development environment for a new project of KN BIBS
Gene Set Clustering based on Functional annotation
piano - An R/Bioconductor package for gene set analysis
A Tidy Framework to Hack Gene Expression Signatures
This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.
Julia implementation of the next generation GSEA 🏔️
mulea - an R package for enrichment analysis using various ontologies and empirical false discovery rate
Experimental version of data package associated with chipenrich
Flexible gene set enrichment analysis
Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)
A Snakemake workflow and MrBiomics module for performing genomic region set and gene set enrichment analyses using LOLA, GREAT, GSEApy, pycisTarget and RcisTarget.
Package to gather gene information, annotations, and functions
DBRetina python package
Integration of pathway-related information from MSigDB in BEL
Assessing dIfferential expression, dispersion, distribution analyses on TCGA tumour-normal RNA-seq datasets
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